Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1J1U:B22:B46
Extra
PDB:
ATOM 1 O3' A A 21 -14.028 33.173 101.050 1.00 90.47 O
ATOM 2 P G A 22 -13.408 32.556 102.399 1.00 83.62 P
ATOM 3 OP1 G A 22 -14.508 32.424 103.373 1.00 91.28 O
ATOM 4 OP2 G A 22 -12.193 33.314 102.793 1.00 93.75 O
ATOM 5 O5' G A 22 -12.977 31.104 101.925 1.00 78.84 O
ATOM 6 C5' G A 22 -11.940 30.437 102.596 1.00 77.60 C
ATOM 7 C4' G A 22 -11.635 29.136 101.924 1.00 72.19 C
ATOM 8 O4' G A 22 -11.542 29.306 100.480 1.00 65.65 O
ATOM 9 C3' G A 22 -10.268 28.627 102.318 1.00 71.15 C
ATOM 10 O3' G A 22 -10.335 27.924 103.554 1.00 89.87 O
ATOM 11 C2' G A 22 -9.978 27.704 101.164 1.00 73.93 C
ATOM 12 O2' G A 22 -10.816 26.565 101.297 1.00 73.58 O
ATOM 13 C1' G A 22 -10.433 28.571 99.988 1.00 62.41 C
ATOM 14 N9 G A 22 -9.409 29.498 99.463 1.00 48.65 N
ATOM 15 C8 G A 22 -9.227 30.840 99.758 1.00 44.76 C
ATOM 16 N7 G A 22 -8.250 31.397 99.066 1.00 45.14 N
ATOM 17 C5 G A 22 -7.765 30.367 98.265 1.00 48.02 C
ATOM 18 C6 G A 22 -6.728 30.364 97.273 1.00 39.35 C
ATOM 19 O6 G A 22 -6.071 31.304 96.870 1.00 41.28 O
ATOM 20 N1 G A 22 -6.510 29.091 96.743 1.00 46.27 N
ATOM 21 C2 G A 22 -7.229 27.955 97.120 1.00 52.44 C
ATOM 22 N2 G A 22 -6.837 26.790 96.606 1.00 51.96 N
ATOM 23 N3 G A 22 -8.244 27.962 97.976 1.00 53.90 N
ATOM 24 C4 G A 22 -8.445 29.181 98.522 1.00 51.02 C
ATOM 25 P A A 23 -8.973 27.471 104.288 1.00 90.92 P
ATOM 26 OP1 A A 23 -9.348 26.858 105.593 1.00 93.45 O
ATOM 27 OP2 A A 23 -8.059 28.652 104.267 1.00 96.00 O
ATOM 28 O5' A A 23 -8.384 26.333 103.326 1.00 88.29 O
TER
ATOM 1 O3' U B 45 -2.777 38.436 104.457 1.00 47.00 O
ATOM 2 P G B 46 -3.111 40.014 104.327 1.00 55.40 P
ATOM 3 OP1 G B 46 -1.912 40.874 104.588 1.00 57.92 O
ATOM 4 OP2 G B 46 -4.402 40.290 105.019 1.00 52.92 O
ATOM 5 O5' G B 46 -3.310 40.167 102.764 1.00 52.97 O
ATOM 6 C5' G B 46 -2.284 39.762 101.867 1.00 43.66 C
ATOM 7 C4' G B 46 -2.907 39.568 100.526 1.00 50.05 C
ATOM 8 O4' G B 46 -3.828 38.441 100.588 1.00 43.50 O
ATOM 9 C3' G B 46 -3.804 40.763 100.218 1.00 49.39 C
ATOM 10 O3' G B 46 -3.053 41.862 99.668 1.00 68.49 O
ATOM 11 C2' G B 46 -4.978 40.228 99.420 1.00 54.62 C
ATOM 12 O2' G B 46 -4.719 40.445 98.054 1.00 64.66 O
ATOM 13 C1' G B 46 -4.938 38.722 99.749 1.00 45.03 C
ATOM 14 N9 G B 46 -6.109 37.995 100.235 1.00 37.53 N
ATOM 15 C8 G B 46 -7.014 38.297 101.225 1.00 34.82 C
ATOM 16 N7 G B 46 -7.894 37.325 101.410 1.00 39.32 N
ATOM 17 C5 G B 46 -7.553 36.351 100.473 1.00 37.13 C
ATOM 18 C6 G B 46 -8.101 35.022 100.216 1.00 37.47 C
ATOM 19 O6 G B 46 -9.065 34.468 100.755 1.00 41.91 O
ATOM 20 N1 G B 46 -7.366 34.340 99.237 1.00 37.09 N
ATOM 21 C2 G B 46 -6.254 34.867 98.600 1.00 36.88 C
ATOM 22 N2 G B 46 -5.617 34.114 97.724 1.00 31.45 N
ATOM 23 N3 G B 46 -5.790 36.073 98.808 1.00 32.65 N
ATOM 24 C4 G B 46 -6.464 36.747 99.745 1.00 38.61 C
