Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3AKZ:E20:E44
Extra
PDB:
ATOM 1 O3' A A 19 -22.909 31.094 -0.232 1.00 32.39 O
ATOM 2 P G A 20 -22.754 30.720 -1.788 1.00 34.55 P
ATOM 3 OP1 G A 20 -23.426 29.417 -2.021 1.00 31.72 O
ATOM 4 OP2 G A 20 -21.323 30.882 -2.151 1.00 37.02 O
ATOM 5 O5' G A 20 -23.591 31.849 -2.536 1.00 33.36 O
ATOM 6 C5' G A 20 -25.011 31.854 -2.478 1.00 33.45 C
ATOM 7 C4' G A 20 -25.530 33.270 -2.435 1.00 34.57 C
ATOM 8 O4' G A 20 -25.011 33.936 -1.251 1.00 33.31 O
ATOM 9 C3' G A 20 -25.089 34.182 -3.567 1.00 35.76 C
ATOM 10 O3' G A 20 -25.870 33.997 -4.740 1.00 39.05 O
ATOM 11 C2' G A 20 -25.315 35.557 -2.955 1.00 34.94 C
ATOM 12 O2' G A 20 -26.674 35.947 -2.961 1.00 36.62 O
ATOM 13 C1' G A 20 -24.848 35.320 -1.519 1.00 32.39 C
ATOM 14 N9 G A 20 -23.439 35.661 -1.363 1.00 30.43 N
ATOM 15 C8 G A 20 -22.376 34.798 -1.248 1.00 29.97 C
ATOM 16 N7 G A 20 -21.228 35.412 -1.147 1.00 30.30 N
ATOM 17 C5 G A 20 -21.555 36.761 -1.191 1.00 28.84 C
ATOM 18 C6 G A 20 -20.727 37.913 -1.124 1.00 26.76 C
ATOM 19 O6 G A 20 -19.497 37.974 -1.010 1.00 25.92 O
ATOM 20 N1 G A 20 -21.475 39.084 -1.205 1.00 25.36 N
ATOM 21 C2 G A 20 -22.841 39.142 -1.333 1.00 25.54 C
ATOM 22 N2 G A 20 -23.379 40.368 -1.395 1.00 24.52 N
ATOM 23 N3 G A 20 -23.621 38.079 -1.396 1.00 27.38 N
ATOM 24 C4 G A 20 -22.917 36.930 -1.320 1.00 29.21 C
ATOM 25 P G A 21 -25.240 34.358 -6.174 1.00 43.82 P
ATOM 26 OP1 G A 21 -26.324 34.225 -7.181 1.00 44.28 O
ATOM 27 OP2 G A 21 -23.980 33.591 -6.345 1.00 45.67 O
ATOM 28 O5' G A 21 -24.867 35.902 -6.051 1.00 45.58 O
TER
ATOM 1 O3' G B 43 -11.643 28.866 -5.245 1.00 21.47 O
ATOM 2 P G B 44 -12.162 28.255 -3.855 1.00 21.54 P
ATOM 3 OP1 G B 44 -11.135 27.288 -3.387 1.00 23.37 O
ATOM 4 OP2 G B 44 -13.564 27.805 -4.037 1.00 23.59 O
ATOM 5 O5' G B 44 -12.165 29.498 -2.859 1.00 20.93 O
ATOM 6 C5' G B 44 -11.008 30.311 -2.707 1.00 17.99 C
ATOM 7 C4' G B 44 -11.255 31.377 -1.670 1.00 18.90 C
ATOM 8 O4' G B 44 -12.368 32.205 -2.095 1.00 17.07 O
ATOM 9 C3' G B 44 -11.685 30.875 -0.303 1.00 19.90 C
ATOM 10 O3' G B 44 -10.553 30.511 0.475 1.00 24.17 O
ATOM 11 C2' G B 44 -12.386 32.095 0.281 1.00 19.40 C
ATOM 12 O2' G B 44 -11.480 33.039 0.815 1.00 20.87 O
ATOM 13 C1' G B 44 -13.066 32.681 -0.958 1.00 17.44 C
ATOM 14 N9 G B 44 -14.472 32.315 -1.093 1.00 15.83 N
ATOM 15 C8 G B 44 -14.999 31.048 -1.159 1.00 14.41 C
ATOM 16 N7 G B 44 -16.300 31.040 -1.267 1.00 13.66 N
ATOM 17 C5 G B 44 -16.653 32.383 -1.276 1.00 12.82 C
ATOM 18 C6 G B 44 -17.929 32.998 -1.368 1.00 11.90 C
ATOM 19 O6 G B 44 -19.038 32.461 -1.460 1.00 13.88 O
ATOM 20 N1 G B 44 -17.832 34.384 -1.341 1.00 10.59 N
ATOM 21 C2 G B 44 -16.660 35.092 -1.236 1.00 12.22 C
ATOM 22 N2 G B 44 -16.776 36.429 -1.224 1.00 8.47 N
ATOM 23 N3 G B 44 -15.464 34.532 -1.148 1.00 12.84 N
