Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3F1H:A2041:A2805
Extra
PDB:
ATOM 1 O3' G A2040 -64.655 -86.926 -8.046 1.00 39.71 O
ATOM 2 P U A2041 -64.508 -85.339 -7.843 1.00 38.25 P
ATOM 3 OP1 U A2041 -63.470 -85.070 -6.818 1.00 36.86 O
ATOM 4 OP2 U A2041 -65.869 -84.769 -7.651 1.00 43.36 O
ATOM 5 O5' U A2041 -63.979 -84.900 -9.288 1.00 43.83 O
ATOM 6 C5' U A2041 -62.697 -85.327 -9.706 1.00 49.24 C
ATOM 7 C4' U A2041 -62.264 -84.616 -10.981 1.00 48.54 C
ATOM 8 O4' U A2041 -62.927 -85.206 -12.126 1.00 51.35 O
ATOM 9 C3' U A2041 -62.619 -83.139 -11.076 1.00 44.94 C
ATOM 10 O3' U A2041 -61.596 -82.325 -10.525 1.00 48.11 O
ATOM 11 C2' U A2041 -62.663 -82.924 -12.574 1.00 41.85 C
ATOM 12 O2' U A2041 -61.353 -82.965 -13.093 1.00 47.33 O
ATOM 13 C1' U A2041 -63.372 -84.184 -13.000 1.00 45.97 C
ATOM 14 N1 U A2041 -64.846 -84.137 -12.980 1.00 53.40 N
ATOM 15 C2 U A2041 -65.454 -83.631 -14.094 1.00 54.70 C
ATOM 16 O2 U A2041 -64.817 -83.212 -15.032 1.00 52.69 O
ATOM 17 N3 U A2041 -66.822 -83.629 -14.071 1.00 54.01 N
ATOM 18 C4 U A2041 -67.625 -84.088 -13.046 1.00 49.86 C
ATOM 19 O4 U A2041 -68.845 -84.018 -13.171 1.00 47.11 O
ATOM 20 C5 U A2041 -66.906 -84.613 -11.902 1.00 49.04 C
ATOM 21 C6 U A2041 -65.567 -84.624 -11.910 1.00 53.36 C
ATOM 22 P G A2042 -62.095 -80.907 -9.988 1.00 40.17 P
ATOM 23 OP1 G A2042 -61.002 -80.311 -9.191 1.00 46.40 O
ATOM 24 OP2 G A2042 -63.409 -81.138 -9.319 1.00 28.26 O
ATOM 25 O5' G A2042 -62.319 -80.058 -11.340 1.00 33.27 O
TER
ATOM 1 O3' G B2804 -60.221 -79.695 -23.561 1.00 61.85 O
ATOM 2 P A B2805 -60.353 -78.357 -22.691 1.00 55.17 P
ATOM 3 OP1 A B2805 -61.692 -78.450 -22.060 1.00 59.85 O
ATOM 4 OP2 A B2805 -59.965 -77.190 -23.514 1.00 53.46 O
ATOM 5 O5' A B2805 -59.253 -78.528 -21.545 1.00 63.76 O
ATOM 6 C5' A B2805 -57.955 -77.965 -21.663 1.00 57.38 C
ATOM 7 C4' A B2805 -57.256 -77.986 -20.307 1.00 60.08 C
ATOM 8 O4' A B2805 -58.170 -77.515 -19.277 1.00 52.65 O
ATOM 9 C3' A B2805 -56.739 -79.338 -19.806 1.00 57.26 C
ATOM 10 O3' A B2805 -55.402 -79.498 -20.227 1.00 55.15 O
ATOM 11 C2' A B2805 -56.810 -79.194 -18.287 1.00 44.28 C
ATOM 12 O2' A B2805 -55.671 -78.546 -17.746 1.00 41.42 O
ATOM 13 C1' A B2805 -58.053 -78.321 -18.116 1.00 43.89 C
ATOM 14 N9 A B2805 -59.303 -79.068 -18.037 1.00 46.11 N
ATOM 15 C8 A B2805 -60.341 -79.026 -18.926 1.00 52.42 C
ATOM 16 N7 A B2805 -61.346 -79.802 -18.608 1.00 60.70 N
ATOM 17 C5 A B2805 -60.932 -80.387 -17.424 1.00 54.88 C
ATOM 18 C6 A B2805 -61.536 -81.319 -16.568 1.00 52.91 C
ATOM 19 N6 A B2805 -62.743 -81.844 -16.781 1.00 59.07 N
ATOM 20 N1 A B2805 -60.856 -81.695 -15.475 1.00 47.81 N
ATOM 21 C2 A B2805 -59.650 -81.171 -15.259 1.00 46.10 C
ATOM 22 N3 A B2805 -58.975 -80.294 -15.989 1.00 46.97 N
ATOM 23 C4 A B2805 -59.680 -79.946 -17.063 1.00 46.94 C
