ClaRNA

Doublet info:

Details

Nucleotide types: UA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1VQL:0614:01040

Extra

PDB:
ATOM 1 O3' U A 613 50.625 103.120 90.292 1.00 34.83 O
ATOM 2 P U A 614 50.223 101.594 89.984 1.00 35.65 P
ATOM 3 OP1 U A 614 51.431 100.747 90.134 1.00 33.12 O
ATOM 4 OP2 U A 614 49.472 101.550 88.713 1.00 34.58 O
ATOM 5 O5' U A 614 49.209 101.238 91.158 1.00 36.06 O
ATOM 6 C5' U A 614 48.379 100.057 91.081 1.00 35.20 C
ATOM 7 C4' U A 614 47.759 99.771 92.425 1.00 34.11 C
ATOM 8 O4' U A 614 48.797 99.426 93.379 1.00 33.73 O
ATOM 9 C3' U A 614 47.036 100.941 93.067 1.00 32.96 C
ATOM 10 O3' U A 614 45.704 101.016 92.584 1.00 33.10 O
ATOM 11 C2' U A 614 47.058 100.574 94.544 1.00 33.70 C
ATOM 12 O2' U A 614 46.031 99.662 94.883 1.00 33.65 O
ATOM 13 C1' U A 614 48.412 99.867 94.669 1.00 32.87 C
ATOM 14 N1 U A 614 49.488 100.693 95.239 1.00 34.50 N
ATOM 15 C2 U A 614 49.490 100.878 96.614 1.00 32.96 C
ATOM 16 O2 U A 614 48.656 100.388 97.344 1.00 35.48 O
ATOM 17 N3 U A 614 50.509 101.661 97.095 1.00 32.78 N
ATOM 18 C4 U A 614 51.513 102.258 96.360 1.00 35.17 C
ATOM 19 O4 U A 614 52.366 102.926 96.937 1.00 35.20 O
ATOM 20 C5 U A 614 51.447 102.021 94.949 1.00 33.60 C
ATOM 21 C6 U A 614 50.463 101.266 94.449 1.00 33.41 C
ATOM 22 P G A 615 45.109 102.419 92.092 1.00 33.03 P
ATOM 23 OP1 G A 615 43.753 102.166 91.535 1.00 34.20 O
ATOM 24 OP2 G A 615 46.133 103.064 91.248 1.00 31.90 O
ATOM 25 O5' G A 615 44.934 103.270 93.427 1.00 32.21 O
TER

ATOM 1 O3' C B1039 37.478 105.276 103.526 1.00 58.04 O
ATOM 2 P A B1040 37.976 106.098 102.252 1.00 57.43 P
ATOM 3 OP1 A B1040 39.244 106.762 102.639 1.00 58.08 O
ATOM 4 OP2 A B1040 36.842 106.900 101.725 1.00 55.38 O
ATOM 5 O5' A B1040 38.348 104.942 101.226 1.00 50.22 O
ATOM 6 C5' A B1040 38.735 103.655 101.709 1.00 42.59 C
ATOM 7 C4' A B1040 38.685 102.655 100.596 1.00 40.67 C
ATOM 8 O4' A B1040 39.713 102.972 99.630 1.00 36.99 O
ATOM 9 C3' A B1040 38.980 101.230 101.006 1.00 39.34 C
ATOM 10 O3' A B1040 37.776 100.640 101.492 1.00 42.71 O
ATOM 11 C2' A B1040 39.433 100.610 99.689 1.00 39.65 C
ATOM 12 O2' A B1040 38.348 100.284 98.852 1.00 43.05 O
ATOM 13 C1' A B1040 40.181 101.779 99.037 1.00 37.36 C
ATOM 14 N9 A B1040 41.637 101.744 99.152 1.00 34.93 N
ATOM 15 C8 A B1040 42.426 102.320 100.112 1.00 34.45 C
ATOM 16 N7 A B1040 43.707 102.118 99.932 1.00 36.07 N
ATOM 17 C5 A B1040 43.765 101.350 98.778 1.00 34.06 C
ATOM 18 C6 A B1040 44.837 100.779 98.070 1.00 34.19 C
ATOM 19 N6 A B1040 46.117 100.894 98.435 1.00 29.78 N
ATOM 20 N1 A B1040 44.545 100.063 96.962 1.00 34.11 N
ATOM 21 C2 A B1040 43.269 99.928 96.607 1.00 31.35 C
ATOM 22 N3 A B1040 42.181 100.409 97.192 1.00 32.15 N
ATOM 23 C4 A B1040 42.498 101.116 98.286 1.00 33.38 C
ATOM 24 P A B1041 37.626 100.259 103.057 1.00 38.83 P
ATOM 25 OP1 A B1041 36.211 100.530 103.403 1.00 41.45 O
ATOM 26 OP2 A B1041 38.696 100.891 103.856 1.00 41.08 O
ATOM 27 O5' A B1041 37.866 98.689 103.059 1.00 39.72 O
TER

Atoms:
C4: (51.513,102.258,96.360)
N3: (50.509,101.661,97.095)
OP1: (51.431,100.747,90.134)
OP2: (49.472,101.550,88.713)
C2: (49.490,100.878,96.614)
C1': (48.412,99.867,94.669)
C3': (47.036,100.941,93.067)
O5': (49.209,101.238,91.158)
O4': (48.797,99.426,93.379)
C5': (48.379,100.057,91.081)
P: (50.223,101.594,89.984)
C4': (47.759,99.771,92.425)
C2': (47.058,100.574,94.544)
O2': (46.031,99.662,94.883)
N1: (49.488,100.693,95.239)
O4: (52.366,102.926,96.937)
O2: (48.656,100.388,97.344)
C6: (50.463,101.266,94.449)
C5: (51.447,102.021,94.949)
O3': (45.704,101.016,92.584)
OP1: (39.244,106.762,102.639)
OP2: (36.842,106.900,101.725)
C3': (38.980,101.230,101.006)
C1': (40.181,101.779,99.037)
C5': (38.735,103.655,101.709)
O4': (39.713,102.972,99.630)
C8: (42.426,102.320,100.112)
O2': (38.348,100.284,98.852)
C6: (44.837,100.779,98.070)
C5: (43.765,101.350,98.778)
C4: (42.498,101.116,98.286)
P: (37.976,106.098,102.252)
C4': (38.685,102.655,100.596)
C2': (39.433,100.610,99.689)
C2: (43.269,99.928,96.607)
N1: (44.545,100.063,96.962)
N3: (42.181,100.409,97.192)
N6: (46.117,100.894,98.435)
N7: (43.707,102.118,99.932)
N9: (41.637,101.744,99.152)
O5': (38.348,104.942,101.226)
O3': (37.776,100.640,101.492)
Image (generated by PyMOL):
PyMOL image
show in jmol