Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3RKF:A46:A50
Extra
PDB:
ATOM 1 O3' C A 45 12.043 5.343 -29.164 1.00 38.26 O
ATOM 2 P U A 46 11.436 6.280 -30.317 1.00 50.34 P
ATOM 3 OP1 U A 46 12.476 7.278 -30.663 1.00 38.97 O
ATOM 4 OP2 U A 46 10.117 6.760 -29.839 1.00 52.79 O
ATOM 5 O5' U A 46 11.235 5.266 -31.525 1.00 50.08 O
ATOM 6 C5' U A 46 12.328 4.523 -32.043 1.00 47.08 C
ATOM 7 C4' U A 46 11.861 3.455 -32.999 1.00 38.69 C
ATOM 8 O4' U A 46 11.236 2.372 -32.262 1.00 35.78 O
ATOM 9 C3' U A 46 10.798 3.880 -33.999 1.00 42.34 C
ATOM 10 O3' U A 46 11.330 4.575 -35.113 1.00 45.99 O
ATOM 11 C2' U A 46 10.136 2.558 -34.359 1.00 43.40 C
ATOM 12 O2' U A 46 10.937 1.830 -35.279 1.00 43.05 O
ATOM 13 C1' U A 46 10.168 1.833 -33.014 1.00 37.85 C
ATOM 14 N1 U A 46 8.916 2.019 -32.254 1.00 39.07 N
ATOM 15 C2 U A 46 7.934 1.064 -32.426 1.00 36.64 C
ATOM 16 O2 U A 46 8.064 0.107 -33.172 1.00 37.76 O
ATOM 17 N3 U A 46 6.793 1.276 -31.699 1.00 34.79 N
ATOM 18 C4 U A 46 6.542 2.316 -30.835 1.00 39.90 C
ATOM 19 O4 U A 46 5.458 2.358 -30.255 1.00 45.11 O
ATOM 20 C5 U A 46 7.608 3.261 -30.708 1.00 42.60 C
ATOM 21 C6 U A 46 8.736 3.086 -31.403 1.00 41.81 C
ATOM 22 P G A 47 11.073 6.153 -35.277 1.00 51.07 P
ATOM 23 OP1 G A 47 12.194 6.696 -36.082 1.00 48.89 O
ATOM 24 OP2 G A 47 10.842 6.700 -33.919 1.00 41.99 O
ATOM 25 O5' G A 47 9.723 6.209 -36.120 1.00 45.61 O
TER
ATOM 1 O3' A B 49 10.231 -2.466 -44.020 1.00 64.02 O
ATOM 2 P A B 50 10.769 -3.883 -43.487 1.00 68.27 P
ATOM 3 OP1 A B 50 11.186 -4.667 -44.675 1.00 67.46 O
ATOM 4 OP2 A B 50 9.721 -4.440 -42.597 1.00 62.29 O
ATOM 5 O5' A B 50 12.049 -3.476 -42.631 1.00 57.11 O
ATOM 6 C5' A B 50 13.155 -4.364 -42.510 1.00 55.61 C
ATOM 7 C4' A B 50 13.716 -4.375 -41.110 1.00 50.60 C
ATOM 8 O4' A B 50 12.931 -3.485 -40.265 1.00 50.47 O
ATOM 9 C3' A B 50 13.707 -5.739 -40.413 1.00 49.06 C
ATOM 10 O3' A B 50 14.856 -5.845 -39.575 1.00 53.92 O
ATOM 11 C2' A B 50 12.459 -5.651 -39.544 1.00 43.61 C
ATOM 12 O2' A B 50 12.448 -6.525 -38.437 1.00 51.51 O
ATOM 13 C1' A B 50 12.518 -4.193 -39.115 1.00 47.63 C
ATOM 14 N9 A B 50 11.243 -3.646 -38.649 1.00 46.44 N
ATOM 15 C8 A B 50 9.960 -3.957 -39.023 1.00 49.05 C
ATOM 16 N7 A B 50 9.051 -3.277 -38.364 1.00 45.58 N
ATOM 17 C5 A B 50 9.788 -2.481 -37.494 1.00 41.94 C
ATOM 18 C6 A B 50 9.428 -1.531 -36.522 1.00 41.44 C
ATOM 19 N6 A B 50 8.169 -1.196 -36.238 1.00 42.82 N
ATOM 20 N1 A B 50 10.419 -0.923 -35.833 1.00 39.27 N
ATOM 21 C2 A B 50 11.687 -1.250 -36.106 1.00 39.76 C
ATOM 22 N3 A B 50 12.150 -2.125 -36.993 1.00 41.59 N
ATOM 23 C4 A B 50 11.138 -2.710 -37.657 1.00 42.92 C
