ClaRNA

Doublet info:

Details

Nucleotide types: GG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1VQN:0523:02028

Extra

PDB:
ATOM 1 O3' C A 522 25.064 130.194 109.640 1.00 52.85 O
ATOM 2 P G A 523 25.239 128.595 109.743 1.00 55.90 P
ATOM 3 OP1 G A 523 24.177 128.004 108.880 1.00 55.20 O
ATOM 4 OP2 G A 523 25.359 128.154 111.163 1.00 54.93 O
ATOM 5 O5' G A 523 26.643 128.334 109.040 1.00 52.47 O
ATOM 6 C5' G A 523 26.866 128.761 107.688 1.00 47.89 C
ATOM 7 C4' G A 523 28.139 128.164 107.154 1.00 45.09 C
ATOM 8 O4' G A 523 29.280 128.779 107.805 1.00 45.40 O
ATOM 9 C3' G A 523 28.318 126.664 107.371 1.00 44.94 C
ATOM 10 O3' G A 523 28.986 126.167 106.233 1.00 46.24 O
ATOM 11 C2' G A 523 29.332 126.611 108.504 1.00 43.90 C
ATOM 12 O2' G A 523 30.077 125.415 108.497 1.00 46.81 O
ATOM 13 C1' G A 523 30.215 127.773 108.089 1.00 42.82 C
ATOM 14 N9 G A 523 31.209 128.290 109.021 1.00 42.90 N
ATOM 15 C8 G A 523 31.125 128.418 110.388 1.00 42.43 C
ATOM 16 N7 G A 523 32.193 128.949 110.915 1.00 39.54 N
ATOM 17 C5 G A 523 33.028 129.181 109.831 1.00 39.38 C
ATOM 18 C6 G A 523 34.318 129.750 109.776 1.00 38.53 C
ATOM 19 O6 G A 523 35.007 130.178 110.702 1.00 36.71 O
ATOM 20 N1 G A 523 34.802 129.795 108.468 1.00 39.38 N
ATOM 21 C2 G A 523 34.127 129.344 107.358 1.00 39.40 C
ATOM 22 N2 G A 523 34.755 129.460 106.175 1.00 36.10 N
ATOM 23 N3 G A 523 32.924 128.815 107.404 1.00 39.94 N
ATOM 24 C4 G A 523 32.438 128.768 108.661 1.00 40.23 C
ATOM 25 P A A 524 28.185 125.306 105.165 1.00 47.19 P
ATOM 26 OP1 A A 524 27.042 126.147 104.707 1.00 45.66 O
ATOM 27 OP2 A A 524 27.927 123.979 105.774 1.00 47.23 O
ATOM 28 O5' A A 524 29.218 125.139 103.967 1.00 47.09 O
TER

ATOM 1 O3' A B2027 33.705 127.036 122.831 1.00 44.35 O
ATOM 2 P G B2028 32.538 128.139 122.763 1.00 43.45 P
ATOM 3 OP1 G B2028 32.481 128.772 124.101 1.00 47.52 O
ATOM 4 OP2 G B2028 31.308 127.554 122.167 1.00 42.12 O
ATOM 5 O5' G B2028 33.098 129.228 121.748 1.00 44.49 O
ATOM 6 C5' G B2028 34.332 129.910 122.011 1.00 42.37 C
ATOM 7 C4' G B2028 34.901 130.472 120.729 1.00 41.22 C
ATOM 8 O4' G B2028 35.026 129.407 119.747 1.00 40.02 O
ATOM 9 C3' G B2028 34.053 131.506 120.008 1.00 39.49 C
ATOM 10 O3' G B2028 34.208 132.799 120.587 1.00 40.15 O
ATOM 11 C2' G B2028 34.627 131.449 118.598 1.00 39.24 C
ATOM 12 O2' G B2028 35.865 132.122 118.477 1.00 39.05 O
ATOM 13 C1' G B2028 34.904 129.955 118.445 1.00 38.51 C
ATOM 14 N9 G B2028 33.880 129.228 117.696 1.00 37.80 N
ATOM 15 C8 G B2028 32.939 128.344 118.180 1.00 37.67 C
ATOM 16 N7 G B2028 32.183 127.838 117.243 1.00 35.11 N
ATOM 17 C5 G B2028 32.642 128.431 116.074 1.00 36.56 C
ATOM 18 C6 G B2028 32.201 128.284 114.726 1.00 35.22 C
ATOM 19 O6 G B2028 31.274 127.587 114.284 1.00 35.94 O
ATOM 20 N1 G B2028 32.954 129.067 113.857 1.00 33.51 N
ATOM 21 C2 G B2028 33.985 129.896 114.230 1.00 34.39 C
ATOM 22 N2 G B2028 34.601 130.571 113.244 1.00 31.33 N
ATOM 23 N3 G B2028 34.390 130.053 115.478 1.00 34.34 N
ATOM 24 C4 G B2028 33.685 129.293 116.339 1.00 35.73 C
ATOM 25 P A B2029 33.090 133.920 120.329 1.00 41.43 P
ATOM 26 OP1 A B2029 33.563 135.221 120.834 1.00 41.68 O
ATOM 27 OP2 A B2029 31.815 133.358 120.835 1.00 44.39 O
ATOM 28 O5' A B2029 33.006 134.017 118.740 1.00 40.65 O
TER

Atoms:
OP1: (24.177,128.004,108.880)
OP2: (25.359,128.154,111.163)
C3': (28.318,126.664,107.371)
C1': (30.215,127.773,108.089)
C5': (26.866,128.761,107.688)
O6: (35.007,130.178,110.702)
O4': (29.280,128.779,107.805)
C8: (31.125,128.418,110.388)
C2: (34.127,129.344,107.358)
C6: (34.318,129.750,109.776)
C5: (33.028,129.181,109.831)
C4: (32.438,128.768,108.661)
P: (25.239,128.595,109.743)
C4': (28.139,128.164,107.154)
C2': (29.332,126.611,108.504)
O2': (30.077,125.415,108.497)
N1: (34.802,129.795,108.468)
N2: (34.755,129.460,106.175)
N3: (32.924,128.815,107.404)
N7: (32.193,128.949,110.915)
N9: (31.209,128.290,109.021)
O5': (26.643,128.334,109.040)
O3': (28.986,126.167,106.233)
OP1: (32.481,128.772,124.101)
OP2: (31.308,127.554,122.167)
C3': (34.053,131.506,120.008)
C1': (34.904,129.955,118.445)
C5': (34.332,129.910,122.011)
O6: (31.274,127.587,114.284)
O4': (35.026,129.407,119.747)
C8: (32.939,128.344,118.180)
C2: (33.985,129.896,114.230)
C6: (32.201,128.284,114.726)
C5: (32.642,128.431,116.074)
C4: (33.685,129.293,116.339)
P: (32.538,128.139,122.763)
C4': (34.901,130.472,120.729)
C2': (34.627,131.449,118.598)
O2': (35.865,132.122,118.477)
N1: (32.954,129.067,113.857)
N2: (34.601,130.571,113.244)
N3: (34.390,130.053,115.478)
N7: (32.183,127.838,117.243)
N9: (33.880,129.228,117.696)
O5': (33.098,129.228,121.748)
O3': (34.208,132.799,120.587)
Image (generated by PyMOL):
PyMOL image
show in jmol