Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2DU3:D8:D12
Extra
PDB:
ATOM 1 O3' U A 7 20.999 54.726 -44.724 1.00167.63 O
ATOM 2 P G A 8 21.864 54.554 -43.381 1.00168.71 P
ATOM 3 OP1 G A 8 22.253 55.919 -42.939 1.00168.37 O
ATOM 4 OP2 G A 8 22.915 53.533 -43.630 1.00170.35 O
ATOM 5 O5' G A 8 20.826 53.961 -42.323 1.00164.72 O
ATOM 6 C5' G A 8 21.054 52.694 -41.702 1.00160.75 C
ATOM 7 C4' G A 8 19.985 51.711 -42.121 1.00155.71 C
ATOM 8 O4' G A 8 19.863 51.770 -43.555 1.00151.72 O
ATOM 9 C3' G A 8 20.267 50.244 -41.812 1.00156.79 C
ATOM 10 O3' G A 8 19.681 49.814 -40.577 1.00163.34 O
ATOM 11 C2' G A 8 19.503 49.493 -42.910 1.00152.55 C
ATOM 12 O2' G A 8 18.211 49.096 -42.499 1.00156.48 O
ATOM 13 C1' G A 8 19.365 50.541 -44.018 1.00145.56 C
ATOM 14 N9 G A 8 19.954 50.240 -45.316 1.00135.90 N
ATOM 15 C8 G A 8 21.076 50.799 -45.882 1.00126.97 C
ATOM 16 N7 G A 8 21.304 50.369 -47.094 1.00125.54 N
ATOM 17 C5 G A 8 20.279 49.461 -47.335 1.00128.02 C
ATOM 18 C6 G A 8 19.990 48.677 -48.485 1.00122.97 C
ATOM 19 O6 G A 8 20.598 48.632 -49.560 1.00131.38 O
ATOM 20 N1 G A 8 18.860 47.888 -48.297 1.00115.77 N
ATOM 21 C2 G A 8 18.102 47.854 -47.154 1.00114.76 C
ATOM 22 N2 G A 8 17.053 47.021 -47.163 1.00106.88 N
ATOM 23 N3 G A 8 18.354 48.582 -46.081 1.00125.17 N
ATOM 24 C4 G A 8 19.450 49.358 -46.241 1.00132.92 C
ATOM 25 P G A 9 19.718 50.754 -39.267 1.00166.38 P
ATOM 26 OP1 G A 9 19.013 49.982 -38.209 1.00163.20 O
ATOM 27 OP2 G A 9 19.245 52.120 -39.602 1.00164.53 O
ATOM 28 O5' G A 9 21.257 50.831 -38.863 1.00172.21 O
TER
ATOM 1 O3' A B 11 32.022 50.924 -46.854 1.00167.33 O
ATOM 2 P G B 12 31.791 52.252 -47.730 1.00174.41 P
ATOM 3 OP1 G B 12 33.125 52.787 -48.102 1.00175.08 O
ATOM 4 OP2 G B 12 30.828 53.125 -47.007 1.00171.67 O
ATOM 5 O5' G B 12 31.098 51.709 -49.059 1.00176.61 O
ATOM 6 C5' G B 12 31.729 50.707 -49.855 1.00175.93 C
ATOM 7 C4' G B 12 30.741 50.115 -50.834 1.00177.01 C
ATOM 8 O4' G B 12 29.674 49.455 -50.103 1.00176.68 O
ATOM 9 C3' G B 12 30.039 51.118 -51.736 1.00177.01 C
ATOM 10 O3' G B 12 30.841 51.388 -52.886 1.00178.15 O
ATOM 11 C2' G B 12 28.735 50.398 -52.066 1.00175.51 C
ATOM 12 O2' G B 12 28.879 49.423 -53.079 1.00173.69 O
ATOM 13 C1' G B 12 28.431 49.704 -50.736 1.00175.78 C
ATOM 14 N9 G B 12 27.620 50.505 -49.824 1.00178.89 N
ATOM 15 C8 G B 12 28.078 51.367 -48.855 1.00179.69 C
ATOM 16 N7 G B 12 27.118 51.940 -48.180 1.00179.54 N
ATOM 17 C5 G B 12 25.955 51.430 -48.739 1.00179.75 C
ATOM 18 C6 G B 12 24.597 51.684 -48.421 1.00178.79 C
ATOM 19 O6 G B 12 24.136 52.438 -47.552 1.00174.37 O
ATOM 20 N1 G B 12 23.737 50.954 -49.236 1.00179.05 N
ATOM 21 C2 G B 12 24.132 50.090 -50.231 1.00177.14 C
ATOM 22 N2 G B 12 23.150 49.476 -50.907 1.00174.57 N
ATOM 23 N3 G B 12 25.395 49.845 -50.538 1.00178.73 N
ATOM 24 C4 G B 12 26.247 50.544 -49.757 1.00180.32 C
ATOM 25 P A B 13 30.299 52.380 -54.030 1.00176.15 P