ATOM 24 C4 G B 44 -15.536 33.183 -1.172 1.00 14.34 C
ATOM 25 P U B 45 -10.742 29.562 1.755 1.00 23.49 P
ATOM 26 OP1 U B 45 -9.407 29.363 2.372 1.00 25.85 O
ATOM 27 OP2 U B 45 -11.534 28.384 1.318 1.00 23.70 O
ATOM 28 O5' U B 45 -11.640 30.427 2.746 1.00 26.75 O
TER
ATOM 2 P G A 20 -22.754 30.720 -1.788 1.00 34.55 P
ATOM 3 OP1 G A 20 -23.426 29.417 -2.021 1.00 31.72 O
ATOM 4 OP2 G A 20 -21.323 30.882 -2.151 1.00 37.02 O
ATOM 5 O5' G A 20 -23.591 31.849 -2.536 1.00 33.36 O
ATOM 6 C5' G A 20 -25.011 31.854 -2.478 1.00 33.45 C
ATOM 7 C4' G A 20 -25.530 33.270 -2.435 1.00 34.57 C
ATOM 8 O4' G A 20 -25.011 33.936 -1.251 1.00 33.31 O
ATOM 9 C3' G A 20 -25.089 34.182 -3.567 1.00 35.76 C
ATOM 10 O3' G A 20 -25.870 33.997 -4.740 1.00 39.05 O
ATOM 11 C2' G A 20 -25.315 35.557 -2.955 1.00 34.94 C
ATOM 12 O2' G A 20 -26.674 35.947 -2.961 1.00 36.62 O
ATOM 13 C1' G A 20 -24.848 35.320 -1.519 1.00 32.39 C
ATOM 14 N9 G A 20 -23.439 35.661 -1.363 1.00 30.43 N
ATOM 15 C8 G A 20 -22.376 34.798 -1.248 1.00 29.97 C
ATOM 16 N7 G A 20 -21.228 35.412 -1.147 1.00 30.30 N
ATOM 17 C5 G A 20 -21.555 36.761 -1.191 1.00 28.84 C
ATOM 18 C6 G A 20 -20.727 37.913 -1.124 1.00 26.76 C
ATOM 19 O6 G A 20 -19.497 37.974 -1.010 1.00 25.92 O
ATOM 20 N1 G A 20 -21.475 39.084 -1.205 1.00 25.36 N
ATOM 21 C2 G A 20 -22.841 39.142 -1.333 1.00 25.54 C
ATOM 22 N2 G A 20 -23.379 40.368 -1.395 1.00 24.52 N
ATOM 23 N3 G A 20 -23.621 38.079 -1.396 1.00 27.38 N
ATOM 24 C4 G A 20 -22.917 36.930 -1.320 1.00 29.21 C
ATOM 25 P G A 21 -25.240 34.358 -6.174 1.00 43.82 P
ATOM 26 OP1 G A 21 -26.324 34.225 -7.181 1.00 44.28 O
ATOM 27 OP2 G A 21 -23.980 33.591 -6.345 1.00 45.67 O
ATOM 28 O5' G A 21 -24.867 35.902 -6.051 1.00 45.58 O
TER
ATOM 1 O3' G B 43 -11.643 28.866 -5.245 1.00 21.47 O
ATOM 2 P G B 44 -12.162 28.255 -3.855 1.00 21.54 P
ATOM 3 OP1 G B 44 -11.135 27.288 -3.387 1.00 23.37 O
ATOM 4 OP2 G B 44 -13.564 27.805 -4.037 1.00 23.59 O
ATOM 5 O5' G B 44 -12.165 29.498 -2.859 1.00 20.93 O
ATOM 6 C5' G B 44 -11.008 30.311 -2.707 1.00 17.99 C
ATOM 7 C4' G B 44 -11.255 31.377 -1.670 1.00 18.90 C
ATOM 8 O4' G B 44 -12.368 32.205 -2.095 1.00 17.07 O
ATOM 9 C3' G B 44 -11.685 30.875 -0.303 1.00 19.90 C
ATOM 10 O3' G B 44 -10.553 30.511 0.475 1.00 24.17 O
ATOM 11 C2' G B 44 -12.386 32.095 0.281 1.00 19.40 C
ATOM 12 O2' G B 44 -11.480 33.039 0.815 1.00 20.87 O
ATOM 13 C1' G B 44 -13.066 32.681 -0.958 1.00 17.44 C
ATOM 14 N9 G B 44 -14.472 32.315 -1.093 1.00 15.83 N
ATOM 15 C8 G B 44 -14.999 31.048 -1.159 1.00 14.41 C
ATOM 16 N7 G B 44 -16.300 31.040 -1.267 1.00 13.66 N
ATOM 17 C5 G B 44 -16.653 32.383 -1.276 1.00 12.82 C
ATOM 18 C6 G B 44 -17.929 32.998 -1.368 1.00 11.90 C
ATOM 19 O6 G B 44 -19.038 32.461 -1.460 1.00 13.88 O
ATOM 20 N1 G B 44 -17.832 34.384 -1.341 1.00 10.59 N
ATOM 21 C2 G B 44 -16.660 35.092 -1.236 1.00 12.22 C
