ClaRNA

Doublet info:

Details

Nucleotide types: UA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YI2:0614:01040

Extra

PDB:
ATOM 1 O3' U A 613 50.779 104.031 90.479 1.00 32.99 O
ATOM 2 P U A 614 50.340 102.522 90.150 1.00 32.86 P
ATOM 3 OP1 U A 614 51.514 101.642 90.366 1.00 30.57 O
ATOM 4 OP2 U A 614 49.644 102.500 88.841 1.00 30.85 O
ATOM 5 O5' U A 614 49.261 102.203 91.270 1.00 32.03 O
ATOM 6 C5' U A 614 48.481 101.001 91.212 1.00 31.79 C
ATOM 7 C4' U A 614 47.878 100.721 92.558 1.00 30.62 C
ATOM 8 O4' U A 614 48.928 100.406 93.503 1.00 30.23 O
ATOM 9 C3' U A 614 47.150 101.898 93.183 1.00 30.58 C
ATOM 10 O3' U A 614 45.820 101.963 92.685 1.00 29.83 O
ATOM 11 C2' U A 614 47.181 101.542 94.662 1.00 30.61 C
ATOM 12 O2' U A 614 46.194 100.583 94.970 1.00 29.07 O
ATOM 13 C1' U A 614 48.558 100.876 94.787 1.00 30.69 C
ATOM 14 N1 U A 614 49.646 101.718 95.316 1.00 32.44 N
ATOM 15 C2 U A 614 49.737 101.869 96.696 1.00 33.04 C
ATOM 16 O2 U A 614 48.940 101.389 97.467 1.00 35.19 O
ATOM 17 N3 U A 614 50.806 102.608 97.132 1.00 32.69 N
ATOM 18 C4 U A 614 51.774 103.208 96.352 1.00 34.06 C
ATOM 19 O4 U A 614 52.700 103.804 96.899 1.00 34.00 O
ATOM 20 C5 U A 614 51.600 103.038 94.935 1.00 31.80 C
ATOM 21 C6 U A 614 50.568 102.321 94.478 1.00 33.13 C
ATOM 22 P G A 615 45.210 103.365 92.197 1.00 32.75 P
ATOM 23 OP1 G A 615 43.900 103.038 91.583 1.00 29.99 O
ATOM 24 OP2 G A 615 46.226 104.076 91.394 1.00 31.56 O
ATOM 25 O5' G A 615 44.981 104.189 93.544 1.00 29.01 O
TER

ATOM 1 O3' C B1039 37.449 106.337 103.170 1.00 54.91 O
ATOM 2 P A B1040 38.106 107.050 101.890 1.00 56.54 P
ATOM 3 OP1 A B1040 39.364 107.734 102.298 1.00 56.83 O
ATOM 4 OP2 A B1040 37.052 107.813 101.168 1.00 55.98 O
ATOM 5 O5' A B1040 38.530 105.801 100.995 1.00 50.64 O
ATOM 6 C5' A B1040 38.748 104.512 101.593 1.00 39.19 C
ATOM 7 C4' A B1040 38.714 103.445 100.539 1.00 36.90 C
ATOM 8 O4' A B1040 39.740 103.716 99.561 1.00 34.69 O
ATOM 9 C3' A B1040 39.010 102.040 101.024 1.00 37.85 C
ATOM 10 O3' A B1040 37.810 101.440 101.500 1.00 40.11 O
ATOM 11 C2' A B1040 39.498 101.358 99.752 1.00 37.25 C
ATOM 12 O2' A B1040 38.441 100.980 98.898 1.00 39.40 O
ATOM 13 C1' A B1040 40.258 102.497 99.068 1.00 35.31 C
ATOM 14 N9 A B1040 41.713 102.494 99.248 1.00 33.61 N
ATOM 15 C8 A B1040 42.459 103.079 100.242 1.00 31.01 C
ATOM 16 N7 A B1040 43.749 102.925 100.091 1.00 31.88 N
ATOM 17 C5 A B1040 43.864 102.178 98.924 1.00 32.38 C
ATOM 18 C6 A B1040 44.979 101.666 98.216 1.00 32.81 C
ATOM 19 N6 A B1040 46.249 101.826 98.599 1.00 29.46 N
ATOM 20 N1 A B1040 44.736 100.963 97.088 1.00 33.02 N
ATOM 21 C2 A B1040 43.472 100.777 96.711 1.00 30.39 C
ATOM 22 N3 A B1040 42.354 101.195 97.288 1.00 31.75 N
ATOM 23 C4 A B1040 42.619 101.899 98.401 1.00 31.67 C
ATOM 24 P A B1041 37.633 101.106 103.063 1.00 39.55 P
ATOM 25 OP1 A B1041 36.205 101.384 103.362 1.00 40.11 O
ATOM 26 OP2 A B1041 38.695 101.761 103.870 1.00 41.24 O
ATOM 27 O5' A B1041 37.859 99.535 103.136 1.00 38.90 O
TER

Atoms:
C4: (51.774,103.208,96.352)
N3: (50.806,102.608,97.132)
OP1: (51.514,101.642,90.366)
OP2: (49.644,102.500,88.841)
C2: (49.737,101.869,96.696)
C1': (48.558,100.876,94.787)
C3': (47.150,101.898,93.183)
O5': (49.261,102.203,91.270)
O4': (48.928,100.406,93.503)
C5': (48.481,101.001,91.212)
P: (50.340,102.522,90.150)
C4': (47.878,100.721,92.558)
C2': (47.181,101.542,94.662)
O2': (46.194,100.583,94.970)
N1: (49.646,101.718,95.316)
O4: (52.700,103.804,96.899)
O2: (48.940,101.389,97.467)
C6: (50.568,102.321,94.478)
C5: (51.600,103.038,94.935)
O3': (45.820,101.963,92.685)
OP1: (39.364,107.734,102.298)
OP2: (37.052,107.813,101.168)
C3': (39.010,102.040,101.024)
C1': (40.258,102.497,99.068)
C5': (38.748,104.512,101.593)
O4': (39.740,103.716,99.561)
C8: (42.459,103.079,100.242)
O2': (38.441,100.980,98.898)
C6: (44.979,101.666,98.216)
C5: (43.864,102.178,98.924)
C4: (42.619,101.899,98.401)
P: (38.106,107.050,101.890)
C4': (38.714,103.445,100.539)
C2': (39.498,101.358,99.752)
C2: (43.472,100.777,96.711)
N1: (44.736,100.963,97.088)
N3: (42.354,101.195,97.288)
N6: (46.249,101.826,98.599)
N7: (43.749,102.925,100.091)
N9: (41.713,102.494,99.248)
O5': (38.530,105.801,100.995)
O3': (37.810,101.440,101.500)
Image (generated by PyMOL):
PyMOL image
show in jmol