Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3KNI:A1962:A2726
Extra
PDB:
ATOM 1 O3' G A1961 62.287 -86.402 6.667 1.00 51.02 O
ATOM 2 P U A1962 62.410 -84.825 6.376 1.00 41.75 P
ATOM 3 OP1 U A1962 61.680 -84.568 5.108 1.00 35.35 O
ATOM 4 OP2 U A1962 63.830 -84.397 6.508 1.00 39.81 O
ATOM 5 O5' U A1962 61.622 -84.170 7.588 1.00 40.06 O
ATOM 6 C5' U A1962 60.303 -84.592 7.893 1.00 46.08 C
ATOM 7 C4' U A1962 59.899 -84.080 9.243 1.00 43.97 C
ATOM 8 O4' U A1962 60.652 -84.765 10.277 1.00 45.71 O
ATOM 9 C3' U A1962 60.205 -82.615 9.454 1.00 38.89 C
ATOM 10 O3' U A1962 59.246 -81.762 8.848 1.00 34.42 O
ATOM 11 C2' U A1962 60.306 -82.522 10.967 1.00 45.37 C
ATOM 12 O2' U A1962 59.052 -82.422 11.613 1.00 45.82 O
ATOM 13 C1' U A1962 60.982 -83.852 11.305 1.00 47.73 C
ATOM 14 N1 U A1962 62.451 -83.722 11.368 1.00 52.79 N
ATOM 15 C2 U A1962 63.006 -83.172 12.528 1.00 56.32 C
ATOM 16 O2 U A1962 62.329 -82.766 13.463 1.00 52.59 O
ATOM 17 N3 U A1962 64.379 -83.106 12.549 1.00 54.84 N
ATOM 18 C4 U A1962 65.239 -83.496 11.563 1.00 51.61 C
ATOM 19 O4 U A1962 66.447 -83.397 11.757 1.00 54.06 O
ATOM 20 C5 U A1962 64.607 -84.027 10.385 1.00 52.22 C
ATOM 21 C6 U A1962 63.270 -84.123 10.329 1.00 52.67 C
ATOM 22 P G A1963 59.700 -80.307 8.327 1.00 49.43 P
ATOM 23 OP1 G A1963 58.959 -79.903 7.100 1.00 43.38 O
ATOM 24 OP2 G A1963 61.171 -80.253 8.329 1.00 47.59 O
ATOM 25 O5' G A1963 59.294 -79.359 9.535 1.00 46.50 O
TER
ATOM 1 O3' G B2725 57.487 -79.145 22.386 1.00 39.23 O
ATOM 2 P A B2726 57.236 -78.025 21.262 1.00 43.82 P
ATOM 3 OP1 A B2726 58.307 -78.229 20.242 1.00 40.32 O
ATOM 4 OP2 A B2726 57.098 -76.718 21.945 1.00 31.94 O
ATOM 5 O5' A B2726 55.834 -78.367 20.590 1.00 40.83 O
ATOM 6 C5' A B2726 54.914 -77.324 20.235 1.00 38.24 C
ATOM 7 C4' A B2726 54.347 -77.562 18.851 1.00 44.48 C
ATOM 8 O4' A B2726 55.343 -77.237 17.836 1.00 44.19 O
ATOM 9 C3' A B2726 53.969 -79.003 18.560 1.00 41.54 C
ATOM 10 O3' A B2726 52.697 -79.370 19.053 1.00 39.24 O
ATOM 11 C2' A B2726 54.074 -79.098 17.040 1.00 42.10 C
ATOM 12 O2' A B2726 52.925 -78.635 16.373 1.00 44.67 O
ATOM 13 C1' A B2726 55.227 -78.143 16.738 1.00 44.26 C
ATOM 14 N9 A B2726 56.508 -78.833 16.543 1.00 46.42 N
ATOM 15 C8 A B2726 57.647 -78.740 17.309 1.00 43.45 C
ATOM 16 N7 A B2726 58.654 -79.442 16.848 1.00 41.58 N
ATOM 17 C5 A B2726 58.141 -80.048 15.711 1.00 43.01 C
ATOM 18 C6 A B2726 58.718 -80.901 14.759 1.00 48.70 C
ATOM 19 N6 A B2726 59.983 -81.312 14.809 1.00 51.69 N
ATOM 20 N1 A B2726 57.947 -81.319 13.736 1.00 47.81 N
ATOM 21 C2 A B2726 56.679 -80.906 13.687 1.00 48.59 C
ATOM 22 N3 A B2726 56.019 -80.100 14.522 1.00 44.58 N
ATOM 23 C4 A B2726 56.818 -79.697 15.521 1.00 41.00 C