ATOM 25 P U B 47 -2.227 41.718 98.278 1.00 61.10 P
ATOM 26 OP1 U B 47 -2.062 40.361 97.723 1.00 61.67 O
ATOM 27 OP2 U B 47 -1.024 42.539 98.634 1.00 71.32 O
ATOM 28 O5' U B 47 -3.085 42.551 97.229 1.00 67.88 O
TER
ATOM 2 P G A 22 -13.408 32.556 102.399 1.00 83.62 P
ATOM 3 OP1 G A 22 -14.508 32.424 103.373 1.00 91.28 O
ATOM 4 OP2 G A 22 -12.193 33.314 102.793 1.00 93.75 O
ATOM 5 O5' G A 22 -12.977 31.104 101.925 1.00 78.84 O
ATOM 6 C5' G A 22 -11.940 30.437 102.596 1.00 77.60 C
ATOM 7 C4' G A 22 -11.635 29.136 101.924 1.00 72.19 C
ATOM 8 O4' G A 22 -11.542 29.306 100.480 1.00 65.65 O
ATOM 9 C3' G A 22 -10.268 28.627 102.318 1.00 71.15 C
ATOM 10 O3' G A 22 -10.335 27.924 103.554 1.00 89.87 O
ATOM 11 C2' G A 22 -9.978 27.704 101.164 1.00 73.93 C
ATOM 12 O2' G A 22 -10.816 26.565 101.297 1.00 73.58 O
ATOM 13 C1' G A 22 -10.433 28.571 99.988 1.00 62.41 C
ATOM 14 N9 G A 22 -9.409 29.498 99.463 1.00 48.65 N
ATOM 15 C8 G A 22 -9.227 30.840 99.758 1.00 44.76 C
ATOM 16 N7 G A 22 -8.250 31.397 99.066 1.00 45.14 N
ATOM 17 C5 G A 22 -7.765 30.367 98.265 1.00 48.02 C
ATOM 18 C6 G A 22 -6.728 30.364 97.273 1.00 39.35 C
ATOM 19 O6 G A 22 -6.071 31.304 96.870 1.00 41.28 O
ATOM 20 N1 G A 22 -6.510 29.091 96.743 1.00 46.27 N
ATOM 21 C2 G A 22 -7.229 27.955 97.120 1.00 52.44 C
ATOM 22 N2 G A 22 -6.837 26.790 96.606 1.00 51.96 N
ATOM 23 N3 G A 22 -8.244 27.962 97.976 1.00 53.90 N
ATOM 24 C4 G A 22 -8.445 29.181 98.522 1.00 51.02 C
ATOM 25 P A A 23 -8.973 27.471 104.288 1.00 90.92 P
ATOM 26 OP1 A A 23 -9.348 26.858 105.593 1.00 93.45 O
ATOM 27 OP2 A A 23 -8.059 28.652 104.267 1.00 96.00 O
ATOM 28 O5' A A 23 -8.384 26.333 103.326 1.00 88.29 O
TER
ATOM 1 O3' U B 45 -2.777 38.436 104.457 1.00 47.00 O
ATOM 2 P G B 46 -3.111 40.014 104.327 1.00 55.40 P
ATOM 3 OP1 G B 46 -1.912 40.874 104.588 1.00 57.92 O
ATOM 4 OP2 G B 46 -4.402 40.290 105.019 1.00 52.92 O
ATOM 5 O5' G B 46 -3.310 40.167 102.764 1.00 52.97 O
ATOM 6 C5' G B 46 -2.284 39.762 101.867 1.00 43.66 C
ATOM 7 C4' G B 46 -2.907 39.568 100.526 1.00 50.05 C
ATOM 8 O4' G B 46 -3.828 38.441 100.588 1.00 43.50 O
ATOM 9 C3' G B 46 -3.804 40.763 100.218 1.00 49.39 C
ATOM 10 O3' G B 46 -3.053 41.862 99.668 1.00 68.49 O
ATOM 11 C2' G B 46 -4.978 40.228 99.420 1.00 54.62 C
ATOM 12 O2' G B 46 -4.719 40.445 98.054 1.00 64.66 O
ATOM 13 C1' G B 46 -4.938 38.722 99.749 1.00 45.03 C
ATOM 14 N9 G B 46 -6.109 37.995 100.235 1.00 37.53 N
ATOM 15 C8 G B 46 -7.014 38.297 101.225 1.00 34.82 C
ATOM 16 N7 G B 46 -7.894 37.325 101.410 1.00 39.32 N
ATOM 17 C5 G B 46 -7.553 36.351 100.473 1.00 37.13 C
ATOM 18 C6 G B 46 -8.101 35.022 100.216 1.00 37.47 C
ATOM 19 O6 G B 46 -9.065 34.468 100.755 1.00 41.91 O
ATOM 20 N1 G B 46 -7.366 34.340 99.237 1.00 37.09 N
ATOM 21 C2 G B 46 -6.254 34.867 98.600 1.00 36.88 C
ATOM 22 N2 G B 46 -5.617 34.114 97.724 1.00 31.45 N
ATOM 23 N3 G B 46 -5.790 36.073 98.808 1.00 32.65 N
