Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YI2:0523:02028
Extra
PDB:
ATOM 1 O3' C A 522 25.261 130.971 109.645 1.00 47.52 O
ATOM 2 P G A 523 25.527 129.398 109.800 1.00 50.96 P
ATOM 3 OP1 G A 523 24.462 128.687 109.050 1.00 52.36 O
ATOM 4 OP2 G A 523 25.763 129.055 111.235 1.00 51.91 O
ATOM 5 O5' G A 523 26.892 129.206 109.009 1.00 50.02 O
ATOM 6 C5' G A 523 26.973 129.539 107.620 1.00 45.85 C
ATOM 7 C4' G A 523 28.178 128.889 107.004 1.00 43.33 C
ATOM 8 O4' G A 523 29.373 129.470 107.583 1.00 43.10 O
ATOM 9 C3' G A 523 28.316 127.381 107.208 1.00 42.70 C
ATOM 10 O3' G A 523 28.998 126.883 106.068 1.00 44.72 O
ATOM 11 C2' G A 523 29.304 127.300 108.364 1.00 42.11 C
ATOM 12 O2' G A 523 30.017 126.084 108.380 1.00 43.08 O
ATOM 13 C1' G A 523 30.236 128.430 107.965 1.00 42.29 C
ATOM 14 N9 G A 523 31.215 128.949 108.908 1.00 42.09 N
ATOM 15 C8 G A 523 31.127 129.071 110.274 1.00 42.43 C
ATOM 16 N7 G A 523 32.181 129.631 110.802 1.00 41.65 N
ATOM 17 C5 G A 523 33.013 129.879 109.719 1.00 41.33 C
ATOM 18 C6 G A 523 34.290 130.474 109.659 1.00 41.02 C
ATOM 19 O6 G A 523 34.973 130.927 110.585 1.00 40.24 O
ATOM 20 N1 G A 523 34.772 130.518 108.352 1.00 39.82 N
ATOM 21 C2 G A 523 34.107 130.046 107.248 1.00 39.64 C
ATOM 22 N2 G A 523 34.731 130.151 106.066 1.00 39.30 N
ATOM 23 N3 G A 523 32.916 129.504 107.294 1.00 40.68 N
ATOM 24 C4 G A 523 32.432 129.451 108.550 1.00 41.79 C
ATOM 25 P A A 524 28.235 125.957 105.013 1.00 45.44 P
ATOM 26 OP1 A A 524 27.027 126.697 104.562 1.00 45.83 O
ATOM 27 OP2 A A 524 28.081 124.602 105.598 1.00 44.23 O
ATOM 28 O5' A A 524 29.284 125.886 103.814 1.00 43.57 O
TER
ATOM 1 O3' A B2027 33.669 127.819 122.563 1.00 42.59 O
ATOM 2 P G B2028 32.528 128.942 122.451 1.00 44.10 P
ATOM 3 OP1 G B2028 32.427 129.611 123.774 1.00 44.43 O
ATOM 4 OP2 G B2028 31.315 128.347 121.825 1.00 40.79 O
ATOM 5 O5' G B2028 33.135 130.003 121.439 1.00 42.14 O
ATOM 6 C5' G B2028 34.320 130.730 121.771 1.00 42.20 C
ATOM 7 C4' G B2028 34.913 131.347 120.527 1.00 42.47 C
ATOM 8 O4' G B2028 35.136 130.304 119.542 1.00 42.63 O
ATOM 9 C3' G B2028 34.049 132.354 119.787 1.00 41.15 C
ATOM 10 O3' G B2028 34.159 133.643 120.364 1.00 40.62 O
ATOM 11 C2' G B2028 34.665 132.328 118.398 1.00 41.98 C
ATOM 12 O2' G B2028 35.885 133.036 118.340 1.00 44.44 O
ATOM 13 C1' G B2028 34.981 130.844 118.244 1.00 42.14 C
ATOM 14 N9 G B2028 33.936 130.109 117.540 1.00 41.70 N
ATOM 15 C8 G B2028 32.991 129.258 118.063 1.00 41.10 C
ATOM 16 N7 G B2028 32.219 128.735 117.149 1.00 41.27 N
ATOM 17 C5 G B2028 32.678 129.279 115.957 1.00 40.98 C
ATOM 18 C6 G B2028 32.238 129.088 114.624 1.00 40.60 C
ATOM 19 O6 G B2028 31.327 128.368 114.206 1.00 42.25 O
ATOM 20 N1 G B2028 32.980 129.842 113.732 1.00 41.26 N
ATOM 21 C2 G B2028 34.014 130.674 114.071 1.00 40.31 C
ATOM 22 N2 G B2028 34.610 131.327 113.069 1.00 41.11 N
ATOM 23 N3 G B2028 34.433 130.856 115.299 1.00 40.34 N
ATOM 24 C4 G B2028 33.728 130.135 116.185 1.00 40.95 C
