ClaRNA

Doublet info:

Details

Nucleotide types: GG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YIT:0523:02028

Extra

PDB:
ATOM 1 O3' C A 522 25.448 131.017 109.551 1.00 39.74 O
ATOM 2 P G A 523 25.706 129.437 109.645 1.00 43.12 P
ATOM 3 OP1 G A 523 24.637 128.787 108.843 1.00 44.50 O
ATOM 4 OP2 G A 523 25.915 129.022 111.062 1.00 41.95 O
ATOM 5 O5' G A 523 27.078 129.252 108.860 1.00 41.35 O
ATOM 6 C5' G A 523 27.148 129.490 107.451 1.00 37.34 C
ATOM 7 C4' G A 523 28.373 128.837 106.878 1.00 36.42 C
ATOM 8 O4' G A 523 29.546 129.461 107.457 1.00 37.57 O
ATOM 9 C3' G A 523 28.528 127.341 107.151 1.00 36.76 C
ATOM 10 O3' G A 523 29.225 126.780 106.053 1.00 38.36 O
ATOM 11 C2' G A 523 29.515 127.327 108.311 1.00 37.32 C
ATOM 12 O2' G A 523 30.240 126.120 108.387 1.00 39.41 O
ATOM 13 C1' G A 523 30.432 128.451 107.861 1.00 37.68 C
ATOM 14 N9 G A 523 31.412 129.005 108.785 1.00 39.12 N
ATOM 15 C8 G A 523 31.331 129.143 110.149 1.00 39.76 C
ATOM 16 N7 G A 523 32.395 129.691 110.669 1.00 38.15 N
ATOM 17 C5 G A 523 33.222 129.927 109.582 1.00 37.86 C
ATOM 18 C6 G A 523 34.504 130.509 109.515 1.00 38.89 C
ATOM 19 O6 G A 523 35.196 130.958 110.439 1.00 39.21 O
ATOM 20 N1 G A 523 34.980 130.544 108.207 1.00 38.11 N
ATOM 21 C2 G A 523 34.305 130.077 107.109 1.00 37.80 C
ATOM 22 N2 G A 523 34.929 130.163 105.930 1.00 38.35 N
ATOM 23 N3 G A 523 33.105 129.552 107.161 1.00 39.10 N
ATOM 24 C4 G A 523 32.628 129.505 108.417 1.00 38.58 C
ATOM 25 P A A 524 28.430 126.016 104.899 1.00 39.62 P
ATOM 26 OP1 A A 524 27.328 126.910 104.478 1.00 41.62 O
ATOM 27 OP2 A A 524 28.126 124.631 105.335 1.00 38.71 O
ATOM 28 O5' A A 524 29.502 125.938 103.727 1.00 39.03 O
TER

ATOM 1 O3' A B2027 33.866 127.827 122.461 1.00 36.40 O
ATOM 2 P G B2028 32.716 128.942 122.394 1.00 37.18 P
ATOM 3 OP1 G B2028 32.654 129.604 123.723 1.00 35.22 O
ATOM 4 OP2 G B2028 31.493 128.323 121.809 1.00 33.04 O
ATOM 5 O5' G B2028 33.285 130.022 121.375 1.00 37.03 O
ATOM 6 C5' G B2028 34.472 130.770 121.692 1.00 36.96 C
ATOM 7 C4' G B2028 35.063 131.374 120.440 1.00 37.39 C
ATOM 8 O4' G B2028 35.292 130.322 119.465 1.00 38.90 O
ATOM 9 C3' G B2028 34.201 132.372 119.686 1.00 36.14 C
ATOM 10 O3' G B2028 34.311 133.666 120.248 1.00 37.02 O
ATOM 11 C2' G B2028 34.824 132.337 118.301 1.00 36.33 C
ATOM 12 O2' G B2028 36.037 133.054 118.249 1.00 37.49 O
ATOM 13 C1' G B2028 35.151 130.853 118.158 1.00 37.05 C
ATOM 14 N9 G B2028 34.130 130.102 117.435 1.00 35.90 N
ATOM 15 C8 G B2028 33.212 129.212 117.936 1.00 34.55 C
ATOM 16 N7 G B2028 32.459 128.683 117.012 1.00 34.47 N
ATOM 17 C5 G B2028 32.901 129.267 115.833 1.00 35.86 C
ATOM 18 C6 G B2028 32.470 129.090 114.492 1.00 35.50 C
ATOM 19 O6 G B2028 31.583 128.354 114.057 1.00 37.49 O
ATOM 20 N1 G B2028 33.192 129.883 113.616 1.00 35.86 N
ATOM 21 C2 G B2028 34.201 130.735 113.972 1.00 36.31 C
ATOM 22 N2 G B2028 34.797 131.404 112.976 1.00 37.72 N
ATOM 23 N3 G B2028 34.605 130.916 115.210 1.00 36.87 N
ATOM 24 C4 G B2028 33.922 130.152 116.082 1.00 36.30 C
ATOM 25 P A B2029 33.229 134.792 119.878 1.00 38.45 P
ATOM 26 OP1 A B2029 33.736 136.083 120.395 1.00 37.47 O
ATOM 27 OP2 A B2029 31.890 134.308 120.292 1.00 40.07 O
ATOM 28 O5' A B2029 33.240 134.845 118.288 1.00 40.11 O
TER

Atoms:
OP1: (24.637,128.787,108.843)
OP2: (25.915,129.022,111.062)
C3': (28.528,127.341,107.151)
C1': (30.432,128.451,107.861)
C5': (27.148,129.490,107.451)
O6: (35.196,130.958,110.439)
O4': (29.546,129.461,107.457)
C8: (31.331,129.143,110.149)
C2: (34.305,130.077,107.109)
C6: (34.504,130.509,109.515)
C5: (33.222,129.927,109.582)
C4: (32.628,129.505,108.417)
P: (25.706,129.437,109.645)
C4': (28.373,128.837,106.878)
C2': (29.515,127.327,108.311)
O2': (30.240,126.120,108.387)
N1: (34.980,130.544,108.207)
N2: (34.929,130.163,105.930)
N3: (33.105,129.552,107.161)
N7: (32.395,129.691,110.669)
N9: (31.412,129.005,108.785)
O5': (27.078,129.252,108.860)
O3': (29.225,126.780,106.053)
OP1: (32.654,129.604,123.723)
OP2: (31.493,128.323,121.809)
C3': (34.201,132.372,119.686)
C1': (35.151,130.853,118.158)
C5': (34.472,130.770,121.692)
O6: (31.583,128.354,114.057)
O4': (35.292,130.322,119.465)
C8: (33.212,129.212,117.936)
C2: (34.201,130.735,113.972)
C6: (32.470,129.090,114.492)
C5: (32.901,129.267,115.833)
C4: (33.922,130.152,116.082)
P: (32.716,128.942,122.394)
C4': (35.063,131.374,120.440)
C2': (34.824,132.337,118.301)
O2': (36.037,133.054,118.249)
N1: (33.192,129.883,113.616)
N2: (34.797,131.404,112.976)
N3: (34.605,130.916,115.210)
N7: (32.459,128.683,117.012)
N9: (34.130,130.102,117.435)
O5': (33.285,130.022,121.375)
O3': (34.311,133.666,120.248)
Image (generated by PyMOL):
PyMOL image
show in jmol