ATOM 24 P A B 51 15.726 -7.195 -39.558 1.00 52.00 P
ATOM 25 OP1 A B 51 17.016 -6.886 -40.218 1.00 52.56 O
ATOM 26 OP2 A B 51 14.877 -8.272 -40.119 1.00 51.39 O
ATOM 27 O5' A B 51 15.960 -7.446 -38.003 1.00 47.89 O
TER
ATOM 2 P U A 46 11.436 6.280 -30.317 1.00 50.34 P
ATOM 3 OP1 U A 46 12.476 7.278 -30.663 1.00 38.97 O
ATOM 4 OP2 U A 46 10.117 6.760 -29.839 1.00 52.79 O
ATOM 5 O5' U A 46 11.235 5.266 -31.525 1.00 50.08 O
ATOM 6 C5' U A 46 12.328 4.523 -32.043 1.00 47.08 C
ATOM 7 C4' U A 46 11.861 3.455 -32.999 1.00 38.69 C
ATOM 8 O4' U A 46 11.236 2.372 -32.262 1.00 35.78 O
ATOM 9 C3' U A 46 10.798 3.880 -33.999 1.00 42.34 C
ATOM 10 O3' U A 46 11.330 4.575 -35.113 1.00 45.99 O
ATOM 11 C2' U A 46 10.136 2.558 -34.359 1.00 43.40 C
ATOM 12 O2' U A 46 10.937 1.830 -35.279 1.00 43.05 O
ATOM 13 C1' U A 46 10.168 1.833 -33.014 1.00 37.85 C
ATOM 14 N1 U A 46 8.916 2.019 -32.254 1.00 39.07 N
ATOM 15 C2 U A 46 7.934 1.064 -32.426 1.00 36.64 C
ATOM 16 O2 U A 46 8.064 0.107 -33.172 1.00 37.76 O
ATOM 17 N3 U A 46 6.793 1.276 -31.699 1.00 34.79 N
ATOM 18 C4 U A 46 6.542 2.316 -30.835 1.00 39.90 C
ATOM 19 O4 U A 46 5.458 2.358 -30.255 1.00 45.11 O
ATOM 20 C5 U A 46 7.608 3.261 -30.708 1.00 42.60 C
ATOM 21 C6 U A 46 8.736 3.086 -31.403 1.00 41.81 C
ATOM 22 P G A 47 11.073 6.153 -35.277 1.00 51.07 P
ATOM 23 OP1 G A 47 12.194 6.696 -36.082 1.00 48.89 O
ATOM 24 OP2 G A 47 10.842 6.700 -33.919 1.00 41.99 O
ATOM 25 O5' G A 47 9.723 6.209 -36.120 1.00 45.61 O
TER
ATOM 1 O3' A B 49 10.231 -2.466 -44.020 1.00 64.02 O
ATOM 2 P A B 50 10.769 -3.883 -43.487 1.00 68.27 P
ATOM 3 OP1 A B 50 11.186 -4.667 -44.675 1.00 67.46 O
ATOM 4 OP2 A B 50 9.721 -4.440 -42.597 1.00 62.29 O
ATOM 5 O5' A B 50 12.049 -3.476 -42.631 1.00 57.11 O
ATOM 6 C5' A B 50 13.155 -4.364 -42.510 1.00 55.61 C
ATOM 7 C4' A B 50 13.716 -4.375 -41.110 1.00 50.60 C
ATOM 8 O4' A B 50 12.931 -3.485 -40.265 1.00 50.47 O
ATOM 9 C3' A B 50 13.707 -5.739 -40.413 1.00 49.06 C
ATOM 10 O3' A B 50 14.856 -5.845 -39.575 1.00 53.92 O
ATOM 11 C2' A B 50 12.459 -5.651 -39.544 1.00 43.61 C
ATOM 12 O2' A B 50 12.448 -6.525 -38.437 1.00 51.51 O
ATOM 13 C1' A B 50 12.518 -4.193 -39.115 1.00 47.63 C
ATOM 14 N9 A B 50 11.243 -3.646 -38.649 1.00 46.44 N
ATOM 15 C8 A B 50 9.960 -3.957 -39.023 1.00 49.05 C
ATOM 16 N7 A B 50 9.051 -3.277 -38.364 1.00 45.58 N
ATOM 17 C5 A B 50 9.788 -2.481 -37.494 1.00 41.94 C
ATOM 18 C6 A B 50 9.428 -1.531 -36.522 1.00 41.44 C
ATOM 19 N6 A B 50 8.169 -1.196 -36.238 1.00 42.82 N
ATOM 20 N1 A B 50 10.419 -0.923 -35.833 1.00 39.27 N
ATOM 21 C2 A B 50 11.687 -1.250 -36.106 1.00 39.76 C
ATOM 22 N3 A B 50 12.150 -2.125 -36.993 1.00 41.59 N
