ClaRNA

Doublet info:

Details

Nucleotide types: UA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1VQN:0614:01040

Extra

PDB:
ATOM 1 O3' U A 613 50.718 103.183 90.344 1.00 37.23 O
ATOM 2 P U A 614 50.302 101.652 90.058 1.00 35.13 P
ATOM 3 OP1 U A 614 51.516 100.816 90.206 1.00 34.92 O
ATOM 4 OP2 U A 614 49.517 101.568 88.808 1.00 36.56 O
ATOM 5 O5' U A 614 49.304 101.303 91.245 1.00 37.25 O
ATOM 6 C5' U A 614 48.479 100.119 91.188 1.00 34.94 C
ATOM 7 C4' U A 614 47.827 99.884 92.524 1.00 35.34 C
ATOM 8 O4' U A 614 48.842 99.541 93.505 1.00 35.27 O
ATOM 9 C3' U A 614 47.112 101.089 93.117 1.00 34.59 C
ATOM 10 O3' U A 614 45.792 101.168 92.592 1.00 34.02 O
ATOM 11 C2' U A 614 47.106 100.756 94.606 1.00 36.23 C
ATOM 12 O2' U A 614 46.084 99.844 94.947 1.00 38.26 O
ATOM 13 C1' U A 614 48.450 100.032 94.773 1.00 36.52 C
ATOM 14 N1 U A 614 49.532 100.864 95.323 1.00 39.21 N
ATOM 15 C2 U A 614 49.550 101.064 96.694 1.00 36.72 C
ATOM 16 O2 U A 614 48.726 100.589 97.434 1.00 36.60 O
ATOM 17 N3 U A 614 50.583 101.839 97.157 1.00 38.20 N
ATOM 18 C4 U A 614 51.588 102.410 96.407 1.00 38.53 C
ATOM 19 O4 U A 614 52.462 103.055 96.972 1.00 39.73 O
ATOM 20 C5 U A 614 51.498 102.176 95.000 1.00 38.16 C
ATOM 21 C6 U A 614 50.497 101.433 94.515 1.00 39.25 C
ATOM 22 P G A 615 45.174 102.585 92.143 1.00 35.84 P
ATOM 23 OP1 G A 615 43.798 102.330 91.639 1.00 37.89 O
ATOM 24 OP2 G A 615 46.151 103.255 91.267 1.00 36.03 O
ATOM 25 O5' G A 615 45.023 103.418 93.494 1.00 35.02 O
TER

ATOM 1 O3' C B1039 38.566 106.187 103.701 1.00 58.85 O
ATOM 2 P A B1040 37.791 106.185 102.300 1.00 60.91 P
ATOM 3 OP1 A B1040 38.024 107.524 101.705 1.00 61.06 O
ATOM 4 OP2 A B1040 36.394 105.697 102.485 1.00 60.82 O
ATOM 5 O5' A B1040 38.590 105.099 101.452 1.00 55.08 O
ATOM 6 C5' A B1040 38.755 103.764 101.945 1.00 46.42 C
ATOM 7 C4' A B1040 38.750 102.792 100.800 1.00 44.13 C
ATOM 8 O4' A B1040 39.808 103.135 99.877 1.00 42.03 O
ATOM 9 C3' A B1040 39.041 101.352 101.166 1.00 43.61 C
ATOM 10 O3' A B1040 37.843 100.730 101.620 1.00 45.89 O
ATOM 11 C2' A B1040 39.514 100.775 99.836 1.00 43.10 C
ATOM 12 O2' A B1040 38.452 100.471 98.960 1.00 46.62 O
ATOM 13 C1' A B1040 40.266 101.964 99.234 1.00 40.58 C
ATOM 14 N9 A B1040 41.724 101.912 99.327 1.00 37.86 N
ATOM 15 C8 A B1040 42.538 102.466 100.277 1.00 37.67 C
ATOM 16 N7 A B1040 43.814 102.267 100.058 1.00 39.32 N
ATOM 17 C5 A B1040 43.839 101.522 98.890 1.00 37.93 C
ATOM 18 C6 A B1040 44.894 100.974 98.135 1.00 38.98 C
ATOM 19 N6 A B1040 46.186 101.105 98.451 1.00 35.68 N
ATOM 20 N1 A B1040 44.569 100.268 97.027 1.00 39.29 N
ATOM 21 C2 A B1040 43.284 100.129 96.715 1.00 36.33 C
ATOM 22 N3 A B1040 42.211 100.596 97.344 1.00 36.48 N
ATOM 23 C4 A B1040 42.561 101.290 98.435 1.00 36.57 C
ATOM 24 P A B1041 37.666 100.356 103.177 1.00 43.90 P
ATOM 25 OP1 A B1041 36.252 100.660 103.511 1.00 45.60 O
ATOM 26 OP2 A B1041 38.751 100.974 103.979 1.00 43.93 O
ATOM 27 O5' A B1041 37.871 98.782 103.195 1.00 43.33 O
TER

Atoms:
C4: (51.588,102.410,96.407)
N3: (50.583,101.839,97.157)
OP1: (51.516,100.816,90.206)
OP2: (49.517,101.568,88.808)
C2: (49.550,101.064,96.694)
C1': (48.450,100.032,94.773)
C3': (47.112,101.089,93.117)
O5': (49.304,101.303,91.245)
O4': (48.842,99.541,93.505)
C5': (48.479,100.119,91.188)
P: (50.302,101.652,90.058)
C4': (47.827,99.884,92.524)
C2': (47.106,100.756,94.606)
O2': (46.084,99.844,94.947)
N1: (49.532,100.864,95.323)
O4: (52.462,103.055,96.972)
O2: (48.726,100.589,97.434)
C6: (50.497,101.433,94.515)
C5: (51.498,102.176,95.000)
O3': (45.792,101.168,92.592)
OP1: (38.024,107.524,101.705)
OP2: (36.394,105.697,102.485)
C3': (39.041,101.352,101.166)
C1': (40.266,101.964,99.234)
C5': (38.755,103.764,101.945)
O4': (39.808,103.135,99.877)
C8: (42.538,102.466,100.277)
O2': (38.452,100.471,98.960)
C6: (44.894,100.974,98.135)
C5: (43.839,101.522,98.890)
C4: (42.561,101.290,98.435)
P: (37.791,106.185,102.300)
C4': (38.750,102.792,100.800)
C2': (39.514,100.775,99.836)
C2: (43.284,100.129,96.715)
N1: (44.569,100.268,97.027)
N3: (42.211,100.596,97.344)
N6: (46.186,101.105,98.451)
N7: (43.814,102.267,100.058)
N9: (41.724,101.912,99.327)
O5': (38.590,105.099,101.452)
O3': (37.843,100.730,101.620)
Image (generated by PyMOL):
PyMOL image
show in jmol