ATOM 26 OP1 A B 13 31.462 52.771 -54.866 1.00172.26 O
ATOM 27 OP2 A B 13 29.465 53.433 -53.394 1.00173.70 O
ATOM 28 O5' A B 13 29.357 51.445 -54.909 1.00174.54 O
TER
ATOM 2 P G A 8 21.864 54.554 -43.381 1.00168.71 P
ATOM 3 OP1 G A 8 22.253 55.919 -42.939 1.00168.37 O
ATOM 4 OP2 G A 8 22.915 53.533 -43.630 1.00170.35 O
ATOM 5 O5' G A 8 20.826 53.961 -42.323 1.00164.72 O
ATOM 6 C5' G A 8 21.054 52.694 -41.702 1.00160.75 C
ATOM 7 C4' G A 8 19.985 51.711 -42.121 1.00155.71 C
ATOM 8 O4' G A 8 19.863 51.770 -43.555 1.00151.72 O
ATOM 9 C3' G A 8 20.267 50.244 -41.812 1.00156.79 C
ATOM 10 O3' G A 8 19.681 49.814 -40.577 1.00163.34 O
ATOM 11 C2' G A 8 19.503 49.493 -42.910 1.00152.55 C
ATOM 12 O2' G A 8 18.211 49.096 -42.499 1.00156.48 O
ATOM 13 C1' G A 8 19.365 50.541 -44.018 1.00145.56 C
ATOM 14 N9 G A 8 19.954 50.240 -45.316 1.00135.90 N
ATOM 15 C8 G A 8 21.076 50.799 -45.882 1.00126.97 C
ATOM 16 N7 G A 8 21.304 50.369 -47.094 1.00125.54 N
ATOM 17 C5 G A 8 20.279 49.461 -47.335 1.00128.02 C
ATOM 18 C6 G A 8 19.990 48.677 -48.485 1.00122.97 C
ATOM 19 O6 G A 8 20.598 48.632 -49.560 1.00131.38 O
ATOM 20 N1 G A 8 18.860 47.888 -48.297 1.00115.77 N
ATOM 21 C2 G A 8 18.102 47.854 -47.154 1.00114.76 C
ATOM 22 N2 G A 8 17.053 47.021 -47.163 1.00106.88 N
ATOM 23 N3 G A 8 18.354 48.582 -46.081 1.00125.17 N
ATOM 24 C4 G A 8 19.450 49.358 -46.241 1.00132.92 C
ATOM 25 P G A 9 19.718 50.754 -39.267 1.00166.38 P
ATOM 26 OP1 G A 9 19.013 49.982 -38.209 1.00163.20 O
ATOM 27 OP2 G A 9 19.245 52.120 -39.602 1.00164.53 O
ATOM 28 O5' G A 9 21.257 50.831 -38.863 1.00172.21 O
TER
ATOM 1 O3' A B 11 32.022 50.924 -46.854 1.00167.33 O
ATOM 2 P G B 12 31.791 52.252 -47.730 1.00174.41 P
ATOM 3 OP1 G B 12 33.125 52.787 -48.102 1.00175.08 O
ATOM 4 OP2 G B 12 30.828 53.125 -47.007 1.00171.67 O
ATOM 5 O5' G B 12 31.098 51.709 -49.059 1.00176.61 O
ATOM 6 C5' G B 12 31.729 50.707 -49.855 1.00175.93 C
ATOM 7 C4' G B 12 30.741 50.115 -50.834 1.00177.01 C
ATOM 8 O4' G B 12 29.674 49.455 -50.103 1.00176.68 O
ATOM 9 C3' G B 12 30.039 51.118 -51.736 1.00177.01 C
ATOM 10 O3' G B 12 30.841 51.388 -52.886 1.00178.15 O
ATOM 11 C2' G B 12 28.735 50.398 -52.066 1.00175.51 C
ATOM 12 O2' G B 12 28.879 49.423 -53.079 1.00173.69 O
ATOM 13 C1' G B 12 28.431 49.704 -50.736 1.00175.78 C
ATOM 14 N9 G B 12 27.620 50.505 -49.824 1.00178.89 N
ATOM 15 C8 G B 12 28.078 51.367 -48.855 1.00179.69 C
ATOM 16 N7 G B 12 27.118 51.940 -48.180 1.00179.54 N
ATOM 17 C5 G B 12 25.955 51.430 -48.739 1.00179.75 C
ATOM 18 C6 G B 12 24.597 51.684 -48.421 1.00178.79 C
ATOM 19 O6 G B 12 24.136 52.438 -47.552 1.00174.37 O
ATOM 20 N1 G B 12 23.737 50.954 -49.236 1.00179.05 N
ATOM 21 C2 G B 12 24.132 50.090 -50.231 1.00177.14 C
ATOM 22 N2 G B 12 23.150 49.476 -50.907 1.00174.57 N
ATOM 23 N3 G B 12 25.395 49.845 -50.538 1.00178.73 N