ATOM 23 C4 A B 50 11.138 -2.710 -37.657 1.00 42.92 C
ATOM 24 P A B 51 15.726 -7.195 -39.558 1.00 52.00 P
ATOM 25 OP1 A B 51 17.016 -6.886 -40.218 1.00 52.56 O
ATOM 26 OP2 A B 51 14.877 -8.272 -40.119 1.00 51.39 O
ATOM 27 O5' A B 51 15.960 -7.446 -38.003 1.00 47.89 O
TER
Atoms:
C4: (6.542,2.316,-30.835)
N3: (6.793,1.276,-31.699)
OP1: (12.476,7.278,-30.663)
OP2: (10.117,6.760,-29.839)
C2: (7.934,1.064,-32.426)
C1': (10.168,1.833,-33.014)
C3': (10.798,3.880,-33.999)
O5': (11.235,5.266,-31.525)
O4': (11.236,2.372,-32.262)
C5': (12.328,4.523,-32.043)
P: (11.436,6.280,-30.317)
C4': (11.861,3.455,-32.999)
C2': (10.136,2.558,-34.359)
O2': (10.937,1.830,-35.279)
N1: (8.916,2.019,-32.254)
O4: (5.458,2.358,-30.255)
O2: (8.064,0.107,-33.172)
C6: (8.736,3.086,-31.403)
C5: (7.608,3.261,-30.708)
O3': (11.330,4.575,-35.113)
N3: (6.793,1.276,-31.699)
OP1: (12.476,7.278,-30.663)
OP2: (10.117,6.760,-29.839)
C2: (7.934,1.064,-32.426)
C1': (10.168,1.833,-33.014)
C3': (10.798,3.880,-33.999)
O5': (11.235,5.266,-31.525)
O4': (11.236,2.372,-32.262)
C5': (12.328,4.523,-32.043)
P: (11.436,6.280,-30.317)
C4': (11.861,3.455,-32.999)
C2': (10.136,2.558,-34.359)
O2': (10.937,1.830,-35.279)
N1: (8.916,2.019,-32.254)
O4: (5.458,2.358,-30.255)
O2: (8.064,0.107,-33.172)
C6: (8.736,3.086,-31.403)
C5: (7.608,3.261,-30.708)
O3': (11.330,4.575,-35.113)
OP1: (11.186,-4.667,-44.675)
OP2: (9.721,-4.440,-42.597)
C3': (13.707,-5.739,-40.413)
C1': (12.518,-4.193,-39.115)
C5': (13.155,-4.364,-42.510)
O4': (12.931,-3.485,-40.265)
C8: (9.960,-3.957,-39.023)
O2': (12.448,-6.525,-38.437)
C6: (9.428,-1.531,-36.522)
C5: (9.788,-2.481,-37.494)
C4: (11.138,-2.710,-37.657)
P: (10.769,-3.883,-43.487)
C4': (13.716,-4.375,-41.110)
C2': (12.459,-5.651,-39.544)
C2: (11.687,-1.250,-36.106)
N1: (10.419,-0.923,-35.833)
N3: (12.150,-2.125,-36.993)
N6: (8.169,-1.196,-36.238)
N7: (9.051,-3.277,-38.364)
N9: (11.243,-3.646,-38.649)
O5': (12.049,-3.476,-42.631)
O3': (14.856,-5.845,-39.575)
OP2: (9.721,-4.440,-42.597)
C3': (13.707,-5.739,-40.413)
C1': (12.518,-4.193,-39.115)
C5': (13.155,-4.364,-42.510)
O4': (12.931,-3.485,-40.265)
C8: (9.960,-3.957,-39.023)
O2': (12.448,-6.525,-38.437)
C6: (9.428,-1.531,-36.522)
C5: (9.788,-2.481,-37.494)
C4: (11.138,-2.710,-37.657)
P: (10.769,-3.883,-43.487)
C4': (13.716,-4.375,-41.110)
C2': (12.459,-5.651,-39.544)
C2: (11.687,-1.250,-36.106)
N1: (10.419,-0.923,-35.833)
N3: (12.150,-2.125,-36.993)
N6: (8.169,-1.196,-36.238)
N7: (9.051,-3.277,-38.364)
N9: (11.243,-3.646,-38.649)
O5': (12.049,-3.476,-42.631)
O3': (14.856,-5.845,-39.575)
Image (generated by PyMOL):