ATOM 24 P C B2806 -54.869 -80.927 -20.693 1.00 49.71 P
ATOM 25 OP1 C B2806 -53.393 -80.842 -20.670 1.00 63.87 O
ATOM 26 OP2 C B2806 -55.535 -81.361 -21.941 1.00 48.78 O
ATOM 27 O5' C B2806 -55.358 -81.866 -19.494 1.00 52.39 O
TER
ATOM 2 P U A2041 -64.508 -85.339 -7.843 1.00 38.25 P
ATOM 3 OP1 U A2041 -63.470 -85.070 -6.818 1.00 36.86 O
ATOM 4 OP2 U A2041 -65.869 -84.769 -7.651 1.00 43.36 O
ATOM 5 O5' U A2041 -63.979 -84.900 -9.288 1.00 43.83 O
ATOM 6 C5' U A2041 -62.697 -85.327 -9.706 1.00 49.24 C
ATOM 7 C4' U A2041 -62.264 -84.616 -10.981 1.00 48.54 C
ATOM 8 O4' U A2041 -62.927 -85.206 -12.126 1.00 51.35 O
ATOM 9 C3' U A2041 -62.619 -83.139 -11.076 1.00 44.94 C
ATOM 10 O3' U A2041 -61.596 -82.325 -10.525 1.00 48.11 O
ATOM 11 C2' U A2041 -62.663 -82.924 -12.574 1.00 41.85 C
ATOM 12 O2' U A2041 -61.353 -82.965 -13.093 1.00 47.33 O
ATOM 13 C1' U A2041 -63.372 -84.184 -13.000 1.00 45.97 C
ATOM 14 N1 U A2041 -64.846 -84.137 -12.980 1.00 53.40 N
ATOM 15 C2 U A2041 -65.454 -83.631 -14.094 1.00 54.70 C
ATOM 16 O2 U A2041 -64.817 -83.212 -15.032 1.00 52.69 O
ATOM 17 N3 U A2041 -66.822 -83.629 -14.071 1.00 54.01 N
ATOM 18 C4 U A2041 -67.625 -84.088 -13.046 1.00 49.86 C
ATOM 19 O4 U A2041 -68.845 -84.018 -13.171 1.00 47.11 O
ATOM 20 C5 U A2041 -66.906 -84.613 -11.902 1.00 49.04 C
ATOM 21 C6 U A2041 -65.567 -84.624 -11.910 1.00 53.36 C
ATOM 22 P G A2042 -62.095 -80.907 -9.988 1.00 40.17 P
ATOM 23 OP1 G A2042 -61.002 -80.311 -9.191 1.00 46.40 O
ATOM 24 OP2 G A2042 -63.409 -81.138 -9.319 1.00 28.26 O
ATOM 25 O5' G A2042 -62.319 -80.058 -11.340 1.00 33.27 O
TER
ATOM 1 O3' G B2804 -60.221 -79.695 -23.561 1.00 61.85 O
ATOM 2 P A B2805 -60.353 -78.357 -22.691 1.00 55.17 P
ATOM 3 OP1 A B2805 -61.692 -78.450 -22.060 1.00 59.85 O
ATOM 4 OP2 A B2805 -59.965 -77.190 -23.514 1.00 53.46 O
ATOM 5 O5' A B2805 -59.253 -78.528 -21.545 1.00 63.76 O
ATOM 6 C5' A B2805 -57.955 -77.965 -21.663 1.00 57.38 C
ATOM 7 C4' A B2805 -57.256 -77.986 -20.307 1.00 60.08 C
ATOM 8 O4' A B2805 -58.170 -77.515 -19.277 1.00 52.65 O
ATOM 9 C3' A B2805 -56.739 -79.338 -19.806 1.00 57.26 C
ATOM 10 O3' A B2805 -55.402 -79.498 -20.227 1.00 55.15 O
ATOM 11 C2' A B2805 -56.810 -79.194 -18.287 1.00 44.28 C
ATOM 12 O2' A B2805 -55.671 -78.546 -17.746 1.00 41.42 O
ATOM 13 C1' A B2805 -58.053 -78.321 -18.116 1.00 43.89 C
ATOM 14 N9 A B2805 -59.303 -79.068 -18.037 1.00 46.11 N
ATOM 15 C8 A B2805 -60.341 -79.026 -18.926 1.00 52.42 C
ATOM 16 N7 A B2805 -61.346 -79.802 -18.608 1.00 60.70 N
ATOM 17 C5 A B2805 -60.932 -80.387 -17.424 1.00 54.88 C
ATOM 18 C6 A B2805 -61.536 -81.319 -16.568 1.00 52.91 C
ATOM 19 N6 A B2805 -62.743 -81.844 -16.781 1.00 59.07 N
ATOM 20 N1 A B2805 -60.856 -81.695 -15.475 1.00 47.81 N
ATOM 21 C2 A B2805 -59.650 -81.171 -15.259 1.00 46.10 C
ATOM 22 N3 A B2805 -58.975 -80.294 -15.989 1.00 46.97 N
