ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1VQM:02505:02504

Extra

PDB:
ATOM 1 O3' U A2504 16.530 144.063 122.139 1.00 59.00 O
ATOM 2 P A A2505 15.366 145.100 122.524 1.00 61.36 P
ATOM 3 OP1 A A2505 15.951 146.194 123.337 1.00 60.85 O
ATOM 4 OP2 A A2505 14.260 144.286 123.072 1.00 63.31 O
ATOM 5 O5' A A2505 14.900 145.691 121.121 1.00 66.07 O
ATOM 6 C5' A A2505 13.752 146.559 121.006 1.00 71.91 C
ATOM 7 C4' A A2505 14.140 147.831 120.289 1.00 76.71 C
ATOM 8 O4' A A2505 14.998 148.603 121.157 1.00 78.50 O
ATOM 9 C3' A A2505 14.981 147.631 119.034 1.00 80.29 C
ATOM 10 O3' A A2505 14.149 147.358 117.889 1.00 81.91 O
ATOM 11 C2' A A2505 15.745 148.949 118.904 1.00 81.61 C
ATOM 12 O2' A A2505 15.034 149.939 118.183 1.00 84.98 O
ATOM 13 C1' A A2505 15.871 149.388 120.368 1.00 81.28 C
ATOM 14 N9 A A2505 17.197 149.395 120.989 1.00 81.92 N
ATOM 15 C8 A A2505 17.700 148.535 121.938 1.00 81.39 C
ATOM 16 N7 A A2505 18.894 148.863 122.368 1.00 81.31 N
ATOM 17 C5 A A2505 19.209 150.003 121.641 1.00 82.29 C
ATOM 18 C6 A A2505 20.339 150.846 121.641 1.00 82.19 C
ATOM 19 N6 A A2505 21.392 150.674 122.443 1.00 81.76 N
ATOM 20 N1 A A2505 20.345 151.888 120.780 1.00 82.81 N
ATOM 21 C2 A A2505 19.280 152.071 119.987 1.00 83.12 C
ATOM 22 N3 A A2505 18.157 151.358 119.903 1.00 83.21 N
ATOM 23 C4 A A2505 18.185 150.327 120.768 1.00 82.65 C
TER

ATOM 1 O3' G B2503 17.888 144.103 116.046 1.00 50.15 O
ATOM 2 P U B2504 16.830 144.893 116.964 1.00 51.86 P
ATOM 3 OP1 U B2504 15.553 144.154 116.831 1.00 50.09 O
ATOM 4 OP2 U B2504 16.879 146.346 116.652 1.00 49.52 O
ATOM 5 O5' U B2504 17.368 144.693 118.450 1.00 49.88 O
ATOM 6 C5' U B2504 17.340 143.400 119.078 1.00 50.78 C
ATOM 7 C4' U B2504 18.096 143.440 120.380 1.00 52.53 C
ATOM 8 O4' U B2504 19.483 143.770 120.114 1.00 52.40 O
ATOM 9 C3' U B2504 17.648 144.503 121.374 1.00 53.61 C
ATOM 10 O3' U B2504 16.530 144.063 122.139 1.00 59.00 O
ATOM 11 C2' U B2504 18.892 144.680 122.233 1.00 51.96 C
ATOM 12 O2' U B2504 19.055 143.653 123.192 1.00 50.86 O
ATOM 13 C1' U B2504 19.996 144.555 121.181 1.00 49.99 C
ATOM 14 N1 U B2504 20.420 145.861 120.655 1.00 46.72 N
ATOM 15 C2 U B2504 21.406 146.518 121.348 1.00 46.03 C
ATOM 16 O2 U B2504 21.932 146.048 122.333 1.00 47.30 O
ATOM 17 N3 U B2504 21.754 147.745 120.845 1.00 46.30 N
ATOM 18 C4 U B2504 21.227 148.363 119.730 1.00 46.12 C
ATOM 19 O4 U B2504 21.641 149.475 119.401 1.00 47.31 O
ATOM 20 C5 U B2504 20.218 147.612 119.056 1.00 44.48 C
ATOM 21 C6 U B2504 19.857 146.417 119.529 1.00 43.61 C
ATOM 22 P A B2505 15.366 145.100 122.524 1.00 61.36 P
ATOM 23 OP1 A B2505 15.951 146.194 123.337 1.00 60.85 O
ATOM 24 OP2 A B2505 14.260 144.286 123.072 1.00 63.31 O
ATOM 25 O5' A B2505 14.900 145.691 121.121 1.00 66.07 O
TER

Atoms:
OP1: (15.951,146.194,123.337)
OP2: (14.260,144.286,123.072)
C3': (14.981,147.631,119.034)
C1': (15.871,149.388,120.368)
C5': (13.752,146.559,121.006)
O4': (14.998,148.603,121.157)
C8: (17.700,148.535,121.938)
O2': (15.034,149.939,118.183)
C6: (20.339,150.846,121.641)
C5: (19.209,150.003,121.641)
C4: (18.185,150.327,120.768)
P: (15.366,145.100,122.524)
C4': (14.140,147.831,120.289)
C2': (15.745,148.949,118.904)
C2: (19.280,152.071,119.987)
N1: (20.345,151.888,120.780)
N3: (18.157,151.358,119.903)
N6: (21.392,150.674,122.443)
N7: (18.894,148.863,122.368)
N9: (17.197,149.395,120.989)
O5': (14.900,145.691,121.121)
O3': (14.149,147.358,117.889)
C4: (21.227,148.363,119.730)
N3: (21.754,147.745,120.845)
OP1: (15.553,144.154,116.831)
OP2: (16.879,146.346,116.652)
C2: (21.406,146.518,121.348)
C1': (19.996,144.555,121.181)
C3': (17.648,144.503,121.374)
O5': (17.368,144.693,118.450)
O4': (19.483,143.770,120.114)
C5': (17.340,143.400,119.078)
P: (16.830,144.893,116.964)
C4': (18.096,143.440,120.380)
C2': (18.892,144.680,122.233)
O2': (19.055,143.653,123.192)
N1: (20.420,145.861,120.655)
O4: (21.641,149.475,119.401)
O2: (21.932,146.048,122.333)
C6: (19.857,146.417,119.529)
C5: (20.218,147.612,119.056)
O3': (16.530,144.063,122.139)
Image (generated by PyMOL):
PyMOL image
show in jmol