ATOM 24 C4 G B 46 -6.464 36.747 99.745 1.00 38.61 C
ATOM 25 P U B 47 -2.227 41.718 98.278 1.00 61.10 P
ATOM 26 OP1 U B 47 -2.062 40.361 97.723 1.00 61.67 O
ATOM 27 OP2 U B 47 -1.024 42.539 98.634 1.00 71.32 O
ATOM 28 O5' U B 47 -3.085 42.551 97.229 1.00 67.88 O
TER
Atoms:
OP1: (-14.508,32.424,103.373)
OP2: (-12.193,33.314,102.793)
C3': (-10.268,28.627,102.318)
C1': (-10.433,28.571,99.988)
C5': (-11.940,30.437,102.596)
O6: (-6.071,31.304,96.870)
O4': (-11.542,29.306,100.480)
C8: (-9.227,30.840,99.758)
C2: (-7.229,27.955,97.120)
C6: (-6.728,30.364,97.273)
C5: (-7.765,30.367,98.265)
C4: (-8.445,29.181,98.522)
P: (-13.408,32.556,102.399)
C4': (-11.635,29.136,101.924)
C2': (-9.978,27.704,101.164)
O2': (-10.816,26.565,101.297)
N1: (-6.510,29.091,96.743)
N2: (-6.837,26.790,96.606)
N3: (-8.244,27.962,97.976)
N7: (-8.250,31.397,99.066)
N9: (-9.409,29.498,99.463)
O5': (-12.977,31.104,101.925)
O3': (-10.335,27.924,103.554)
OP2: (-12.193,33.314,102.793)
C3': (-10.268,28.627,102.318)
C1': (-10.433,28.571,99.988)
C5': (-11.940,30.437,102.596)
O6: (-6.071,31.304,96.870)
O4': (-11.542,29.306,100.480)
C8: (-9.227,30.840,99.758)
C2: (-7.229,27.955,97.120)
C6: (-6.728,30.364,97.273)
C5: (-7.765,30.367,98.265)
C4: (-8.445,29.181,98.522)
P: (-13.408,32.556,102.399)
C4': (-11.635,29.136,101.924)
C2': (-9.978,27.704,101.164)
O2': (-10.816,26.565,101.297)
N1: (-6.510,29.091,96.743)
N2: (-6.837,26.790,96.606)
N3: (-8.244,27.962,97.976)
N7: (-8.250,31.397,99.066)
N9: (-9.409,29.498,99.463)
O5': (-12.977,31.104,101.925)
O3': (-10.335,27.924,103.554)
OP1: (-1.912,40.874,104.588)
OP2: (-4.402,40.290,105.019)
C3': (-3.804,40.763,100.218)
C1': (-4.938,38.722,99.749)
C5': (-2.284,39.762,101.867)
O6: (-9.065,34.468,100.755)
O4': (-3.828,38.441,100.588)
C8: (-7.014,38.297,101.225)
C2: (-6.254,34.867,98.600)
C6: (-8.101,35.022,100.216)
C5: (-7.553,36.351,100.473)
C4: (-6.464,36.747,99.745)
P: (-3.111,40.014,104.327)
C4': (-2.907,39.568,100.526)
C2': (-4.978,40.228,99.420)
O2': (-4.719,40.445,98.054)
N1: (-7.366,34.340,99.237)
N2: (-5.617,34.114,97.724)
N3: (-5.790,36.073,98.808)
N7: (-7.894,37.325,101.410)
N9: (-6.109,37.995,100.235)
O5': (-3.310,40.167,102.764)
O3': (-3.053,41.862,99.668)
OP2: (-4.402,40.290,105.019)
C3': (-3.804,40.763,100.218)
C1': (-4.938,38.722,99.749)
C5': (-2.284,39.762,101.867)
O6: (-9.065,34.468,100.755)
O4': (-3.828,38.441,100.588)
C8: (-7.014,38.297,101.225)
C2: (-6.254,34.867,98.600)
C6: (-8.101,35.022,100.216)
C5: (-7.553,36.351,100.473)
C4: (-6.464,36.747,99.745)
P: (-3.111,40.014,104.327)
C4': (-2.907,39.568,100.526)
C2': (-4.978,40.228,99.420)
O2': (-4.719,40.445,98.054)
N1: (-7.366,34.340,99.237)
N2: (-5.617,34.114,97.724)
N3: (-5.790,36.073,98.808)
N7: (-7.894,37.325,101.410)
N9: (-6.109,37.995,100.235)
O5': (-3.310,40.167,102.764)
O3': (-3.053,41.862,99.668)
Image (generated by PyMOL):