ClaRNA

Doublet info:

Details

Nucleotide types: GG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YJW:0523:02028

Extra

PDB:
ATOM 1 O3' C A 522 25.151 130.897 109.564 1.00 41.34 O
ATOM 2 P G A 523 25.483 129.333 109.670 1.00 42.78 P
ATOM 3 OP1 G A 523 24.437 128.604 108.917 1.00 43.78 O
ATOM 4 OP2 G A 523 25.725 128.989 111.104 1.00 44.06 O
ATOM 5 O5' G A 523 26.868 129.197 108.898 1.00 40.82 O
ATOM 6 C5' G A 523 26.940 129.380 107.485 1.00 38.08 C
ATOM 7 C4' G A 523 28.150 128.672 106.934 1.00 38.86 C
ATOM 8 O4' G A 523 29.349 129.301 107.457 1.00 38.50 O
ATOM 9 C3' G A 523 28.291 127.185 107.266 1.00 39.29 C
ATOM 10 O3' G A 523 28.979 126.569 106.191 1.00 41.35 O
ATOM 11 C2' G A 523 29.296 127.196 108.409 1.00 39.37 C
ATOM 12 O2' G A 523 30.015 125.983 108.490 1.00 40.98 O
ATOM 13 C1' G A 523 30.219 128.297 107.913 1.00 37.93 C
ATOM 14 N9 G A 523 31.179 128.886 108.833 1.00 38.52 N
ATOM 15 C8 G A 523 31.078 129.070 110.191 1.00 38.73 C
ATOM 16 N7 G A 523 32.124 129.658 110.702 1.00 37.78 N
ATOM 17 C5 G A 523 32.961 129.866 109.616 1.00 37.64 C
ATOM 18 C6 G A 523 34.234 130.466 109.540 1.00 37.85 C
ATOM 19 O6 G A 523 34.909 130.958 110.449 1.00 39.41 O
ATOM 20 N1 G A 523 34.721 130.465 108.238 1.00 37.20 N
ATOM 21 C2 G A 523 34.064 129.951 107.151 1.00 38.65 C
ATOM 22 N2 G A 523 34.694 130.028 105.968 1.00 39.94 N
ATOM 23 N3 G A 523 32.877 129.396 107.212 1.00 38.59 N
ATOM 24 C4 G A 523 32.389 129.388 108.463 1.00 38.20 C
ATOM 25 P A A 524 28.164 125.868 105.014 1.00 42.89 P
ATOM 26 OP1 A A 524 27.034 126.770 104.656 1.00 43.25 O
ATOM 27 OP2 A A 524 27.893 124.459 105.408 1.00 41.49 O
ATOM 28 O5' A A 524 29.215 125.859 103.820 1.00 41.46 O
TER

ATOM 1 O3' A B2027 33.540 127.796 122.537 1.00 34.67 O
ATOM 2 P G B2028 32.456 128.972 122.434 1.00 36.42 P
ATOM 3 OP1 G B2028 32.430 129.679 123.743 1.00 34.76 O
ATOM 4 OP2 G B2028 31.207 128.393 121.879 1.00 33.72 O
ATOM 5 O5' G B2028 33.081 129.980 121.370 1.00 38.60 O
ATOM 6 C5' G B2028 34.317 130.676 121.657 1.00 38.64 C
ATOM 7 C4' G B2028 34.904 131.274 120.395 1.00 38.19 C
ATOM 8 O4' G B2028 35.137 130.228 119.415 1.00 39.61 O
ATOM 9 C3' G B2028 34.050 132.278 119.643 1.00 37.74 C
ATOM 10 O3' G B2028 34.143 133.569 120.216 1.00 37.45 O
ATOM 11 C2' G B2028 34.684 132.247 118.260 1.00 38.94 C
ATOM 12 O2' G B2028 35.912 132.939 118.197 1.00 39.34 O
ATOM 13 C1' G B2028 34.984 130.759 118.110 1.00 38.86 C
ATOM 14 N9 G B2028 33.921 130.036 117.417 1.00 38.88 N
ATOM 15 C8 G B2028 33.003 129.167 117.953 1.00 39.25 C
ATOM 16 N7 G B2028 32.216 128.639 117.055 1.00 39.16 N
ATOM 17 C5 G B2028 32.633 129.204 115.858 1.00 37.93 C
ATOM 18 C6 G B2028 32.169 129.003 114.539 1.00 36.56 C
ATOM 19 O6 G B2028 31.285 128.246 114.141 1.00 37.18 O
ATOM 20 N1 G B2028 32.860 129.788 113.630 1.00 36.64 N
ATOM 21 C2 G B2028 33.876 130.647 113.943 1.00 36.89 C
ATOM 22 N2 G B2028 34.422 131.318 112.922 1.00 36.51 N
ATOM 23 N3 G B2028 34.328 130.835 115.164 1.00 38.14 N
ATOM 24 C4 G B2028 33.667 130.084 116.067 1.00 38.23 C
ATOM 25 P A B2029 32.974 134.637 119.964 1.00 37.60 P
ATOM 26 OP1 A B2029 33.441 135.912 120.551 1.00 37.61 O
ATOM 27 OP2 A B2029 31.693 134.039 120.417 1.00 39.49 O
ATOM 28 O5' A B2029 32.904 134.797 118.381 1.00 38.27 O
TER

Atoms:
OP1: (24.437,128.604,108.917)
OP2: (25.725,128.989,111.104)
C3': (28.291,127.185,107.266)
C1': (30.219,128.297,107.913)
C5': (26.940,129.380,107.485)
O6: (34.909,130.958,110.449)
O4': (29.349,129.301,107.457)
C8: (31.078,129.070,110.191)
C2: (34.064,129.951,107.151)
C6: (34.234,130.466,109.540)
C5: (32.961,129.866,109.616)
C4: (32.389,129.388,108.463)
P: (25.483,129.333,109.670)
C4': (28.150,128.672,106.934)
C2': (29.296,127.196,108.409)
O2': (30.015,125.983,108.490)
N1: (34.721,130.465,108.238)
N2: (34.694,130.028,105.968)
N3: (32.877,129.396,107.212)
N7: (32.124,129.658,110.702)
N9: (31.179,128.886,108.833)
O5': (26.868,129.197,108.898)
O3': (28.979,126.569,106.191)
OP1: (32.430,129.679,123.743)
OP2: (31.207,128.393,121.879)
C3': (34.050,132.278,119.643)
C1': (34.984,130.759,118.110)
C5': (34.317,130.676,121.657)
O6: (31.285,128.246,114.141)
O4': (35.137,130.228,119.415)
C8: (33.003,129.167,117.953)
C2: (33.876,130.647,113.943)
C6: (32.169,129.003,114.539)
C5: (32.633,129.204,115.858)
C4: (33.667,130.084,116.067)
P: (32.456,128.972,122.434)
C4': (34.904,131.274,120.395)
C2': (34.684,132.247,118.260)
O2': (35.912,132.939,118.197)
N1: (32.860,129.788,113.630)
N2: (34.422,131.318,112.922)
N3: (34.328,130.835,115.164)
N7: (32.216,128.639,117.055)
N9: (33.921,130.036,117.417)
O5': (33.081,129.980,121.370)
O3': (34.143,133.569,120.216)
Image (generated by PyMOL):
PyMOL image
show in jmol