ClaRNA

Doublet info:

Details

Nucleotide types: UA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1VQM:0614:01040

Extra

PDB:
ATOM 1 O3' U A 613 50.628 102.996 90.246 1.00 38.44 O
ATOM 2 P U A 614 50.225 101.465 89.955 1.00 37.61 P
ATOM 3 OP1 U A 614 51.428 100.621 90.138 1.00 35.11 O
ATOM 4 OP2 U A 614 49.482 101.397 88.678 1.00 33.52 O
ATOM 5 O5' U A 614 49.202 101.126 91.122 1.00 37.17 O
ATOM 6 C5' U A 614 48.399 99.933 91.066 1.00 36.57 C
ATOM 7 C4' U A 614 47.769 99.679 92.407 1.00 37.65 C
ATOM 8 O4' U A 614 48.802 99.356 93.374 1.00 37.62 O
ATOM 9 C3' U A 614 47.049 100.870 93.014 1.00 36.81 C
ATOM 10 O3' U A 614 45.726 100.949 92.510 1.00 37.18 O
ATOM 11 C2' U A 614 47.052 100.528 94.496 1.00 37.51 C
ATOM 12 O2' U A 614 46.027 99.612 94.830 1.00 37.78 O
ATOM 13 C1' U A 614 48.409 99.829 94.647 1.00 37.36 C
ATOM 14 N1 U A 614 49.482 100.671 95.198 1.00 39.26 N
ATOM 15 C2 U A 614 49.474 100.886 96.562 1.00 37.65 C
ATOM 16 O2 U A 614 48.631 100.414 97.291 1.00 39.28 O
ATOM 17 N3 U A 614 50.492 101.673 97.035 1.00 38.50 N
ATOM 18 C4 U A 614 51.504 102.251 96.299 1.00 40.19 C
ATOM 19 O4 U A 614 52.356 102.920 96.873 1.00 39.83 O
ATOM 20 C5 U A 614 51.445 101.992 94.891 1.00 38.90 C
ATOM 21 C6 U A 614 50.463 101.229 94.399 1.00 39.08 C
ATOM 22 P G A 615 45.122 102.363 92.053 1.00 38.41 P
ATOM 23 OP1 G A 615 43.752 102.109 91.521 1.00 38.98 O
ATOM 24 OP2 G A 615 46.119 103.044 91.205 1.00 35.41 O
ATOM 25 O5' G A 615 44.955 103.191 93.398 1.00 36.89 O
TER

ATOM 1 O3' C B1039 37.384 105.228 103.454 1.00 60.93 O
ATOM 2 P A B1040 38.127 106.008 102.271 1.00 61.23 P
ATOM 3 OP1 A B1040 39.427 106.492 102.808 1.00 60.21 O
ATOM 4 OP2 A B1040 37.165 106.962 101.665 1.00 59.42 O
ATOM 5 O5' A B1040 38.452 104.845 101.239 1.00 54.49 O
ATOM 6 C5' A B1040 38.762 103.533 101.715 1.00 47.29 C
ATOM 7 C4' A B1040 38.684 102.549 100.587 1.00 45.08 C
ATOM 8 O4' A B1040 39.699 102.872 99.611 1.00 40.92 O
ATOM 9 C3' A B1040 38.977 101.119 100.982 1.00 44.67 C
ATOM 10 O3' A B1040 37.775 100.534 101.477 1.00 48.58 O
ATOM 11 C2' A B1040 39.435 100.505 99.664 1.00 43.92 C
ATOM 12 O2' A B1040 38.360 100.167 98.819 1.00 48.55 O
ATOM 13 C1' A B1040 40.176 101.681 99.019 1.00 42.24 C
ATOM 14 N9 A B1040 41.632 101.656 99.144 1.00 38.31 N
ATOM 15 C8 A B1040 42.406 102.255 100.101 1.00 36.70 C
ATOM 16 N7 A B1040 43.689 102.075 99.928 1.00 37.18 N
ATOM 17 C5 A B1040 43.766 101.295 98.785 1.00 35.37 C
ATOM 18 C6 A B1040 44.852 100.744 98.086 1.00 34.19 C
ATOM 19 N6 A B1040 46.124 100.910 98.443 1.00 29.79 N
ATOM 20 N1 A B1040 44.581 99.999 96.992 1.00 34.66 N
ATOM 21 C2 A B1040 43.308 99.828 96.637 1.00 33.11 C
ATOM 22 N3 A B1040 42.206 100.295 97.212 1.00 33.46 N
ATOM 23 C4 A B1040 42.507 101.026 98.294 1.00 35.77 C
ATOM 24 P A B1041 37.624 100.187 103.048 1.00 44.27 P
ATOM 25 OP1 A B1041 36.226 100.524 103.411 1.00 46.84 O
ATOM 26 OP2 A B1041 38.734 100.786 103.819 1.00 46.52 O
ATOM 27 O5' A B1041 37.805 98.611 103.078 1.00 44.59 O
TER

Atoms:
C4: (51.504,102.251,96.299)
N3: (50.492,101.673,97.035)
OP1: (51.428,100.621,90.138)
OP2: (49.482,101.397,88.678)
C2: (49.474,100.886,96.562)
C1': (48.409,99.829,94.647)
C3': (47.049,100.870,93.014)
O5': (49.202,101.126,91.122)
O4': (48.802,99.356,93.374)
C5': (48.399,99.933,91.066)
P: (50.225,101.465,89.955)
C4': (47.769,99.679,92.407)
C2': (47.052,100.528,94.496)
O2': (46.027,99.612,94.830)
N1: (49.482,100.671,95.198)
O4: (52.356,102.920,96.873)
O2: (48.631,100.414,97.291)
C6: (50.463,101.229,94.399)
C5: (51.445,101.992,94.891)
O3': (45.726,100.949,92.510)
OP1: (39.427,106.492,102.808)
OP2: (37.165,106.962,101.665)
C3': (38.977,101.119,100.982)
C1': (40.176,101.681,99.019)
C5': (38.762,103.533,101.715)
O4': (39.699,102.872,99.611)
C8: (42.406,102.255,100.101)
O2': (38.360,100.167,98.819)
C6: (44.852,100.744,98.086)
C5: (43.766,101.295,98.785)
C4: (42.507,101.026,98.294)
P: (38.127,106.008,102.271)
C4': (38.684,102.549,100.587)
C2': (39.435,100.505,99.664)
C2: (43.308,99.828,96.637)
N1: (44.581,99.999,96.992)
N3: (42.206,100.295,97.212)
N6: (46.124,100.910,98.443)
N7: (43.689,102.075,99.928)
N9: (41.632,101.656,99.144)
O5': (38.452,104.845,101.239)
O3': (37.775,100.534,101.477)
Image (generated by PyMOL):
PyMOL image
show in jmol