ClaRNA

Doublet info:

Details

Nucleotide types: UA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YJ9:0614:01040

Extra

PDB:
ATOM 1 O3' U A 613 50.987 104.349 90.763 1.00 34.46 O
ATOM 2 P U A 614 50.518 102.842 90.460 1.00 34.19 P
ATOM 3 OP1 U A 614 51.668 101.944 90.709 1.00 34.01 O
ATOM 4 OP2 U A 614 49.847 102.808 89.145 1.00 34.00 O
ATOM 5 O5' U A 614 49.414 102.555 91.568 1.00 33.20 O
ATOM 6 C5' U A 614 48.621 101.368 91.518 1.00 33.64 C
ATOM 7 C4' U A 614 48.083 101.048 92.884 1.00 35.03 C
ATOM 8 O4' U A 614 49.167 100.709 93.786 1.00 35.88 O
ATOM 9 C3' U A 614 47.358 102.184 93.577 1.00 35.58 C
ATOM 10 O3' U A 614 46.010 102.246 93.131 1.00 32.65 O
ATOM 11 C2' U A 614 47.436 101.764 95.038 1.00 37.81 C
ATOM 12 O2' U A 614 46.441 100.800 95.321 1.00 38.26 O
ATOM 13 C1' U A 614 48.831 101.119 95.104 1.00 38.17 C
ATOM 14 N1 U A 614 49.905 101.997 95.608 1.00 40.55 N
ATOM 15 C2 U A 614 49.985 102.231 96.979 1.00 41.20 C
ATOM 16 O2 U A 614 49.213 101.761 97.774 1.00 45.26 O
ATOM 17 N3 U A 614 51.011 103.046 97.375 1.00 41.24 N
ATOM 18 C4 U A 614 51.949 103.650 96.564 1.00 44.56 C
ATOM 19 O4 U A 614 52.801 104.380 97.066 1.00 47.06 O
ATOM 20 C5 U A 614 51.806 103.372 95.168 1.00 44.25 C
ATOM 21 C6 U A 614 50.816 102.575 94.748 1.00 43.34 C
ATOM 22 P G A 615 45.419 103.622 92.559 1.00 33.82 P
ATOM 23 OP1 G A 615 44.126 103.289 91.942 1.00 35.46 O
ATOM 24 OP2 G A 615 46.447 104.295 91.753 1.00 33.17 O
ATOM 25 O5' G A 615 45.132 104.492 93.860 1.00 32.05 O
TER

ATOM 1 O3' C B1039 37.573 106.584 103.510 1.00 57.95 O
ATOM 2 P A B1040 38.106 107.305 102.180 1.00 59.59 P
ATOM 3 OP1 A B1040 39.324 108.096 102.517 1.00 60.13 O
ATOM 4 OP2 A B1040 36.966 107.961 101.482 1.00 58.87 O
ATOM 5 O5' A B1040 38.593 106.079 101.294 1.00 55.49 O
ATOM 6 C5' A B1040 38.868 104.805 101.887 1.00 48.92 C
ATOM 7 C4' A B1040 38.835 103.745 100.830 1.00 47.35 C
ATOM 8 O4' A B1040 39.843 104.030 99.832 1.00 46.90 O
ATOM 9 C3' A B1040 39.145 102.340 101.294 1.00 46.68 C
ATOM 10 O3' A B1040 37.960 101.760 101.825 1.00 44.71 O
ATOM 11 C2' A B1040 39.586 101.675 99.993 1.00 47.93 C
ATOM 12 O2' A B1040 38.497 101.331 99.154 1.00 49.31 O
ATOM 13 C1' A B1040 40.353 102.816 99.314 1.00 45.81 C
ATOM 14 N9 A B1040 41.804 102.808 99.516 1.00 43.03 N
ATOM 15 C8 A B1040 42.513 103.422 100.514 1.00 41.14 C
ATOM 16 N7 A B1040 43.809 103.267 100.411 1.00 42.05 N
ATOM 17 C5 A B1040 43.966 102.487 99.274 1.00 41.45 C
ATOM 18 C6 A B1040 45.112 101.963 98.621 1.00 40.93 C
ATOM 19 N6 A B1040 46.362 102.137 99.049 1.00 38.67 N
ATOM 20 N1 A B1040 44.917 101.233 97.502 1.00 41.34 N
ATOM 21 C2 A B1040 43.664 101.031 97.083 1.00 41.40 C
ATOM 22 N3 A B1040 42.516 101.458 97.612 1.00 42.30 N
ATOM 23 C4 A B1040 42.739 102.191 98.717 1.00 42.04 C
ATOM 24 P A B1041 37.845 101.453 103.394 1.00 43.40 P
ATOM 25 OP1 A B1041 36.441 101.735 103.771 1.00 42.75 O
ATOM 26 OP2 A B1041 38.949 102.105 104.145 1.00 43.80 O
ATOM 27 O5' A B1041 38.066 99.883 103.458 1.00 43.10 O
TER

Atoms:
C4: (51.949,103.650,96.564)
N3: (51.011,103.046,97.375)
OP1: (51.668,101.944,90.709)
OP2: (49.847,102.808,89.145)
C2: (49.985,102.231,96.979)
C1': (48.831,101.119,95.104)
C3': (47.358,102.184,93.577)
O5': (49.414,102.555,91.568)
O4': (49.167,100.709,93.786)
C5': (48.621,101.368,91.518)
P: (50.518,102.842,90.460)
C4': (48.083,101.048,92.884)
C2': (47.436,101.764,95.038)
O2': (46.441,100.800,95.321)
N1: (49.905,101.997,95.608)
O4: (52.801,104.380,97.066)
O2: (49.213,101.761,97.774)
C6: (50.816,102.575,94.748)
C5: (51.806,103.372,95.168)
O3': (46.010,102.246,93.131)
OP1: (39.324,108.096,102.517)
OP2: (36.966,107.961,101.482)
C3': (39.145,102.340,101.294)
C1': (40.353,102.816,99.314)
C5': (38.868,104.805,101.887)
O4': (39.843,104.030,99.832)
C8: (42.513,103.422,100.514)
O2': (38.497,101.331,99.154)
C6: (45.112,101.963,98.621)
C5: (43.966,102.487,99.274)
C4: (42.739,102.191,98.717)
P: (38.106,107.305,102.180)
C4': (38.835,103.745,100.830)
C2': (39.586,101.675,99.993)
C2: (43.664,101.031,97.083)
N1: (44.917,101.233,97.502)
N3: (42.516,101.458,97.612)
N6: (46.362,102.137,99.049)
N7: (43.809,103.267,100.411)
N9: (41.804,102.808,99.516)
O5': (38.593,106.079,101.294)
O3': (37.960,101.760,101.825)
Image (generated by PyMOL):
PyMOL image
show in jmol