Doublet info:
Details
Nucleotide types:
GC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1T0D:A12:A13
Extra
PDB:
ATOM 1 O3' C A 11 6.494 -13.605 -8.236 1.00 27.82 O
ATOM 2 P G A 12 7.324 -14.931 -7.896 1.00 23.97 P
ATOM 3 OP1 G A 12 8.359 -14.911 -8.956 1.00 24.35 O
ATOM 4 OP2 G A 12 6.434 -16.105 -7.758 1.00 25.55 O
ATOM 5 O5' G A 12 8.041 -14.642 -6.505 1.00 24.02 O
ATOM 6 C5' G A 12 7.969 -15.589 -5.444 1.00 23.94 C
ATOM 7 C4' G A 12 8.630 -15.039 -4.201 1.00 22.15 C
ATOM 8 O4' G A 12 7.986 -13.800 -3.804 1.00 20.61 O
ATOM 9 C3' G A 12 8.514 -15.934 -2.980 1.00 23.17 C
ATOM 10 O3' G A 12 9.553 -16.904 -3.009 1.00 24.28 O
ATOM 11 C2' G A 12 8.680 -14.927 -1.851 1.00 22.89 C
ATOM 12 O2' G A 12 10.019 -14.496 -1.716 1.00 21.03 O
ATOM 13 C1' G A 12 7.872 -13.751 -2.393 1.00 21.01 C
ATOM 14 N9 G A 12 6.452 -13.769 -2.044 1.00 20.62 N
ATOM 15 C8 G A 12 5.393 -13.973 -2.894 1.00 19.07 C
ATOM 16 N7 G A 12 4.234 -13.913 -2.294 1.00 19.37 N
ATOM 17 C5 G A 12 4.543 -13.656 -0.966 1.00 19.91 C
ATOM 18 C6 G A 12 3.694 -13.484 0.162 1.00 21.05 C
ATOM 19 O6 G A 12 2.450 -13.524 0.217 1.00 22.40 O
ATOM 20 N1 G A 12 4.427 -13.237 1.314 1.00 19.69 N
ATOM 21 C2 G A 12 5.795 -13.157 1.377 1.00 20.37 C
ATOM 22 N2 G A 12 6.319 -12.873 2.585 1.00 17.71 N
ATOM 23 N3 G A 12 6.595 -13.328 0.338 1.00 19.67 N
ATOM 24 C4 G A 12 5.908 -13.568 -0.792 1.00 20.41 C
ATOM 25 P C A 13 9.310 -18.363 -2.382 1.00 27.06 P
ATOM 26 OP1 C A 13 10.531 -19.154 -2.695 1.00 27.21 O
ATOM 27 OP2 C A 13 7.971 -18.895 -2.765 1.00 26.96 O
ATOM 28 O5' C A 13 9.314 -18.098 -0.818 1.00 24.62 O
TER
ATOM 1 O3' G B 12 9.553 -16.904 -3.009 1.00 24.28 O
ATOM 2 P C B 13 9.310 -18.363 -2.382 1.00 27.06 P
ATOM 3 OP1 C B 13 10.531 -19.154 -2.695 1.00 27.21 O
ATOM 4 OP2 C B 13 7.971 -18.895 -2.765 1.00 26.96 O
ATOM 5 O5' C B 13 9.314 -18.098 -0.818 1.00 24.62 O
ATOM 6 C5' C B 13 10.504 -17.690 -0.163 1.00 22.62 C
ATOM 7 C4' C B 13 10.230 -17.438 1.293 1.00 21.77 C
ATOM 8 O4' C B 13 9.290 -16.333 1.415 1.00 23.37 O
ATOM 9 C3' C B 13 9.535 -18.560 2.041 1.00 21.63 C
ATOM 10 O3' C B 13 10.430 -19.586 2.446 1.00 20.90 O
ATOM 11 C2' C B 13 8.956 -17.798 3.219 1.00 20.44 C
ATOM 12 O2' C B 13 9.978 -17.375 4.101 1.00 19.56 O
ATOM 13 C1' C B 13 8.420 -16.562 2.510 1.00 19.73 C
ATOM 14 N1 C B 13 7.049 -16.712 1.987 1.00 19.05 N
ATOM 15 C2 C B 13 5.971 -16.448 2.842 1.00 18.51 C
ATOM 16 O2 C B 13 6.201 -16.196 4.031 1.00 18.88 O
ATOM 17 N3 C B 13 4.709 -16.482 2.353 1.00 18.20 N
ATOM 18 C4 C B 13 4.502 -16.786 1.072 1.00 18.48 C
ATOM 19 N4 C B 13 3.247 -16.760 0.624 1.00 17.57 N
ATOM 20 C5 C B 13 5.578 -17.118 0.191 1.00 17.51 C
