Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YHQ:0523:02028
Extra
PDB:
ATOM 1 O3' C A 522 25.209 130.392 109.616 1.00 42.36 O
ATOM 2 P G A 523 25.429 128.805 109.755 1.00 45.46 P
ATOM 3 OP1 G A 523 24.360 128.149 108.961 1.00 47.16 O
ATOM 4 OP2 G A 523 25.626 128.412 111.176 1.00 46.86 O
ATOM 5 O5' G A 523 26.807 128.573 109.002 1.00 44.10 O
ATOM 6 C5' G A 523 26.966 128.996 107.645 1.00 39.27 C
ATOM 7 C4' G A 523 28.190 128.364 107.050 1.00 38.05 C
ATOM 8 O4' G A 523 29.369 128.954 107.652 1.00 37.85 O
ATOM 9 C3' G A 523 28.332 126.856 107.258 1.00 37.17 C
ATOM 10 O3' G A 523 28.992 126.339 106.117 1.00 38.45 O
ATOM 11 C2' G A 523 29.326 126.776 108.410 1.00 36.28 C
ATOM 12 O2' G A 523 30.039 125.557 108.417 1.00 38.37 O
ATOM 13 C1' G A 523 30.246 127.921 108.022 1.00 35.87 C
ATOM 14 N9 G A 523 31.212 128.445 108.976 1.00 36.65 N
ATOM 15 C8 G A 523 31.105 128.575 110.342 1.00 35.17 C
ATOM 16 N7 G A 523 32.159 129.122 110.882 1.00 33.22 N
ATOM 17 C5 G A 523 33.009 129.355 109.809 1.00 33.49 C
ATOM 18 C6 G A 523 34.299 129.925 109.765 1.00 33.07 C
ATOM 19 O6 G A 523 34.984 130.345 110.699 1.00 34.02 O
ATOM 20 N1 G A 523 34.791 129.975 108.463 1.00 31.88 N
ATOM 21 C2 G A 523 34.130 129.522 107.350 1.00 31.21 C
ATOM 22 N2 G A 523 34.761 129.638 106.173 1.00 29.36 N
ATOM 23 N3 G A 523 32.934 128.989 107.385 1.00 33.13 N
ATOM 24 C4 G A 523 32.437 128.938 108.633 1.00 33.83 C
ATOM 25 P A A 524 28.191 125.435 105.074 1.00 40.54 P
ATOM 26 OP1 A A 524 27.000 126.220 104.631 1.00 38.80 O
ATOM 27 OP2 A A 524 28.003 124.087 105.668 1.00 37.44 O
ATOM 28 O5' A A 524 29.215 125.318 103.858 1.00 39.57 O
TER
ATOM 1 O3' A B2027 33.770 127.229 122.697 1.00 34.13 O
ATOM 2 P G B2028 32.602 128.327 122.638 1.00 34.40 P
ATOM 3 OP1 G B2028 32.524 128.953 123.980 1.00 37.41 O
ATOM 4 OP2 G B2028 31.390 127.714 122.032 1.00 31.66 O
ATOM 5 O5' G B2028 33.156 129.437 121.641 1.00 34.43 O
ATOM 6 C5' G B2028 34.378 130.140 121.930 1.00 35.26 C
ATOM 7 C4' G B2028 34.969 130.712 120.663 1.00 33.83 C
ATOM 8 O4' G B2028 35.161 129.644 119.694 1.00 35.48 O
ATOM 9 C3' G B2028 34.110 131.717 119.915 1.00 34.09 C
ATOM 10 O3' G B2028 34.219 133.021 120.484 1.00 35.02 O
ATOM 11 C2' G B2028 34.699 131.655 118.510 1.00 33.29 C
ATOM 12 O2' G B2028 35.909 132.371 118.389 1.00 32.90 O
ATOM 13 C1' G B2028 35.017 130.165 118.383 1.00 33.49 C
ATOM 14 N9 G B2028 34.002 129.404 117.656 1.00 32.47 N
ATOM 15 C8 G B2028 33.081 128.508 118.153 1.00 32.22 C
ATOM 16 N7 G B2028 32.312 127.997 117.227 1.00 30.18 N
ATOM 17 C5 G B2028 32.750 128.594 116.050 1.00 32.06 C
ATOM 18 C6 G B2028 32.291 128.456 114.709 1.00 30.16 C
ATOM 19 O6 G B2028 31.371 127.763 114.274 1.00 31.55 O
ATOM 20 N1 G B2028 33.020 129.247 113.837 1.00 29.33 N
ATOM 21 C2 G B2028 34.052 130.073 114.193 1.00 30.87 C
ATOM 22 N2 G B2028 34.643 130.748 113.198 1.00 29.58 N
ATOM 23 N3 G B2028 34.479 130.225 115.431 1.00 31.65 N
ATOM 24 C4 G B2028 33.792 129.461 116.301 1.00 31.76 C