ATOM 24 P C B2727 52.417 -80.915 19.387 1.00 59.31 P
ATOM 25 OP1 C B2727 50.945 -81.142 19.539 1.00 57.87 O
ATOM 26 OP2 C B2727 53.333 -81.280 20.503 1.00 45.89 O
ATOM 27 O5' C B2727 52.891 -81.661 18.057 1.00 44.83 O
TER
ATOM 2 P U A1962 62.410 -84.825 6.376 1.00 41.75 P
ATOM 3 OP1 U A1962 61.680 -84.568 5.108 1.00 35.35 O
ATOM 4 OP2 U A1962 63.830 -84.397 6.508 1.00 39.81 O
ATOM 5 O5' U A1962 61.622 -84.170 7.588 1.00 40.06 O
ATOM 6 C5' U A1962 60.303 -84.592 7.893 1.00 46.08 C
ATOM 7 C4' U A1962 59.899 -84.080 9.243 1.00 43.97 C
ATOM 8 O4' U A1962 60.652 -84.765 10.277 1.00 45.71 O
ATOM 9 C3' U A1962 60.205 -82.615 9.454 1.00 38.89 C
ATOM 10 O3' U A1962 59.246 -81.762 8.848 1.00 34.42 O
ATOM 11 C2' U A1962 60.306 -82.522 10.967 1.00 45.37 C
ATOM 12 O2' U A1962 59.052 -82.422 11.613 1.00 45.82 O
ATOM 13 C1' U A1962 60.982 -83.852 11.305 1.00 47.73 C
ATOM 14 N1 U A1962 62.451 -83.722 11.368 1.00 52.79 N
ATOM 15 C2 U A1962 63.006 -83.172 12.528 1.00 56.32 C
ATOM 16 O2 U A1962 62.329 -82.766 13.463 1.00 52.59 O
ATOM 17 N3 U A1962 64.379 -83.106 12.549 1.00 54.84 N
ATOM 18 C4 U A1962 65.239 -83.496 11.563 1.00 51.61 C
ATOM 19 O4 U A1962 66.447 -83.397 11.757 1.00 54.06 O
ATOM 20 C5 U A1962 64.607 -84.027 10.385 1.00 52.22 C
ATOM 21 C6 U A1962 63.270 -84.123 10.329 1.00 52.67 C
ATOM 22 P G A1963 59.700 -80.307 8.327 1.00 49.43 P
ATOM 23 OP1 G A1963 58.959 -79.903 7.100 1.00 43.38 O
ATOM 24 OP2 G A1963 61.171 -80.253 8.329 1.00 47.59 O
ATOM 25 O5' G A1963 59.294 -79.359 9.535 1.00 46.50 O
TER
ATOM 1 O3' G B2725 57.487 -79.145 22.386 1.00 39.23 O
ATOM 2 P A B2726 57.236 -78.025 21.262 1.00 43.82 P
ATOM 3 OP1 A B2726 58.307 -78.229 20.242 1.00 40.32 O
ATOM 4 OP2 A B2726 57.098 -76.718 21.945 1.00 31.94 O
ATOM 5 O5' A B2726 55.834 -78.367 20.590 1.00 40.83 O
ATOM 6 C5' A B2726 54.914 -77.324 20.235 1.00 38.24 C
ATOM 7 C4' A B2726 54.347 -77.562 18.851 1.00 44.48 C
ATOM 8 O4' A B2726 55.343 -77.237 17.836 1.00 44.19 O
ATOM 9 C3' A B2726 53.969 -79.003 18.560 1.00 41.54 C
ATOM 10 O3' A B2726 52.697 -79.370 19.053 1.00 39.24 O
ATOM 11 C2' A B2726 54.074 -79.098 17.040 1.00 42.10 C
ATOM 12 O2' A B2726 52.925 -78.635 16.373 1.00 44.67 O
ATOM 13 C1' A B2726 55.227 -78.143 16.738 1.00 44.26 C
ATOM 14 N9 A B2726 56.508 -78.833 16.543 1.00 46.42 N
ATOM 15 C8 A B2726 57.647 -78.740 17.309 1.00 43.45 C
ATOM 16 N7 A B2726 58.654 -79.442 16.848 1.00 41.58 N
ATOM 17 C5 A B2726 58.141 -80.048 15.711 1.00 43.01 C
ATOM 18 C6 A B2726 58.718 -80.901 14.759 1.00 48.70 C
ATOM 19 N6 A B2726 59.983 -81.312 14.809 1.00 51.69 N
ATOM 20 N1 A B2726 57.947 -81.319 13.736 1.00 47.81 N
ATOM 21 C2 A B2726 56.679 -80.906 13.687 1.00 48.59 C
