ClaRNA

Doublet info:

Details

Nucleotide types: GG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YJN:0523:02028

Extra

PDB:
ATOM 1 O3' C A 522 25.401 131.170 109.607 1.00 48.14 O
ATOM 2 P G A 523 25.629 129.582 109.730 1.00 49.61 P
ATOM 3 OP1 G A 523 24.533 128.921 108.981 1.00 50.73 O
ATOM 4 OP2 G A 523 25.874 129.205 111.157 1.00 49.49 O
ATOM 5 O5' G A 523 26.978 129.351 108.919 1.00 46.58 O
ATOM 6 C5' G A 523 27.050 129.646 107.522 1.00 41.64 C
ATOM 7 C4' G A 523 28.263 128.990 106.919 1.00 40.09 C
ATOM 8 O4' G A 523 29.458 129.595 107.472 1.00 39.28 O
ATOM 9 C3' G A 523 28.416 127.493 107.175 1.00 39.57 C
ATOM 10 O3' G A 523 29.098 126.957 106.059 1.00 41.62 O
ATOM 11 C2' G A 523 29.402 127.465 108.332 1.00 39.07 C
ATOM 12 O2' G A 523 30.116 126.255 108.425 1.00 39.91 O
ATOM 13 C1' G A 523 30.330 128.574 107.877 1.00 39.79 C
ATOM 14 N9 G A 523 31.305 129.119 108.810 1.00 41.87 N
ATOM 15 C8 G A 523 31.204 129.262 110.171 1.00 43.25 C
ATOM 16 N7 G A 523 32.258 129.819 110.702 1.00 42.54 N
ATOM 17 C5 G A 523 33.101 130.048 109.626 1.00 42.27 C
ATOM 18 C6 G A 523 34.384 130.632 109.576 1.00 43.25 C
ATOM 19 O6 G A 523 35.065 131.081 110.507 1.00 44.10 O
ATOM 20 N1 G A 523 34.876 130.665 108.277 1.00 42.51 N
ATOM 21 C2 G A 523 34.220 130.188 107.174 1.00 42.76 C
ATOM 22 N2 G A 523 34.865 130.281 106.006 1.00 44.35 N
ATOM 23 N3 G A 523 33.023 129.650 107.209 1.00 41.86 N
ATOM 24 C4 G A 523 32.527 129.612 108.456 1.00 41.83 C
ATOM 25 P A A 524 28.333 126.000 105.038 1.00 44.41 P
ATOM 26 OP1 A A 524 27.105 126.711 104.610 1.00 45.65 O
ATOM 27 OP2 A A 524 28.229 124.641 105.625 1.00 43.61 O
ATOM 28 O5' A A 524 29.333 125.936 103.802 1.00 43.93 O
TER

ATOM 1 O3' A B2027 33.695 128.010 122.490 1.00 40.43 O
ATOM 2 P G B2028 32.520 129.091 122.359 1.00 42.04 P
ATOM 3 OP1 G B2028 32.360 129.772 123.672 1.00 40.95 O
ATOM 4 OP2 G B2028 31.350 128.421 121.725 1.00 38.69 O
ATOM 5 O5' G B2028 33.115 130.168 121.349 1.00 41.54 O
ATOM 6 C5' G B2028 34.338 130.868 121.660 1.00 40.90 C
ATOM 7 C4' G B2028 34.959 131.435 120.403 1.00 40.73 C
ATOM 8 O4' G B2028 35.161 130.374 119.433 1.00 41.82 O
ATOM 9 C3' G B2028 34.134 132.451 119.644 1.00 40.07 C
ATOM 10 O3' G B2028 34.296 133.732 120.212 1.00 40.59 O
ATOM 11 C2' G B2028 34.749 132.388 118.256 1.00 40.25 C
ATOM 12 O2' G B2028 35.986 133.062 118.189 1.00 43.34 O
ATOM 13 C1' G B2028 35.038 130.896 118.125 1.00 39.62 C
ATOM 14 N9 G B2028 34.011 130.153 117.403 1.00 38.97 N
ATOM 15 C8 G B2028 33.124 129.231 117.903 1.00 38.67 C
ATOM 16 N7 G B2028 32.361 128.709 116.983 1.00 38.53 N
ATOM 17 C5 G B2028 32.762 129.334 115.810 1.00 38.92 C
ATOM 18 C6 G B2028 32.302 129.182 114.474 1.00 39.03 C
ATOM 19 O6 G B2028 31.419 128.437 114.036 1.00 39.07 O
ATOM 20 N1 G B2028 32.983 130.020 113.606 1.00 39.43 N
ATOM 21 C2 G B2028 33.973 130.892 113.963 1.00 39.45 C
ATOM 22 N2 G B2028 34.509 131.620 112.974 1.00 39.84 N
ATOM 23 N3 G B2028 34.409 131.042 115.193 1.00 39.94 N
ATOM 24 C4 G B2028 33.767 130.236 116.059 1.00 39.03 C
ATOM 25 P A B2029 33.169 134.842 119.990 1.00 43.67 P
ATOM 26 OP1 A B2029 33.686 136.121 120.540 1.00 42.28 O
ATOM 27 OP2 A B2029 31.876 134.291 120.475 1.00 43.21 O
ATOM 28 O5' A B2029 33.070 134.986 118.412 1.00 43.79 O
TER

Atoms:
OP1: (24.533,128.921,108.981)
OP2: (25.874,129.205,111.157)
C3': (28.416,127.493,107.175)
C1': (30.330,128.574,107.877)
C5': (27.050,129.646,107.522)
O6: (35.065,131.081,110.507)
O4': (29.458,129.595,107.472)
C8: (31.204,129.262,110.171)
C2: (34.220,130.188,107.174)
C6: (34.384,130.632,109.576)
C5: (33.101,130.048,109.626)
C4: (32.527,129.612,108.456)
P: (25.629,129.582,109.730)
C4': (28.263,128.990,106.919)
C2': (29.402,127.465,108.332)
O2': (30.116,126.255,108.425)
N1: (34.876,130.665,108.277)
N2: (34.865,130.281,106.006)
N3: (33.023,129.650,107.209)
N7: (32.258,129.819,110.702)
N9: (31.305,129.119,108.810)
O5': (26.978,129.351,108.919)
O3': (29.098,126.957,106.059)
OP1: (32.360,129.772,123.672)
OP2: (31.350,128.421,121.725)
C3': (34.134,132.451,119.644)
C1': (35.038,130.896,118.125)
C5': (34.338,130.868,121.660)
O6: (31.419,128.437,114.036)
O4': (35.161,130.374,119.433)
C8: (33.124,129.231,117.903)
C2: (33.973,130.892,113.963)
C6: (32.302,129.182,114.474)
C5: (32.762,129.334,115.810)
C4: (33.767,130.236,116.059)
P: (32.520,129.091,122.359)
C4': (34.959,131.435,120.403)
C2': (34.749,132.388,118.256)
O2': (35.986,133.062,118.189)
N1: (32.983,130.020,113.606)
N2: (34.509,131.620,112.974)
N3: (34.409,131.042,115.193)
N7: (32.361,128.709,116.983)
N9: (34.011,130.153,117.403)
O5': (33.115,130.168,121.349)
O3': (34.296,133.732,120.212)
Image (generated by PyMOL):
PyMOL image
show in jmol