ATOM 25 P A B2029 33.099 134.125 120.163 1.00 34.77 P
ATOM 26 OP1 A B2029 33.560 135.436 120.671 1.00 36.37 O
ATOM 27 OP2 A B2029 31.789 133.584 120.610 1.00 37.50 O
ATOM 28 O5' A B2029 33.075 134.189 118.572 1.00 36.63 O
TER
ATOM 2 P G A 523 25.429 128.805 109.755 1.00 45.46 P
ATOM 3 OP1 G A 523 24.360 128.149 108.961 1.00 47.16 O
ATOM 4 OP2 G A 523 25.626 128.412 111.176 1.00 46.86 O
ATOM 5 O5' G A 523 26.807 128.573 109.002 1.00 44.10 O
ATOM 6 C5' G A 523 26.966 128.996 107.645 1.00 39.27 C
ATOM 7 C4' G A 523 28.190 128.364 107.050 1.00 38.05 C
ATOM 8 O4' G A 523 29.369 128.954 107.652 1.00 37.85 O
ATOM 9 C3' G A 523 28.332 126.856 107.258 1.00 37.17 C
ATOM 10 O3' G A 523 28.992 126.339 106.117 1.00 38.45 O
ATOM 11 C2' G A 523 29.326 126.776 108.410 1.00 36.28 C
ATOM 12 O2' G A 523 30.039 125.557 108.417 1.00 38.37 O
ATOM 13 C1' G A 523 30.246 127.921 108.022 1.00 35.87 C
ATOM 14 N9 G A 523 31.212 128.445 108.976 1.00 36.65 N
ATOM 15 C8 G A 523 31.105 128.575 110.342 1.00 35.17 C
ATOM 16 N7 G A 523 32.159 129.122 110.882 1.00 33.22 N
ATOM 17 C5 G A 523 33.009 129.355 109.809 1.00 33.49 C
ATOM 18 C6 G A 523 34.299 129.925 109.765 1.00 33.07 C
ATOM 19 O6 G A 523 34.984 130.345 110.699 1.00 34.02 O
ATOM 20 N1 G A 523 34.791 129.975 108.463 1.00 31.88 N
ATOM 21 C2 G A 523 34.130 129.522 107.350 1.00 31.21 C
ATOM 22 N2 G A 523 34.761 129.638 106.173 1.00 29.36 N
ATOM 23 N3 G A 523 32.934 128.989 107.385 1.00 33.13 N
ATOM 24 C4 G A 523 32.437 128.938 108.633 1.00 33.83 C
ATOM 25 P A A 524 28.191 125.435 105.074 1.00 40.54 P
ATOM 26 OP1 A A 524 27.000 126.220 104.631 1.00 38.80 O
ATOM 27 OP2 A A 524 28.003 124.087 105.668 1.00 37.44 O
ATOM 28 O5' A A 524 29.215 125.318 103.858 1.00 39.57 O
TER
ATOM 1 O3' A B2027 33.770 127.229 122.697 1.00 34.13 O
ATOM 2 P G B2028 32.602 128.327 122.638 1.00 34.40 P
ATOM 3 OP1 G B2028 32.524 128.953 123.980 1.00 37.41 O
ATOM 4 OP2 G B2028 31.390 127.714 122.032 1.00 31.66 O
ATOM 5 O5' G B2028 33.156 129.437 121.641 1.00 34.43 O
ATOM 6 C5' G B2028 34.378 130.140 121.930 1.00 35.26 C
ATOM 7 C4' G B2028 34.969 130.712 120.663 1.00 33.83 C
ATOM 8 O4' G B2028 35.161 129.644 119.694 1.00 35.48 O
ATOM 9 C3' G B2028 34.110 131.717 119.915 1.00 34.09 C
ATOM 10 O3' G B2028 34.219 133.021 120.484 1.00 35.02 O
ATOM 11 C2' G B2028 34.699 131.655 118.510 1.00 33.29 C
ATOM 12 O2' G B2028 35.909 132.371 118.389 1.00 32.90 O
ATOM 13 C1' G B2028 35.017 130.165 118.383 1.00 33.49 C
ATOM 14 N9 G B2028 34.002 129.404 117.656 1.00 32.47 N
ATOM 15 C8 G B2028 33.081 128.508 118.153 1.00 32.22 C
ATOM 16 N7 G B2028 32.312 127.997 117.227 1.00 30.18 N
ATOM 17 C5 G B2028 32.750 128.594 116.050 1.00 32.06 C
ATOM 18 C6 G B2028 32.291 128.456 114.709 1.00 30.16 C
ATOM 19 O6 G B2028 31.371 127.763 114.274 1.00 31.55 O
ATOM 20 N1 G B2028 33.020 129.247 113.837 1.00 29.33 N
ATOM 21 C2 G B2028 34.052 130.073 114.193 1.00 30.87 C
ATOM 22 N2 G B2028 34.643 130.748 113.198 1.00 29.58 N
ATOM 23 N3 G B2028 34.479 130.225 115.431 1.00 31.65 N