ATOM 22 N3 A B2726 56.019 -80.100 14.522 1.00 44.58 N
ATOM 23 C4 A B2726 56.818 -79.697 15.521 1.00 41.00 C
ATOM 24 P C B2727 52.417 -80.915 19.387 1.00 59.31 P
ATOM 25 OP1 C B2727 50.945 -81.142 19.539 1.00 57.87 O
ATOM 26 OP2 C B2727 53.333 -81.280 20.503 1.00 45.89 O
ATOM 27 O5' C B2727 52.891 -81.661 18.057 1.00 44.83 O
TER
Atoms:
C4: (65.239,-83.496,11.563)
N3: (64.379,-83.106,12.549)
OP1: (61.680,-84.568,5.108)
OP2: (63.830,-84.397,6.508)
C2: (63.006,-83.172,12.528)
C1': (60.982,-83.852,11.305)
C3': (60.205,-82.615,9.454)
O5': (61.622,-84.170,7.588)
O4': (60.652,-84.765,10.277)
C5': (60.303,-84.592,7.893)
P: (62.410,-84.825,6.376)
C4': (59.899,-84.080,9.243)
C2': (60.306,-82.522,10.967)
O2': (59.052,-82.422,11.613)
N1: (62.451,-83.722,11.368)
O4: (66.447,-83.397,11.757)
O2: (62.329,-82.766,13.463)
C6: (63.270,-84.123,10.329)
C5: (64.607,-84.027,10.385)
O3': (59.246,-81.762,8.848)
N3: (64.379,-83.106,12.549)
OP1: (61.680,-84.568,5.108)
OP2: (63.830,-84.397,6.508)
C2: (63.006,-83.172,12.528)
C1': (60.982,-83.852,11.305)
C3': (60.205,-82.615,9.454)
O5': (61.622,-84.170,7.588)
O4': (60.652,-84.765,10.277)
C5': (60.303,-84.592,7.893)
P: (62.410,-84.825,6.376)
C4': (59.899,-84.080,9.243)
C2': (60.306,-82.522,10.967)
O2': (59.052,-82.422,11.613)
N1: (62.451,-83.722,11.368)
O4: (66.447,-83.397,11.757)
O2: (62.329,-82.766,13.463)
C6: (63.270,-84.123,10.329)
C5: (64.607,-84.027,10.385)
O3': (59.246,-81.762,8.848)
OP1: (58.307,-78.229,20.242)
OP2: (57.098,-76.718,21.945)
C3': (53.969,-79.003,18.560)
C1': (55.227,-78.143,16.738)
C5': (54.914,-77.324,20.235)
O4': (55.343,-77.237,17.836)
C8: (57.647,-78.740,17.309)
O2': (52.925,-78.635,16.373)
C6: (58.718,-80.901,14.759)
C5: (58.141,-80.048,15.711)
C4: (56.818,-79.697,15.521)
P: (57.236,-78.025,21.262)
C4': (54.347,-77.562,18.851)
C2': (54.074,-79.098,17.040)
C2: (56.679,-80.906,13.687)
N1: (57.947,-81.319,13.736)
N3: (56.019,-80.100,14.522)
N6: (59.983,-81.312,14.809)
N7: (58.654,-79.442,16.848)
N9: (56.508,-78.833,16.543)
O5': (55.834,-78.367,20.590)
O3': (52.697,-79.370,19.053)
OP2: (57.098,-76.718,21.945)
C3': (53.969,-79.003,18.560)
C1': (55.227,-78.143,16.738)
C5': (54.914,-77.324,20.235)
O4': (55.343,-77.237,17.836)
C8: (57.647,-78.740,17.309)
O2': (52.925,-78.635,16.373)
C6: (58.718,-80.901,14.759)
C5: (58.141,-80.048,15.711)
C4: (56.818,-79.697,15.521)
P: (57.236,-78.025,21.262)
C4': (54.347,-77.562,18.851)
C2': (54.074,-79.098,17.040)
C2: (56.679,-80.906,13.687)
N1: (57.947,-81.319,13.736)
N3: (56.019,-80.100,14.522)
N6: (59.983,-81.312,14.809)
N7: (58.654,-79.442,16.848)
N9: (56.508,-78.833,16.543)
O5': (55.834,-78.367,20.590)
O3': (52.697,-79.370,19.053)
Image (generated by PyMOL):