ATOM 25 P A B2029 33.038 134.753 120.062 1.00 41.92 P
ATOM 26 OP1 A B2029 33.548 136.026 120.625 1.00 40.19 O
ATOM 27 OP2 A B2029 31.722 134.229 120.503 1.00 42.34 O
ATOM 28 O5' A B2029 33.003 134.867 118.471 1.00 41.60 O
TER
ATOM 2 P G A 523 25.527 129.398 109.800 1.00 50.96 P
ATOM 3 OP1 G A 523 24.462 128.687 109.050 1.00 52.36 O
ATOM 4 OP2 G A 523 25.763 129.055 111.235 1.00 51.91 O
ATOM 5 O5' G A 523 26.892 129.206 109.009 1.00 50.02 O
ATOM 6 C5' G A 523 26.973 129.539 107.620 1.00 45.85 C
ATOM 7 C4' G A 523 28.178 128.889 107.004 1.00 43.33 C
ATOM 8 O4' G A 523 29.373 129.470 107.583 1.00 43.10 O
ATOM 9 C3' G A 523 28.316 127.381 107.208 1.00 42.70 C
ATOM 10 O3' G A 523 28.998 126.883 106.068 1.00 44.72 O
ATOM 11 C2' G A 523 29.304 127.300 108.364 1.00 42.11 C
ATOM 12 O2' G A 523 30.017 126.084 108.380 1.00 43.08 O
ATOM 13 C1' G A 523 30.236 128.430 107.965 1.00 42.29 C
ATOM 14 N9 G A 523 31.215 128.949 108.908 1.00 42.09 N
ATOM 15 C8 G A 523 31.127 129.071 110.274 1.00 42.43 C
ATOM 16 N7 G A 523 32.181 129.631 110.802 1.00 41.65 N
ATOM 17 C5 G A 523 33.013 129.879 109.719 1.00 41.33 C
ATOM 18 C6 G A 523 34.290 130.474 109.659 1.00 41.02 C
ATOM 19 O6 G A 523 34.973 130.927 110.585 1.00 40.24 O
ATOM 20 N1 G A 523 34.772 130.518 108.352 1.00 39.82 N
ATOM 21 C2 G A 523 34.107 130.046 107.248 1.00 39.64 C
ATOM 22 N2 G A 523 34.731 130.151 106.066 1.00 39.30 N
ATOM 23 N3 G A 523 32.916 129.504 107.294 1.00 40.68 N
ATOM 24 C4 G A 523 32.432 129.451 108.550 1.00 41.79 C
ATOM 25 P A A 524 28.235 125.957 105.013 1.00 45.44 P
ATOM 26 OP1 A A 524 27.027 126.697 104.562 1.00 45.83 O
ATOM 27 OP2 A A 524 28.081 124.602 105.598 1.00 44.23 O
ATOM 28 O5' A A 524 29.284 125.886 103.814 1.00 43.57 O
TER
ATOM 1 O3' A B2027 33.669 127.819 122.563 1.00 42.59 O
ATOM 2 P G B2028 32.528 128.942 122.451 1.00 44.10 P
ATOM 3 OP1 G B2028 32.427 129.611 123.774 1.00 44.43 O
ATOM 4 OP2 G B2028 31.315 128.347 121.825 1.00 40.79 O
ATOM 5 O5' G B2028 33.135 130.003 121.439 1.00 42.14 O
ATOM 6 C5' G B2028 34.320 130.730 121.771 1.00 42.20 C
ATOM 7 C4' G B2028 34.913 131.347 120.527 1.00 42.47 C
ATOM 8 O4' G B2028 35.136 130.304 119.542 1.00 42.63 O
ATOM 9 C3' G B2028 34.049 132.354 119.787 1.00 41.15 C
ATOM 10 O3' G B2028 34.159 133.643 120.364 1.00 40.62 O
ATOM 11 C2' G B2028 34.665 132.328 118.398 1.00 41.98 C
ATOM 12 O2' G B2028 35.885 133.036 118.340 1.00 44.44 O
ATOM 13 C1' G B2028 34.981 130.844 118.244 1.00 42.14 C
ATOM 14 N9 G B2028 33.936 130.109 117.540 1.00 41.70 N
ATOM 15 C8 G B2028 32.991 129.258 118.063 1.00 41.10 C
ATOM 16 N7 G B2028 32.219 128.735 117.149 1.00 41.27 N
ATOM 17 C5 G B2028 32.678 129.279 115.957 1.00 40.98 C
ATOM 18 C6 G B2028 32.238 129.088 114.624 1.00 40.60 C
ATOM 19 O6 G B2028 31.327 128.368 114.206 1.00 42.25 O
ATOM 20 N1 G B2028 32.980 129.842 113.732 1.00 41.26 N
ATOM 21 C2 G B2028 34.014 130.674 114.071 1.00 40.31 C
ATOM 22 N2 G B2028 34.610 131.327 113.069 1.00 41.11 N
ATOM 23 N3 G B2028 34.433 130.856 115.299 1.00 40.34 N