ATOM 24 C4 G B2028 33.792 129.461 116.301 1.00 31.76 C
ATOM 25 P A B2029 33.099 134.125 120.163 1.00 34.77 P
ATOM 26 OP1 A B2029 33.560 135.436 120.671 1.00 36.37 O
ATOM 27 OP2 A B2029 31.789 133.584 120.610 1.00 37.50 O
ATOM 28 O5' A B2029 33.075 134.189 118.572 1.00 36.63 O
TER
Atoms:
OP1: (24.360,128.149,108.961)
OP2: (25.626,128.412,111.176)
C3': (28.332,126.856,107.258)
C1': (30.246,127.921,108.022)
C5': (26.966,128.996,107.645)
O6: (34.984,130.345,110.699)
O4': (29.369,128.954,107.652)
C8: (31.105,128.575,110.342)
C2: (34.130,129.522,107.350)
C6: (34.299,129.925,109.765)
C5: (33.009,129.355,109.809)
C4: (32.437,128.938,108.633)
P: (25.429,128.805,109.755)
C4': (28.190,128.364,107.050)
C2': (29.326,126.776,108.410)
O2': (30.039,125.557,108.417)
N1: (34.791,129.975,108.463)
N2: (34.761,129.638,106.173)
N3: (32.934,128.989,107.385)
N7: (32.159,129.122,110.882)
N9: (31.212,128.445,108.976)
O5': (26.807,128.573,109.002)
O3': (28.992,126.339,106.117)
OP2: (25.626,128.412,111.176)
C3': (28.332,126.856,107.258)
C1': (30.246,127.921,108.022)
C5': (26.966,128.996,107.645)
O6: (34.984,130.345,110.699)
O4': (29.369,128.954,107.652)
C8: (31.105,128.575,110.342)
C2: (34.130,129.522,107.350)
C6: (34.299,129.925,109.765)
C5: (33.009,129.355,109.809)
C4: (32.437,128.938,108.633)
P: (25.429,128.805,109.755)
C4': (28.190,128.364,107.050)
C2': (29.326,126.776,108.410)
O2': (30.039,125.557,108.417)
N1: (34.791,129.975,108.463)
N2: (34.761,129.638,106.173)
N3: (32.934,128.989,107.385)
N7: (32.159,129.122,110.882)
N9: (31.212,128.445,108.976)
O5': (26.807,128.573,109.002)
O3': (28.992,126.339,106.117)
OP1: (32.524,128.953,123.980)
OP2: (31.390,127.714,122.032)
C3': (34.110,131.717,119.915)
C1': (35.017,130.165,118.383)
C5': (34.378,130.140,121.930)
O6: (31.371,127.763,114.274)
O4': (35.161,129.644,119.694)
C8: (33.081,128.508,118.153)
C2: (34.052,130.073,114.193)
C6: (32.291,128.456,114.709)
C5: (32.750,128.594,116.050)
C4: (33.792,129.461,116.301)
P: (32.602,128.327,122.638)
C4': (34.969,130.712,120.663)
C2': (34.699,131.655,118.510)
O2': (35.909,132.371,118.389)
N1: (33.020,129.247,113.837)
N2: (34.643,130.748,113.198)
N3: (34.479,130.225,115.431)
N7: (32.312,127.997,117.227)
N9: (34.002,129.404,117.656)
O5': (33.156,129.437,121.641)
O3': (34.219,133.021,120.484)
OP2: (31.390,127.714,122.032)
C3': (34.110,131.717,119.915)
C1': (35.017,130.165,118.383)
C5': (34.378,130.140,121.930)
O6: (31.371,127.763,114.274)
O4': (35.161,129.644,119.694)
C8: (33.081,128.508,118.153)
C2: (34.052,130.073,114.193)
C6: (32.291,128.456,114.709)
C5: (32.750,128.594,116.050)
C4: (33.792,129.461,116.301)
P: (32.602,128.327,122.638)
C4': (34.969,130.712,120.663)
C2': (34.699,131.655,118.510)
O2': (35.909,132.371,118.389)
N1: (33.020,129.247,113.837)
N2: (34.643,130.748,113.198)
N3: (34.479,130.225,115.431)
N7: (32.312,127.997,117.227)
N9: (34.002,129.404,117.656)
O5': (33.156,129.437,121.641)
O3': (34.219,133.021,120.484)
Image (generated by PyMOL):