ATOM 23 C4 A B2805 -59.680 -79.946 -17.063 1.00 46.94 C
ATOM 24 P C B2806 -54.869 -80.927 -20.693 1.00 49.71 P
ATOM 25 OP1 C B2806 -53.393 -80.842 -20.670 1.00 63.87 O
ATOM 26 OP2 C B2806 -55.535 -81.361 -21.941 1.00 48.78 O
ATOM 27 O5' C B2806 -55.358 -81.866 -19.494 1.00 52.39 O
TER
Atoms:
C4: (-67.625,-84.088,-13.046)
N3: (-66.822,-83.629,-14.071)
OP1: (-63.470,-85.070,-6.818)
OP2: (-65.869,-84.769,-7.651)
C2: (-65.454,-83.631,-14.094)
C1': (-63.372,-84.184,-13.000)
C3': (-62.619,-83.139,-11.076)
O5': (-63.979,-84.900,-9.288)
O4': (-62.927,-85.206,-12.126)
C5': (-62.697,-85.327,-9.706)
P: (-64.508,-85.339,-7.843)
C4': (-62.264,-84.616,-10.981)
C2': (-62.663,-82.924,-12.574)
O2': (-61.353,-82.965,-13.093)
N1: (-64.846,-84.137,-12.980)
O4: (-68.845,-84.018,-13.171)
O2: (-64.817,-83.212,-15.032)
C6: (-65.567,-84.624,-11.910)
C5: (-66.906,-84.613,-11.902)
O3': (-61.596,-82.325,-10.525)
N3: (-66.822,-83.629,-14.071)
OP1: (-63.470,-85.070,-6.818)
OP2: (-65.869,-84.769,-7.651)
C2: (-65.454,-83.631,-14.094)
C1': (-63.372,-84.184,-13.000)
C3': (-62.619,-83.139,-11.076)
O5': (-63.979,-84.900,-9.288)
O4': (-62.927,-85.206,-12.126)
C5': (-62.697,-85.327,-9.706)
P: (-64.508,-85.339,-7.843)
C4': (-62.264,-84.616,-10.981)
C2': (-62.663,-82.924,-12.574)
O2': (-61.353,-82.965,-13.093)
N1: (-64.846,-84.137,-12.980)
O4: (-68.845,-84.018,-13.171)
O2: (-64.817,-83.212,-15.032)
C6: (-65.567,-84.624,-11.910)
C5: (-66.906,-84.613,-11.902)
O3': (-61.596,-82.325,-10.525)
OP1: (-61.692,-78.450,-22.060)
OP2: (-59.965,-77.190,-23.514)
C3': (-56.739,-79.338,-19.806)
C1': (-58.053,-78.321,-18.116)
C5': (-57.955,-77.965,-21.663)
O4': (-58.170,-77.515,-19.277)
C8: (-60.341,-79.026,-18.926)
O2': (-55.671,-78.546,-17.746)
C6: (-61.536,-81.319,-16.568)
C5: (-60.932,-80.387,-17.424)
C4: (-59.680,-79.946,-17.063)
P: (-60.353,-78.357,-22.691)
C4': (-57.256,-77.986,-20.307)
C2': (-56.810,-79.194,-18.287)
C2: (-59.650,-81.171,-15.259)
N1: (-60.856,-81.695,-15.475)
N3: (-58.975,-80.294,-15.989)
N6: (-62.743,-81.844,-16.781)
N7: (-61.346,-79.802,-18.608)
N9: (-59.303,-79.068,-18.037)
O5': (-59.253,-78.528,-21.545)
O3': (-55.402,-79.498,-20.227)
OP2: (-59.965,-77.190,-23.514)
C3': (-56.739,-79.338,-19.806)
C1': (-58.053,-78.321,-18.116)
C5': (-57.955,-77.965,-21.663)
O4': (-58.170,-77.515,-19.277)
C8: (-60.341,-79.026,-18.926)
O2': (-55.671,-78.546,-17.746)
C6: (-61.536,-81.319,-16.568)
C5: (-60.932,-80.387,-17.424)
C4: (-59.680,-79.946,-17.063)
P: (-60.353,-78.357,-22.691)
C4': (-57.256,-77.986,-20.307)
C2': (-56.810,-79.194,-18.287)
C2: (-59.650,-81.171,-15.259)
N1: (-60.856,-81.695,-15.475)
N3: (-58.975,-80.294,-15.989)
N6: (-62.743,-81.844,-16.781)
N7: (-61.346,-79.802,-18.608)
N9: (-59.303,-79.068,-18.037)
O5': (-59.253,-78.528,-21.545)
O3': (-55.402,-79.498,-20.227)
Image (generated by PyMOL):