ATOM 24 C4 G B2028 33.728 130.135 116.185 1.00 40.95 C
ATOM 25 P A B2029 33.038 134.753 120.062 1.00 41.92 P
ATOM 26 OP1 A B2029 33.548 136.026 120.625 1.00 40.19 O
ATOM 27 OP2 A B2029 31.722 134.229 120.503 1.00 42.34 O
ATOM 28 O5' A B2029 33.003 134.867 118.471 1.00 41.60 O
TER
Atoms:
OP1: (24.462,128.687,109.050)
OP2: (25.763,129.055,111.235)
C3': (28.316,127.381,107.208)
C1': (30.236,128.430,107.965)
C5': (26.973,129.539,107.620)
O6: (34.973,130.927,110.585)
O4': (29.373,129.470,107.583)
C8: (31.127,129.071,110.274)
C2: (34.107,130.046,107.248)
C6: (34.290,130.474,109.659)
C5: (33.013,129.879,109.719)
C4: (32.432,129.451,108.550)
P: (25.527,129.398,109.800)
C4': (28.178,128.889,107.004)
C2': (29.304,127.300,108.364)
O2': (30.017,126.084,108.380)
N1: (34.772,130.518,108.352)
N2: (34.731,130.151,106.066)
N3: (32.916,129.504,107.294)
N7: (32.181,129.631,110.802)
N9: (31.215,128.949,108.908)
O5': (26.892,129.206,109.009)
O3': (28.998,126.883,106.068)
OP2: (25.763,129.055,111.235)
C3': (28.316,127.381,107.208)
C1': (30.236,128.430,107.965)
C5': (26.973,129.539,107.620)
O6: (34.973,130.927,110.585)
O4': (29.373,129.470,107.583)
C8: (31.127,129.071,110.274)
C2: (34.107,130.046,107.248)
C6: (34.290,130.474,109.659)
C5: (33.013,129.879,109.719)
C4: (32.432,129.451,108.550)
P: (25.527,129.398,109.800)
C4': (28.178,128.889,107.004)
C2': (29.304,127.300,108.364)
O2': (30.017,126.084,108.380)
N1: (34.772,130.518,108.352)
N2: (34.731,130.151,106.066)
N3: (32.916,129.504,107.294)
N7: (32.181,129.631,110.802)
N9: (31.215,128.949,108.908)
O5': (26.892,129.206,109.009)
O3': (28.998,126.883,106.068)
OP1: (32.427,129.611,123.774)
OP2: (31.315,128.347,121.825)
C3': (34.049,132.354,119.787)
C1': (34.981,130.844,118.244)
C5': (34.320,130.730,121.771)
O6: (31.327,128.368,114.206)
O4': (35.136,130.304,119.542)
C8: (32.991,129.258,118.063)
C2: (34.014,130.674,114.071)
C6: (32.238,129.088,114.624)
C5: (32.678,129.279,115.957)
C4: (33.728,130.135,116.185)
P: (32.528,128.942,122.451)
C4': (34.913,131.347,120.527)
C2': (34.665,132.328,118.398)
O2': (35.885,133.036,118.340)
N1: (32.980,129.842,113.732)
N2: (34.610,131.327,113.069)
N3: (34.433,130.856,115.299)
N7: (32.219,128.735,117.149)
N9: (33.936,130.109,117.540)
O5': (33.135,130.003,121.439)
O3': (34.159,133.643,120.364)
OP2: (31.315,128.347,121.825)
C3': (34.049,132.354,119.787)
C1': (34.981,130.844,118.244)
C5': (34.320,130.730,121.771)
O6: (31.327,128.368,114.206)
O4': (35.136,130.304,119.542)
C8: (32.991,129.258,118.063)
C2: (34.014,130.674,114.071)
C6: (32.238,129.088,114.624)
C5: (32.678,129.279,115.957)
C4: (33.728,130.135,116.185)
P: (32.528,128.942,122.451)
C4': (34.913,131.347,120.527)
C2': (34.665,132.328,118.398)
O2': (35.885,133.036,118.340)
N1: (32.980,129.842,113.732)
N2: (34.610,131.327,113.069)
N3: (34.433,130.856,115.299)
N7: (32.219,128.735,117.149)
N9: (33.936,130.109,117.540)
O5': (33.135,130.003,121.439)
O3': (34.159,133.643,120.364)
Image (generated by PyMOL):