ClaRNA

Doublet info:

Details

Nucleotide types: UA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YJN:0614:01040

Extra

PDB:
ATOM 1 O3' U A 613 50.761 104.141 90.450 1.00 32.60 O
ATOM 2 P U A 614 50.304 102.645 90.085 1.00 31.95 P
ATOM 3 OP1 U A 614 51.481 101.756 90.154 1.00 30.74 O
ATOM 4 OP2 U A 614 49.527 102.727 88.832 1.00 31.02 O
ATOM 5 O5' U A 614 49.321 102.249 91.273 1.00 32.90 O
ATOM 6 C5' U A 614 48.535 101.045 91.219 1.00 32.25 C
ATOM 7 C4' U A 614 47.902 100.777 92.563 1.00 32.72 C
ATOM 8 O4' U A 614 48.936 100.462 93.524 1.00 33.70 O
ATOM 9 C3' U A 614 47.149 101.937 93.190 1.00 32.79 C
ATOM 10 O3' U A 614 45.817 102.010 92.694 1.00 31.94 O
ATOM 11 C2' U A 614 47.181 101.584 94.670 1.00 33.67 C
ATOM 12 O2' U A 614 46.223 100.608 95.004 1.00 35.01 O
ATOM 13 C1' U A 614 48.564 100.947 94.802 1.00 34.44 C
ATOM 14 N1 U A 614 49.627 101.839 95.293 1.00 35.84 N
ATOM 15 C2 U A 614 49.739 102.032 96.660 1.00 35.45 C
ATOM 16 O2 U A 614 48.970 101.552 97.465 1.00 36.78 O
ATOM 17 N3 U A 614 50.788 102.815 97.048 1.00 35.88 N
ATOM 18 C4 U A 614 51.715 103.420 96.233 1.00 37.82 C
ATOM 19 O4 U A 614 52.629 104.066 96.738 1.00 39.37 O
ATOM 20 C5 U A 614 51.517 103.204 94.836 1.00 36.70 C
ATOM 21 C6 U A 614 50.504 102.445 94.423 1.00 36.29 C
ATOM 22 P G A 615 45.234 103.415 92.186 1.00 32.76 P
ATOM 23 OP1 G A 615 43.932 103.174 91.533 1.00 33.39 O
ATOM 24 OP2 G A 615 46.299 104.099 91.434 1.00 34.92 O
ATOM 25 O5' G A 615 44.985 104.239 93.520 1.00 30.94 O
TER

ATOM 1 O3' C B1039 37.469 106.397 103.149 1.00 51.37 O
ATOM 2 P A B1040 38.072 107.137 101.857 1.00 52.30 P
ATOM 3 OP1 A B1040 39.296 107.891 102.245 1.00 54.17 O
ATOM 4 OP2 A B1040 36.968 107.834 101.149 1.00 52.63 O
ATOM 5 O5' A B1040 38.555 105.922 100.950 1.00 48.10 O
ATOM 6 C5' A B1040 38.790 104.635 101.530 1.00 42.56 C
ATOM 7 C4' A B1040 38.738 103.579 100.470 1.00 40.91 C
ATOM 8 O4' A B1040 39.775 103.840 99.501 1.00 40.22 O
ATOM 9 C3' A B1040 39.023 102.173 100.960 1.00 40.73 C
ATOM 10 O3' A B1040 37.828 101.592 101.453 1.00 41.87 O
ATOM 11 C2' A B1040 39.509 101.480 99.697 1.00 40.13 C
ATOM 12 O2' A B1040 38.444 101.086 98.858 1.00 38.94 O
ATOM 13 C1' A B1040 40.283 102.611 99.014 1.00 39.81 C
ATOM 14 N9 A B1040 41.733 102.603 99.217 1.00 38.38 N
ATOM 15 C8 A B1040 42.454 103.194 100.221 1.00 36.81 C
ATOM 16 N7 A B1040 43.747 103.043 100.097 1.00 37.02 N
ATOM 17 C5 A B1040 43.888 102.295 98.938 1.00 37.19 C
ATOM 18 C6 A B1040 45.016 101.805 98.251 1.00 37.56 C
ATOM 19 N6 A B1040 46.275 102.004 98.646 1.00 38.94 N
ATOM 20 N1 A B1040 44.805 101.094 97.126 1.00 37.28 N
ATOM 21 C2 A B1040 43.554 100.894 96.724 1.00 35.92 C
ATOM 22 N3 A B1040 42.420 101.301 97.276 1.00 37.58 N
ATOM 23 C4 A B1040 42.658 102.006 98.393 1.00 37.43 C
ATOM 24 P A B1041 37.657 101.312 103.026 1.00 43.29 P
ATOM 25 OP1 A B1041 36.220 101.557 103.339 1.00 42.10 O
ATOM 26 OP2 A B1041 38.704 102.034 103.794 1.00 42.07 O
ATOM 27 O5' A B1041 37.929 99.749 103.140 1.00 41.16 O
TER

Atoms:
C4: (51.715,103.420,96.233)
N3: (50.788,102.815,97.048)
OP1: (51.481,101.756,90.154)
OP2: (49.527,102.727,88.832)
C2: (49.739,102.032,96.660)
C1': (48.564,100.947,94.802)
C3': (47.149,101.937,93.190)
O5': (49.321,102.249,91.273)
O4': (48.936,100.462,93.524)
C5': (48.535,101.045,91.219)
P: (50.304,102.645,90.085)
C4': (47.902,100.777,92.563)
C2': (47.181,101.584,94.670)
O2': (46.223,100.608,95.004)
N1: (49.627,101.839,95.293)
O4: (52.629,104.066,96.738)
O2: (48.970,101.552,97.465)
C6: (50.504,102.445,94.423)
C5: (51.517,103.204,94.836)
O3': (45.817,102.010,92.694)
OP1: (39.296,107.891,102.245)
OP2: (36.968,107.834,101.149)
C3': (39.023,102.173,100.960)
C1': (40.283,102.611,99.014)
C5': (38.790,104.635,101.530)
O4': (39.775,103.840,99.501)
C8: (42.454,103.194,100.221)
O2': (38.444,101.086,98.858)
C6: (45.016,101.805,98.251)
C5: (43.888,102.295,98.938)
C4: (42.658,102.006,98.393)
P: (38.072,107.137,101.857)
C4': (38.738,103.579,100.470)
C2': (39.509,101.480,99.697)
C2: (43.554,100.894,96.724)
N1: (44.805,101.094,97.126)
N3: (42.420,101.301,97.276)
N6: (46.275,102.004,98.646)
N7: (43.747,103.043,100.097)
N9: (41.733,102.603,99.217)
O5': (38.555,105.922,100.950)
O3': (37.828,101.592,101.453)
Image (generated by PyMOL):
PyMOL image
show in jmol