ClaRNA

Doublet info:

Details

Nucleotide types: UA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3PDR:X152:X88

Extra

PDB:
ATOM 1 O3' U A 151 48.957 24.128 7.270 1.00 31.74 O
ATOM 2 P U A 152 48.491 25.147 6.103 1.00 40.23 P
ATOM 3 OP1 U A 152 48.917 24.528 4.822 1.00 38.42 O
ATOM 4 OP2 U A 152 48.942 26.511 6.469 1.00 35.40 O
ATOM 5 O5' U A 152 46.896 25.094 6.213 1.00 36.38 O
ATOM 6 C5' U A 152 46.143 23.935 5.876 1.00 37.04 C
ATOM 7 C4' U A 152 44.673 24.163 6.135 1.00 31.42 C
ATOM 8 O4' U A 152 44.406 24.105 7.557 1.00 30.05 O
ATOM 9 C3' U A 152 44.140 25.524 5.718 1.00 33.26 C
ATOM 10 O3' U A 152 43.813 25.557 4.345 1.00 35.64 O
ATOM 11 C2' U A 152 42.927 25.705 6.621 1.00 34.63 C
ATOM 12 O2' U A 152 41.839 24.932 6.129 1.00 33.37 O
ATOM 13 C1' U A 152 43.408 25.037 7.907 1.00 29.60 C
ATOM 14 N1 U A 152 43.970 25.911 8.960 1.00 30.32 N
ATOM 15 C2 U A 152 43.086 26.569 9.791 1.00 27.37 C
ATOM 16 O2 U A 152 41.873 26.495 9.687 1.00 25.04 O
ATOM 17 N3 U A 152 43.672 27.338 10.761 1.00 26.71 N
ATOM 18 C4 U A 152 45.020 27.509 10.999 1.00 28.61 C
ATOM 19 O4 U A 152 45.362 28.242 11.931 1.00 27.03 O
ATOM 20 C5 U A 152 45.883 26.782 10.105 1.00 30.57 C
ATOM 21 C6 U A 152 45.340 26.024 9.137 1.00 32.16 C
ATOM 22 P G A 153 44.211 26.815 3.444 1.00 39.08 P
ATOM 23 OP1 G A 153 43.730 26.433 2.093 1.00 44.76 O
ATOM 24 OP2 G A 153 45.643 27.111 3.692 1.00 45.18 O
ATOM 25 O5' G A 153 43.335 28.006 4.011 1.00 38.72 O
TER

ATOM 1 O3' C B 87 30.857 28.867 8.852 1.00 26.00 O
ATOM 2 P A B 88 30.854 27.274 9.064 1.00 24.92 P
ATOM 3 OP1 A B 88 29.423 26.900 9.148 1.00 29.59 O
ATOM 4 OP2 A B 88 31.717 27.058 10.243 1.00 19.76 O
ATOM 5 O5' A B 88 31.552 26.647 7.793 1.00 23.37 O
ATOM 6 C5' A B 88 31.067 26.858 6.475 1.00 22.72 C
ATOM 7 C4' A B 88 32.175 26.689 5.460 1.00 23.72 C
ATOM 8 O4' A B 88 33.339 27.474 5.844 1.00 24.43 O
ATOM 9 C3' A B 88 32.738 25.289 5.280 1.00 24.19 C
ATOM 10 O3' A B 88 31.924 24.445 4.479 1.00 25.39 O
ATOM 11 C2' A B 88 34.079 25.567 4.630 1.00 24.74 C
ATOM 12 O2' A B 88 33.873 25.880 3.258 1.00 29.24 O
ATOM 13 C1' A B 88 34.503 26.836 5.365 1.00 25.39 C
ATOM 14 N9 A B 88 35.397 26.564 6.507 1.00 23.88 N
ATOM 15 C8 A B 88 35.085 26.580 7.850 1.00 24.09 C
ATOM 16 N7 A B 88 36.117 26.309 8.620 1.00 23.79 N
ATOM 17 C5 A B 88 37.170 26.115 7.728 1.00 24.89 C
ATOM 18 C6 A B 88 38.536 25.811 7.903 1.00 29.34 C
ATOM 19 N6 A B 88 39.126 25.628 9.100 1.00 22.64 N
ATOM 20 N1 A B 88 39.298 25.692 6.783 1.00 29.23 N
ATOM 21 C2 A B 88 38.740 25.864 5.578 1.00 27.48 C
ATOM 22 N3 A B 88 37.470 26.159 5.299 1.00 27.81 N
ATOM 23 C4 A B 88 36.735 26.276 6.422 1.00 24.88 C
ATOM 24 P U B 89 31.267 23.114 5.092 1.00 27.32 P
ATOM 25 OP1 U B 89 30.806 22.338 3.918 1.00 25.63 O
ATOM 26 OP2 U B 89 30.318 23.576 6.121 1.00 25.24 O
ATOM 27 O5' U B 89 32.483 22.312 5.738 1.00 24.65 O
TER

Atoms:
C4: (45.020,27.509,10.999)
N3: (43.672,27.338,10.761)
OP1: (48.917,24.528,4.822)
OP2: (48.942,26.511,6.469)
C2: (43.086,26.569,9.791)
C1': (43.408,25.037,7.907)
C3': (44.140,25.524,5.718)
O5': (46.896,25.094,6.213)
O4': (44.406,24.105,7.557)
C5': (46.143,23.935,5.876)
P: (48.491,25.147,6.103)
C4': (44.673,24.163,6.135)
C2': (42.927,25.705,6.621)
O2': (41.839,24.932,6.129)
N1: (43.970,25.911,8.960)
O4: (45.362,28.242,11.931)
O2: (41.873,26.495,9.687)
C6: (45.340,26.024,9.137)
C5: (45.883,26.782,10.105)
O3': (43.813,25.557,4.345)
OP1: (29.423,26.900,9.148)
OP2: (31.717,27.058,10.243)
C3': (32.738,25.289,5.280)
C1': (34.503,26.836,5.365)
C5': (31.067,26.858,6.475)
O4': (33.339,27.474,5.844)
C8: (35.085,26.580,7.850)
O2': (33.873,25.880,3.258)
C6: (38.536,25.811,7.903)
C5: (37.170,26.115,7.728)
C4: (36.735,26.276,6.422)
P: (30.854,27.274,9.064)
C4': (32.175,26.689,5.460)
C2': (34.079,25.567,4.630)
C2: (38.740,25.864,5.578)
N1: (39.298,25.692,6.783)
N3: (37.470,26.159,5.299)
N6: (39.126,25.628,9.100)
N7: (36.117,26.309,8.620)
N9: (35.397,26.564,6.507)
O5': (31.552,26.647,7.793)
O3': (31.924,24.445,4.479)
Image (generated by PyMOL):
PyMOL image
show in jmol