ClaRNA

Doublet info:

Details

Nucleotide types: GG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1VQK:0523:02028

Extra

PDB:
ATOM 1 O3' C A 522 25.035 130.136 109.760 1.00 49.34 O
ATOM 2 P G A 523 25.326 128.553 109.810 1.00 53.25 P
ATOM 3 OP1 G A 523 24.325 127.925 108.903 1.00 53.85 O
ATOM 4 OP2 G A 523 25.452 128.067 111.215 1.00 52.93 O
ATOM 5 O5' G A 523 26.749 128.424 109.118 1.00 50.13 O
ATOM 6 C5' G A 523 26.942 128.912 107.787 1.00 46.18 C
ATOM 7 C4' G A 523 28.177 128.305 107.190 1.00 44.13 C
ATOM 8 O4' G A 523 29.352 128.872 107.825 1.00 44.83 O
ATOM 9 C3' G A 523 28.318 126.794 107.354 1.00 42.93 C
ATOM 10 O3' G A 523 28.980 126.336 106.195 1.00 44.66 O
ATOM 11 C2' G A 523 29.319 126.677 108.493 1.00 41.57 C
ATOM 12 O2' G A 523 30.036 125.464 108.441 1.00 44.67 O
ATOM 13 C1' G A 523 30.240 127.827 108.127 1.00 40.95 C
ATOM 14 N9 G A 523 31.234 128.303 109.080 1.00 40.74 N
ATOM 15 C8 G A 523 31.143 128.411 110.449 1.00 39.74 C
ATOM 16 N7 G A 523 32.219 128.913 110.990 1.00 38.11 N
ATOM 17 C5 G A 523 33.067 129.143 109.912 1.00 37.95 C
ATOM 18 C6 G A 523 34.372 129.686 109.864 1.00 37.17 C
ATOM 19 O6 G A 523 35.067 130.094 110.789 1.00 36.29 O
ATOM 20 N1 G A 523 34.860 129.734 108.562 1.00 39.05 N
ATOM 21 C2 G A 523 34.182 129.312 107.447 1.00 37.89 C
ATOM 22 N2 G A 523 34.824 129.420 106.274 1.00 36.27 N
ATOM 23 N3 G A 523 32.967 128.816 107.480 1.00 38.29 N
ATOM 24 C4 G A 523 32.474 128.762 108.734 1.00 38.04 C
ATOM 25 P A A 524 28.268 125.285 105.241 1.00 43.03 P
ATOM 26 OP1 A A 524 27.039 125.946 104.733 1.00 44.60 O
ATOM 27 OP2 A A 524 28.164 124.006 105.970 1.00 43.90 O
ATOM 28 O5' A A 524 29.310 125.122 104.052 1.00 42.53 O
TER

ATOM 1 O3' A B2027 33.859 127.016 122.851 1.00 42.40 O
ATOM 2 P G B2028 32.687 128.115 122.812 1.00 41.40 P
ATOM 3 OP1 G B2028 32.665 128.751 124.154 1.00 44.07 O
ATOM 4 OP2 G B2028 31.449 127.505 122.260 1.00 38.97 O
ATOM 5 O5' G B2028 33.213 129.211 121.783 1.00 40.49 O
ATOM 6 C5' G B2028 34.407 129.960 122.065 1.00 39.98 C
ATOM 7 C4' G B2028 34.991 130.524 120.791 1.00 38.03 C
ATOM 8 O4' G B2028 35.175 129.454 119.823 1.00 37.43 O
ATOM 9 C3' G B2028 34.138 131.535 120.039 1.00 37.42 C
ATOM 10 O3' G B2028 34.258 132.839 120.608 1.00 37.04 O
ATOM 11 C2' G B2028 34.744 131.473 118.642 1.00 36.51 C
ATOM 12 O2' G B2028 35.983 132.151 118.539 1.00 35.86 O
ATOM 13 C1' G B2028 35.041 129.980 118.513 1.00 35.65 C
ATOM 14 N9 G B2028 34.013 129.244 117.782 1.00 35.53 N
ATOM 15 C8 G B2028 33.063 128.379 118.282 1.00 35.28 C
ATOM 16 N7 G B2028 32.301 127.865 117.356 1.00 32.77 N
ATOM 17 C5 G B2028 32.770 128.429 116.175 1.00 34.29 C
ATOM 18 C6 G B2028 32.334 128.258 114.836 1.00 32.00 C
ATOM 19 O6 G B2028 31.416 127.561 114.413 1.00 34.22 O
ATOM 20 N1 G B2028 33.088 129.012 113.951 1.00 31.82 N
ATOM 21 C2 G B2028 34.129 129.835 114.302 1.00 32.82 C
ATOM 22 N2 G B2028 34.748 130.473 113.291 1.00 27.81 N
ATOM 23 N3 G B2028 34.539 130.016 115.547 1.00 32.14 N
ATOM 24 C4 G B2028 33.822 129.285 116.424 1.00 33.99 C
ATOM 25 P A B2029 33.103 133.923 120.350 1.00 38.72 P
ATOM 26 OP1 A B2029 33.544 135.213 120.907 1.00 42.29 O
ATOM 27 OP2 A B2029 31.829 133.324 120.818 1.00 43.09 O
ATOM 28 O5' A B2029 33.031 134.049 118.764 1.00 38.44 O
TER

Atoms:
OP1: (24.325,127.925,108.903)
OP2: (25.452,128.067,111.215)
C3': (28.318,126.794,107.354)
C1': (30.240,127.827,108.127)
C5': (26.942,128.912,107.787)
O6: (35.067,130.094,110.789)
O4': (29.352,128.872,107.825)
C8: (31.143,128.411,110.449)
C2: (34.182,129.312,107.447)
C6: (34.372,129.686,109.864)
C5: (33.067,129.143,109.912)
C4: (32.474,128.762,108.734)
P: (25.326,128.553,109.810)
C4': (28.177,128.305,107.190)
C2': (29.319,126.677,108.493)
O2': (30.036,125.464,108.441)
N1: (34.860,129.734,108.562)
N2: (34.824,129.420,106.274)
N3: (32.967,128.816,107.480)
N7: (32.219,128.913,110.990)
N9: (31.234,128.303,109.080)
O5': (26.749,128.424,109.118)
O3': (28.980,126.336,106.195)
OP1: (32.665,128.751,124.154)
OP2: (31.449,127.505,122.260)
C3': (34.138,131.535,120.039)
C1': (35.041,129.980,118.513)
C5': (34.407,129.960,122.065)
O6: (31.416,127.561,114.413)
O4': (35.175,129.454,119.823)
C8: (33.063,128.379,118.282)
C2: (34.129,129.835,114.302)
C6: (32.334,128.258,114.836)
C5: (32.770,128.429,116.175)
C4: (33.822,129.285,116.424)
P: (32.687,128.115,122.812)
C4': (34.991,130.524,120.791)
C2': (34.744,131.473,118.642)
O2': (35.983,132.151,118.539)
N1: (33.088,129.012,113.951)
N2: (34.748,130.473,113.291)
N3: (34.539,130.016,115.547)
N7: (32.301,127.865,117.356)
N9: (34.013,129.244,117.782)
O5': (33.213,129.211,121.783)
O3': (34.258,132.839,120.608)
Image (generated by PyMOL):
PyMOL image
show in jmol