ATOM 21 C6 C B 13 6.824 -17.069 0.687 1.00 15.83 C
ATOM 22 P U B 14 9.902 -21.103 2.545 1.00 24.13 P
ATOM 23 OP1 U B 14 11.097 -21.943 2.819 1.00 23.58 O
ATOM 24 OP2 U B 14 9.033 -21.418 1.383 1.00 22.33 O
ATOM 25 O5' U B 14 8.951 -21.114 3.824 1.00 23.20 O
TER
ATOM 2 P G A 12 7.324 -14.931 -7.896 1.00 23.97 P
ATOM 3 OP1 G A 12 8.359 -14.911 -8.956 1.00 24.35 O
ATOM 4 OP2 G A 12 6.434 -16.105 -7.758 1.00 25.55 O
ATOM 5 O5' G A 12 8.041 -14.642 -6.505 1.00 24.02 O
ATOM 6 C5' G A 12 7.969 -15.589 -5.444 1.00 23.94 C
ATOM 7 C4' G A 12 8.630 -15.039 -4.201 1.00 22.15 C
ATOM 8 O4' G A 12 7.986 -13.800 -3.804 1.00 20.61 O
ATOM 9 C3' G A 12 8.514 -15.934 -2.980 1.00 23.17 C
ATOM 10 O3' G A 12 9.553 -16.904 -3.009 1.00 24.28 O
ATOM 11 C2' G A 12 8.680 -14.927 -1.851 1.00 22.89 C
ATOM 12 O2' G A 12 10.019 -14.496 -1.716 1.00 21.03 O
ATOM 13 C1' G A 12 7.872 -13.751 -2.393 1.00 21.01 C
ATOM 14 N9 G A 12 6.452 -13.769 -2.044 1.00 20.62 N
ATOM 15 C8 G A 12 5.393 -13.973 -2.894 1.00 19.07 C
ATOM 16 N7 G A 12 4.234 -13.913 -2.294 1.00 19.37 N
ATOM 17 C5 G A 12 4.543 -13.656 -0.966 1.00 19.91 C
ATOM 18 C6 G A 12 3.694 -13.484 0.162 1.00 21.05 C
ATOM 19 O6 G A 12 2.450 -13.524 0.217 1.00 22.40 O
ATOM 20 N1 G A 12 4.427 -13.237 1.314 1.00 19.69 N
ATOM 21 C2 G A 12 5.795 -13.157 1.377 1.00 20.37 C
ATOM 22 N2 G A 12 6.319 -12.873 2.585 1.00 17.71 N
ATOM 23 N3 G A 12 6.595 -13.328 0.338 1.00 19.67 N
ATOM 24 C4 G A 12 5.908 -13.568 -0.792 1.00 20.41 C
ATOM 25 P C A 13 9.310 -18.363 -2.382 1.00 27.06 P
ATOM 26 OP1 C A 13 10.531 -19.154 -2.695 1.00 27.21 O
ATOM 27 OP2 C A 13 7.971 -18.895 -2.765 1.00 26.96 O
ATOM 28 O5' C A 13 9.314 -18.098 -0.818 1.00 24.62 O
TER
ATOM 1 O3' G B 12 9.553 -16.904 -3.009 1.00 24.28 O
ATOM 2 P C B 13 9.310 -18.363 -2.382 1.00 27.06 P
ATOM 3 OP1 C B 13 10.531 -19.154 -2.695 1.00 27.21 O
ATOM 4 OP2 C B 13 7.971 -18.895 -2.765 1.00 26.96 O
ATOM 5 O5' C B 13 9.314 -18.098 -0.818 1.00 24.62 O
ATOM 6 C5' C B 13 10.504 -17.690 -0.163 1.00 22.62 C
ATOM 7 C4' C B 13 10.230 -17.438 1.293 1.00 21.77 C
ATOM 8 O4' C B 13 9.290 -16.333 1.415 1.00 23.37 O
ATOM 9 C3' C B 13 9.535 -18.560 2.041 1.00 21.63 C
ATOM 10 O3' C B 13 10.430 -19.586 2.446 1.00 20.90 O
ATOM 11 C2' C B 13 8.956 -17.798 3.219 1.00 20.44 C
ATOM 12 O2' C B 13 9.978 -17.375 4.101 1.00 19.56 O
ATOM 13 C1' C B 13 8.420 -16.562 2.510 1.00 19.73 C
ATOM 14 N1 C B 13 7.049 -16.712 1.987 1.00 19.05 N
ATOM 15 C2 C B 13 5.971 -16.448 2.842 1.00 18.51 C
ATOM 16 O2 C B 13 6.201 -16.196 4.031 1.00 18.88 O
ATOM 17 N3 C B 13 4.709 -16.482 2.353 1.00 18.20 N
ATOM 18 C4 C B 13 4.502 -16.786 1.072 1.00 18.48 C
ATOM 19 N4 C B 13 3.247 -16.760 0.624 1.00 17.57 N
