ClaRNA

Doublet info:

Details

Nucleotide types: GG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2J00:A282:A295

Extra

PDB:
ATOM 1 O3' C A 281 -3.052 55.622 90.669 1.00 17.01 O
ATOM 2 P G A 282 -4.159 55.180 89.602 1.00 22.84 P
ATOM 3 OP1 G A 282 -3.732 55.692 88.270 1.00 21.25 O
ATOM 4 OP2 G A 282 -5.485 55.568 90.155 1.00 21.25 O
ATOM 5 O5' G A 282 -4.070 53.588 89.599 1.00 32.75 O
ATOM 6 C5' G A 282 -2.830 52.928 89.252 1.00 31.40 C
ATOM 7 C4' G A 282 -3.003 51.426 89.207 1.00 30.02 C
ATOM 8 O4' G A 282 -3.203 50.897 90.539 1.00 29.58 O
ATOM 9 C3' G A 282 -4.185 50.903 88.412 1.00 30.00 C
ATOM 10 O3' G A 282 -3.896 50.844 87.030 1.00 31.02 O
ATOM 11 C2' G A 282 -4.385 49.521 89.011 1.00 29.29 C
ATOM 12 O2' G A 282 -3.436 48.599 88.510 1.00 29.57 O
ATOM 13 C1' G A 282 -4.072 49.777 90.483 1.00 29.40 C
ATOM 14 N9 G A 282 -5.289 50.099 91.219 1.00 17.88 N
ATOM 15 C8 G A 282 -5.833 51.346 91.394 1.00 18.79 C
ATOM 16 N7 G A 282 -6.962 51.324 92.044 1.00 18.78 N
ATOM 17 C5 G A 282 -7.168 49.985 92.328 1.00 17.11 C
ATOM 18 C6 G A 282 -8.232 49.352 93.005 1.00 18.39 C
ATOM 19 O6 G A 282 -9.243 49.862 93.486 1.00 20.08 O
ATOM 20 N1 G A 282 -8.048 47.980 93.083 1.00 16.16 N
ATOM 21 C2 G A 282 -6.991 47.303 92.552 1.00 15.85 C
ATOM 22 N2 G A 282 -7.021 45.974 92.695 1.00 15.85 N
ATOM 23 N3 G A 282 -5.984 47.884 91.916 1.00 16.46 N
ATOM 24 C4 G A 282 -6.139 49.218 91.841 1.00 16.91 C
ATOM 25 P G A 283 -5.045 51.206 85.975 1.00 33.65 P
ATOM 26 OP1 G A 283 -4.423 51.158 84.618 1.00 34.46 O
ATOM 27 OP2 G A 283 -5.711 52.448 86.432 1.00 34.53 O
ATOM 28 O5' G A 283 -6.083 50.018 86.137 1.00 4.99 O
TER

ATOM 1 O3' U B 294 -15.039 59.391 96.106 1.00 41.91 O
ATOM 2 P G B 295 -13.998 59.226 97.314 1.00 46.11 P
ATOM 3 OP1 G B 295 -14.793 58.972 98.549 1.00 50.57 O
ATOM 4 OP2 G B 295 -13.032 60.355 97.266 1.00 49.34 O
ATOM 5 O5' G B 295 -13.189 57.899 96.969 1.00 10.80 O
ATOM 6 C5' G B 295 -13.844 56.613 96.978 1.00 12.53 C
ATOM 7 C4' G B 295 -12.848 55.510 96.711 1.00 14.29 C
ATOM 8 O4' G B 295 -12.244 55.741 95.411 1.00 13.86 O
ATOM 9 C3' G B 295 -11.705 55.350 97.714 1.00 15.74 C
ATOM 10 O3' G B 295 -11.421 53.976 97.947 1.00 20.28 O
ATOM 11 C2' G B 295 -10.510 55.956 96.989 1.00 14.03 C
ATOM 12 O2' G B 295 -9.314 55.281 97.320 1.00 12.79 O
ATOM 13 C1' G B 295 -10.844 55.690 95.524 1.00 12.67 C
ATOM 14 N9 G B 295 -10.281 56.683 94.623 1.00 42.42 N
ATOM 15 C8 G B 295 -10.644 58.000 94.511 1.00 42.26 C
ATOM 16 N7 G B 295 -9.941 58.651 93.626 1.00 42.71 N
ATOM 17 C5 G B 295 -9.066 57.703 93.120 1.00 41.12 C
ATOM 18 C6 G B 295 -8.056 57.820 92.129 1.00 39.72 C
ATOM 19 O6 G B 295 -7.716 58.820 91.483 1.00 42.45 O
ATOM 20 N1 G B 295 -7.412 56.609 91.914 1.00 38.20 N
ATOM 21 C2 G B 295 -7.698 55.437 92.570 1.00 40.02 C
ATOM 22 N2 G B 295 -6.964 54.376 92.219 1.00 40.15 N
ATOM 23 N3 G B 295 -8.632 55.316 93.499 1.00 41.43 N
ATOM 24 C4 G B 295 -9.271 56.481 93.721 1.00 41.88 C
ATOM 25 P G B 296 -11.829 53.293 99.342 1.00 49.11 P
ATOM 26 OP1 G B 296 -11.752 54.312 100.413 1.00 47.71 O
ATOM 27 OP2 G B 296 -11.042 52.036 99.468 1.00 49.84 O
ATOM 28 O5' G B 296 -13.363 52.911 99.138 1.00 52.33 O
TER

Atoms:
OP1: (-3.732,55.692,88.270)
OP2: (-5.485,55.568,90.155)
C3': (-4.185,50.903,88.412)
C1': (-4.072,49.777,90.483)
C5': (-2.830,52.928,89.252)
O6: (-9.243,49.862,93.486)
O4': (-3.203,50.897,90.539)
C8: (-5.833,51.346,91.394)
C2: (-6.991,47.303,92.552)
C6: (-8.232,49.352,93.005)
C5: (-7.168,49.985,92.328)
C4: (-6.139,49.218,91.841)
P: (-4.159,55.180,89.602)
C4': (-3.003,51.426,89.207)
C2': (-4.385,49.521,89.011)
O2': (-3.436,48.599,88.510)
N1: (-8.048,47.980,93.083)
N2: (-7.021,45.974,92.695)
N3: (-5.984,47.884,91.916)
N7: (-6.962,51.324,92.044)
N9: (-5.289,50.099,91.219)
O5': (-4.070,53.588,89.599)
O3': (-3.896,50.844,87.030)
OP1: (-14.793,58.972,98.549)
OP2: (-13.032,60.355,97.266)
C3': (-11.705,55.350,97.714)
C1': (-10.844,55.690,95.524)
C5': (-13.844,56.613,96.978)
O6: (-7.716,58.820,91.483)
O4': (-12.244,55.741,95.411)
C8: (-10.644,58.000,94.511)
C2: (-7.698,55.437,92.570)
C6: (-8.056,57.820,92.129)
C5: (-9.066,57.703,93.120)
C4: (-9.271,56.481,93.721)
P: (-13.998,59.226,97.314)
C4': (-12.848,55.510,96.711)
C2': (-10.510,55.956,96.989)
O2': (-9.314,55.281,97.320)
N1: (-7.412,56.609,91.914)
N2: (-6.964,54.376,92.219)
N3: (-8.632,55.316,93.499)
N7: (-9.941,58.651,93.626)
N9: (-10.281,56.683,94.623)
O5': (-13.189,57.899,96.969)
O3': (-11.421,53.976,97.947)
Image (generated by PyMOL):
PyMOL image
show in jmol