ClaRNA

Doublet info:

Details

Nucleotide types: GG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YJ9:0523:02028

Extra

PDB:
ATOM 1 O3' C A 522 25.511 131.379 109.935 1.00 57.71 O
ATOM 2 P G A 523 25.578 129.781 110.087 1.00 59.04 P
ATOM 3 OP1 G A 523 24.403 129.236 109.349 1.00 59.57 O
ATOM 4 OP2 G A 523 25.799 129.397 111.518 1.00 58.29 O
ATOM 5 O5' G A 523 26.877 129.411 109.249 1.00 56.85 O
ATOM 6 C5' G A 523 27.019 129.890 107.911 1.00 53.37 C
ATOM 7 C4' G A 523 28.252 129.315 107.271 1.00 51.77 C
ATOM 8 O4' G A 523 29.432 129.885 107.891 1.00 51.59 O
ATOM 9 C3' G A 523 28.438 127.804 107.354 1.00 51.42 C
ATOM 10 O3' G A 523 29.046 127.446 106.125 1.00 52.85 O
ATOM 11 C2' G A 523 29.471 127.665 108.473 1.00 49.75 C
ATOM 12 O2' G A 523 30.246 126.493 108.407 1.00 50.38 O
ATOM 13 C1' G A 523 30.352 128.852 108.139 1.00 50.19 C
ATOM 14 N9 G A 523 31.337 129.323 109.102 1.00 50.30 N
ATOM 15 C8 G A 523 31.224 129.434 110.465 1.00 50.88 C
ATOM 16 N7 G A 523 32.276 129.974 111.018 1.00 49.64 N
ATOM 17 C5 G A 523 33.132 130.220 109.956 1.00 48.34 C
ATOM 18 C6 G A 523 34.404 130.818 109.927 1.00 47.90 C
ATOM 19 O6 G A 523 35.047 131.297 110.860 1.00 48.94 O
ATOM 20 N1 G A 523 34.925 130.844 108.642 1.00 46.97 N
ATOM 21 C2 G A 523 34.295 130.367 107.528 1.00 46.78 C
ATOM 22 N2 G A 523 34.970 130.443 106.381 1.00 48.91 N
ATOM 23 N3 G A 523 33.096 129.842 107.537 1.00 46.92 N
ATOM 24 C4 G A 523 32.577 129.797 108.775 1.00 48.72 C
ATOM 25 P A A 524 28.551 126.148 105.336 1.00 55.70 P
ATOM 26 OP1 A A 524 27.138 126.359 104.932 1.00 55.39 O
ATOM 27 OP2 A A 524 28.912 124.951 106.143 1.00 54.21 O
ATOM 28 O5' A A 524 29.476 126.148 104.039 1.00 54.96 O
TER

ATOM 1 O3' A B2027 33.687 128.145 122.884 1.00 43.43 O
ATOM 2 P G B2028 32.576 129.282 122.700 1.00 43.50 P
ATOM 3 OP1 G B2028 32.406 129.951 124.015 1.00 42.91 O
ATOM 4 OP2 G B2028 31.405 128.674 122.016 1.00 39.60 O
ATOM 5 O5' G B2028 33.243 130.333 121.708 1.00 41.92 O
ATOM 6 C5' G B2028 34.452 131.032 122.062 1.00 40.54 C
ATOM 7 C4' G B2028 35.048 131.687 120.836 1.00 41.70 C
ATOM 8 O4' G B2028 35.270 130.664 119.832 1.00 43.66 O
ATOM 9 C3' G B2028 34.165 132.697 120.120 1.00 41.01 C
ATOM 10 O3' G B2028 34.290 133.987 120.678 1.00 42.44 O
ATOM 11 C2' G B2028 34.717 132.683 118.705 1.00 41.06 C
ATOM 12 O2' G B2028 35.878 133.460 118.549 1.00 42.91 O
ATOM 13 C1' G B2028 35.084 131.215 118.542 1.00 41.22 C
ATOM 14 N9 G B2028 34.064 130.455 117.832 1.00 42.00 N
ATOM 15 C8 G B2028 33.136 129.572 118.336 1.00 41.72 C
ATOM 16 N7 G B2028 32.396 129.030 117.409 1.00 41.53 N
ATOM 17 C5 G B2028 32.856 129.603 116.230 1.00 43.02 C
ATOM 18 C6 G B2028 32.445 129.415 114.891 1.00 43.21 C
ATOM 19 O6 G B2028 31.555 128.686 114.456 1.00 46.87 O
ATOM 20 N1 G B2028 33.188 130.193 114.014 1.00 43.22 N
ATOM 21 C2 G B2028 34.194 131.051 114.378 1.00 43.61 C
ATOM 22 N2 G B2028 34.808 131.720 113.393 1.00 44.70 N
ATOM 23 N3 G B2028 34.576 131.241 115.617 1.00 42.72 N
ATOM 24 C4 G B2028 33.875 130.488 116.483 1.00 42.74 C
ATOM 25 P A B2029 33.165 135.088 120.386 1.00 45.23 P
ATOM 26 OP1 A B2029 33.618 136.356 121.011 1.00 45.35 O
ATOM 27 OP2 A B2029 31.863 134.484 120.780 1.00 48.06 O
ATOM 28 O5' A B2029 33.146 135.262 118.801 1.00 46.55 O
TER

Atoms:
OP1: (24.403,129.236,109.349)
OP2: (25.799,129.397,111.518)
C3': (28.438,127.804,107.354)
C1': (30.352,128.852,108.139)
C5': (27.019,129.890,107.911)
O6: (35.047,131.297,110.860)
O4': (29.432,129.885,107.891)
C8: (31.224,129.434,110.465)
C2: (34.295,130.367,107.528)
C6: (34.404,130.818,109.927)
C5: (33.132,130.220,109.956)
C4: (32.577,129.797,108.775)
P: (25.578,129.781,110.087)
C4': (28.252,129.315,107.271)
C2': (29.471,127.665,108.473)
O2': (30.246,126.493,108.407)
N1: (34.925,130.844,108.642)
N2: (34.970,130.443,106.381)
N3: (33.096,129.842,107.537)
N7: (32.276,129.974,111.018)
N9: (31.337,129.323,109.102)
O5': (26.877,129.411,109.249)
O3': (29.046,127.446,106.125)
OP1: (32.406,129.951,124.015)
OP2: (31.405,128.674,122.016)
C3': (34.165,132.697,120.120)
C1': (35.084,131.215,118.542)
C5': (34.452,131.032,122.062)
O6: (31.555,128.686,114.456)
O4': (35.270,130.664,119.832)
C8: (33.136,129.572,118.336)
C2: (34.194,131.051,114.378)
C6: (32.445,129.415,114.891)
C5: (32.856,129.603,116.230)
C4: (33.875,130.488,116.483)
P: (32.576,129.282,122.700)
C4': (35.048,131.687,120.836)
C2': (34.717,132.683,118.705)
O2': (35.878,133.460,118.549)
N1: (33.188,130.193,114.014)
N2: (34.808,131.720,113.393)
N3: (34.576,131.241,115.617)
N7: (32.396,129.030,117.409)
N9: (34.064,130.455,117.832)
O5': (33.243,130.333,121.708)
O3': (34.290,133.987,120.678)
Image (generated by PyMOL):
PyMOL image
show in jmol