ATOM 20 C5 C B 13 5.578 -17.118 0.191 1.00 17.51 C
ATOM 21 C6 C B 13 6.824 -17.069 0.687 1.00 15.83 C
ATOM 22 P U B 14 9.902 -21.103 2.545 1.00 24.13 P
ATOM 23 OP1 U B 14 11.097 -21.943 2.819 1.00 23.58 O
ATOM 24 OP2 U B 14 9.033 -21.418 1.383 1.00 22.33 O
ATOM 25 O5' U B 14 8.951 -21.114 3.824 1.00 23.20 O
TER
Atoms:
OP1: (8.359,-14.911,-8.956)
OP2: (6.434,-16.105,-7.758)
C3': (8.514,-15.934,-2.980)
C1': (7.872,-13.751,-2.393)
C5': (7.969,-15.589,-5.444)
O6: (2.450,-13.524,0.217)
O4': (7.986,-13.800,-3.804)
C8: (5.393,-13.973,-2.894)
C2: (5.795,-13.157,1.377)
C6: (3.694,-13.484,0.162)
C5: (4.543,-13.656,-0.966)
C4: (5.908,-13.568,-0.792)
P: (7.324,-14.931,-7.896)
C4': (8.630,-15.039,-4.201)
C2': (8.680,-14.927,-1.851)
O2': (10.019,-14.496,-1.716)
N1: (4.427,-13.237,1.314)
N2: (6.319,-12.873,2.585)
N3: (6.595,-13.328,0.338)
N7: (4.234,-13.913,-2.294)
N9: (6.452,-13.769,-2.044)
O5': (8.041,-14.642,-6.505)
O3': (9.553,-16.904,-3.009)
OP2: (6.434,-16.105,-7.758)
C3': (8.514,-15.934,-2.980)
C1': (7.872,-13.751,-2.393)
C5': (7.969,-15.589,-5.444)
O6: (2.450,-13.524,0.217)
O4': (7.986,-13.800,-3.804)
C8: (5.393,-13.973,-2.894)
C2: (5.795,-13.157,1.377)
C6: (3.694,-13.484,0.162)
C5: (4.543,-13.656,-0.966)
C4: (5.908,-13.568,-0.792)
P: (7.324,-14.931,-7.896)
C4': (8.630,-15.039,-4.201)
C2': (8.680,-14.927,-1.851)
O2': (10.019,-14.496,-1.716)
N1: (4.427,-13.237,1.314)
N2: (6.319,-12.873,2.585)
N3: (6.595,-13.328,0.338)
N7: (4.234,-13.913,-2.294)
N9: (6.452,-13.769,-2.044)
O5': (8.041,-14.642,-6.505)
O3': (9.553,-16.904,-3.009)
C2: (5.971,-16.448,2.842)
OP1: (10.531,-19.154,-2.695)
OP2: (7.971,-18.895,-2.765)
C4: (4.502,-16.786,1.072)
O5': (9.314,-18.098,-0.818)
C3': (9.535,-18.560,2.041)
C1': (8.420,-16.562,2.510)
O4': (9.290,-16.333,1.415)
C5': (10.504,-17.690,-0.163)
P: (9.310,-18.363,-2.382)
O2: (6.201,-16.196,4.031)
C4': (10.230,-17.438,1.293)
C2': (8.956,-17.798,3.219)
O2': (9.978,-17.375,4.101)
N1: (7.049,-16.712,1.987)
N3: (4.709,-16.482,2.353)
N4: (3.247,-16.760,0.624)
C6: (6.824,-17.069,0.687)
C5: (5.578,-17.118,0.191)
O3': (10.430,-19.586,2.446)
OP1: (10.531,-19.154,-2.695)
OP2: (7.971,-18.895,-2.765)
C4: (4.502,-16.786,1.072)
O5': (9.314,-18.098,-0.818)
C3': (9.535,-18.560,2.041)
C1': (8.420,-16.562,2.510)
O4': (9.290,-16.333,1.415)
C5': (10.504,-17.690,-0.163)
P: (9.310,-18.363,-2.382)
O2: (6.201,-16.196,4.031)
C4': (10.230,-17.438,1.293)
C2': (8.956,-17.798,3.219)
O2': (9.978,-17.375,4.101)
N1: (7.049,-16.712,1.987)
N3: (4.709,-16.482,2.353)
N4: (3.247,-16.760,0.624)
C6: (6.824,-17.069,0.687)
C5: (5.578,-17.118,0.191)
O3': (10.430,-19.586,2.446)
Image (generated by PyMOL):