ATOM 24 C4 G B 12 26.247 50.544 -49.757 1.00180.32 C
ATOM 25 P A B 13 30.299 52.380 -54.030 1.00176.15 P
ATOM 26 OP1 A B 13 31.462 52.771 -54.866 1.00172.26 O
ATOM 27 OP2 A B 13 29.465 53.433 -53.394 1.00173.70 O
ATOM 28 O5' A B 13 29.357 51.445 -54.909 1.00174.54 O
TER
Atoms:
OP1: (22.253,55.919,-42.939)
OP2: (22.915,53.533,-43.630)
C3': (20.267,50.244,-41.812)
C1': (19.365,50.541,-44.018)
C5': (21.054,52.694,-41.702)
O6: (20.598,48.632,-49.560)
O4': (19.863,51.770,-43.555)
C8: (21.076,50.799,-45.882)
C2: (18.102,47.854,-47.154)
C6: (19.990,48.677,-48.485)
C5: (20.279,49.461,-47.335)
C4: (19.450,49.358,-46.241)
P: (21.864,54.554,-43.381)
C4': (19.985,51.711,-42.121)
C2': (19.503,49.493,-42.910)
O2': (18.211,49.096,-42.499)
N1: (18.860,47.888,-48.297)
N2: (17.053,47.021,-47.163)
N3: (18.354,48.582,-46.081)
N7: (21.304,50.369,-47.094)
N9: (19.954,50.240,-45.316)
O5': (20.826,53.961,-42.323)
O3': (19.681,49.814,-40.577)
OP2: (22.915,53.533,-43.630)
C3': (20.267,50.244,-41.812)
C1': (19.365,50.541,-44.018)
C5': (21.054,52.694,-41.702)
O6: (20.598,48.632,-49.560)
O4': (19.863,51.770,-43.555)
C8: (21.076,50.799,-45.882)
C2: (18.102,47.854,-47.154)
C6: (19.990,48.677,-48.485)
C5: (20.279,49.461,-47.335)
C4: (19.450,49.358,-46.241)
P: (21.864,54.554,-43.381)
C4': (19.985,51.711,-42.121)
C2': (19.503,49.493,-42.910)
O2': (18.211,49.096,-42.499)
N1: (18.860,47.888,-48.297)
N2: (17.053,47.021,-47.163)
N3: (18.354,48.582,-46.081)
N7: (21.304,50.369,-47.094)
N9: (19.954,50.240,-45.316)
O5': (20.826,53.961,-42.323)
O3': (19.681,49.814,-40.577)
OP1: (33.125,52.787,-48.102)
OP2: (30.828,53.125,-47.007)
C3': (30.039,51.118,-51.736)
C1': (28.431,49.704,-50.736)
C5': (31.729,50.707,-49.855)
O6: (24.136,52.438,-47.552)
O4': (29.674,49.455,-50.103)
C8: (28.078,51.367,-48.855)
C2: (24.132,50.090,-50.231)
C6: (24.597,51.684,-48.421)
C5: (25.955,51.430,-48.739)
C4: (26.247,50.544,-49.757)
P: (31.791,52.252,-47.730)
C4': (30.741,50.115,-50.834)
C2': (28.735,50.398,-52.066)
O2': (28.879,49.423,-53.079)
N1: (23.737,50.954,-49.236)
N2: (23.150,49.476,-50.907)
N3: (25.395,49.845,-50.538)
N7: (27.118,51.940,-48.180)
N9: (27.620,50.505,-49.824)
O5': (31.098,51.709,-49.059)
O3': (30.841,51.388,-52.886)
OP2: (30.828,53.125,-47.007)
C3': (30.039,51.118,-51.736)
C1': (28.431,49.704,-50.736)
C5': (31.729,50.707,-49.855)
O6: (24.136,52.438,-47.552)
O4': (29.674,49.455,-50.103)
C8: (28.078,51.367,-48.855)
C2: (24.132,50.090,-50.231)
C6: (24.597,51.684,-48.421)
C5: (25.955,51.430,-48.739)
C4: (26.247,50.544,-49.757)
P: (31.791,52.252,-47.730)
C4': (30.741,50.115,-50.834)
C2': (28.735,50.398,-52.066)
O2': (28.879,49.423,-53.079)
N1: (23.737,50.954,-49.236)
N2: (23.150,49.476,-50.907)
N3: (25.395,49.845,-50.538)
N7: (27.118,51.940,-48.180)
N9: (27.620,50.505,-49.824)
O5': (31.098,51.709,-49.059)
O3': (30.841,51.388,-52.886)
Image (generated by PyMOL):