ATOM 22 N2 G B 44 -16.776 36.429 -1.224 1.00 8.47 N
ATOM 23 N3 G B 44 -15.464 34.532 -1.148 1.00 12.84 N
ATOM 24 C4 G B 44 -15.536 33.183 -1.172 1.00 14.34 C
ATOM 25 P U B 45 -10.742 29.562 1.755 1.00 23.49 P
ATOM 26 OP1 U B 45 -9.407 29.363 2.372 1.00 25.85 O
ATOM 27 OP2 U B 45 -11.534 28.384 1.318 1.00 23.70 O
ATOM 28 O5' U B 45 -11.640 30.427 2.746 1.00 26.75 O
TER
Atoms:
OP1: (-23.426,29.417,-2.021)
OP2: (-21.323,30.882,-2.151)
C3': (-25.089,34.182,-3.567)
C1': (-24.848,35.320,-1.519)
C5': (-25.011,31.854,-2.478)
O6: (-19.497,37.974,-1.010)
O4': (-25.011,33.936,-1.251)
C8: (-22.376,34.798,-1.248)
C2: (-22.841,39.142,-1.333)
C6: (-20.727,37.913,-1.124)
C5: (-21.555,36.761,-1.191)
C4: (-22.917,36.930,-1.320)
P: (-22.754,30.720,-1.788)
C4': (-25.530,33.270,-2.435)
C2': (-25.315,35.557,-2.955)
O2': (-26.674,35.947,-2.961)
N1: (-21.475,39.084,-1.205)
N2: (-23.379,40.368,-1.395)
N3: (-23.621,38.079,-1.396)
N7: (-21.228,35.412,-1.147)
N9: (-23.439,35.661,-1.363)
O5': (-23.591,31.849,-2.536)
O3': (-25.870,33.997,-4.740)
OP2: (-21.323,30.882,-2.151)
C3': (-25.089,34.182,-3.567)
C1': (-24.848,35.320,-1.519)
C5': (-25.011,31.854,-2.478)
O6: (-19.497,37.974,-1.010)
O4': (-25.011,33.936,-1.251)
C8: (-22.376,34.798,-1.248)
C2: (-22.841,39.142,-1.333)
C6: (-20.727,37.913,-1.124)
C5: (-21.555,36.761,-1.191)
C4: (-22.917,36.930,-1.320)
P: (-22.754,30.720,-1.788)
C4': (-25.530,33.270,-2.435)
C2': (-25.315,35.557,-2.955)
O2': (-26.674,35.947,-2.961)
N1: (-21.475,39.084,-1.205)
N2: (-23.379,40.368,-1.395)
N3: (-23.621,38.079,-1.396)
N7: (-21.228,35.412,-1.147)
N9: (-23.439,35.661,-1.363)
O5': (-23.591,31.849,-2.536)
O3': (-25.870,33.997,-4.740)
OP1: (-11.135,27.288,-3.387)
OP2: (-13.564,27.805,-4.037)
C3': (-11.685,30.875,-0.303)
C1': (-13.066,32.681,-0.958)
C5': (-11.008,30.311,-2.707)
O6: (-19.038,32.461,-1.460)
O4': (-12.368,32.205,-2.095)
C8: (-14.999,31.048,-1.159)
C2: (-16.660,35.092,-1.236)
C6: (-17.929,32.998,-1.368)
C5: (-16.653,32.383,-1.276)
C4: (-15.536,33.183,-1.172)
P: (-12.162,28.255,-3.855)
C4': (-11.255,31.377,-1.670)
C2': (-12.386,32.095,0.281)
O2': (-11.480,33.039,0.815)
N1: (-17.832,34.384,-1.341)
N2: (-16.776,36.429,-1.224)
N3: (-15.464,34.532,-1.148)
N7: (-16.300,31.040,-1.267)
N9: (-14.472,32.315,-1.093)
O5': (-12.165,29.498,-2.859)
O3': (-10.553,30.511,0.475)
OP2: (-13.564,27.805,-4.037)
C3': (-11.685,30.875,-0.303)
C1': (-13.066,32.681,-0.958)
C5': (-11.008,30.311,-2.707)
O6: (-19.038,32.461,-1.460)
O4': (-12.368,32.205,-2.095)
C8: (-14.999,31.048,-1.159)
C2: (-16.660,35.092,-1.236)
C6: (-17.929,32.998,-1.368)
C5: (-16.653,32.383,-1.276)
C4: (-15.536,33.183,-1.172)
P: (-12.162,28.255,-3.855)
C4': (-11.255,31.377,-1.670)
C2': (-12.386,32.095,0.281)
O2': (-11.480,33.039,0.815)
N1: (-17.832,34.384,-1.341)
N2: (-16.776,36.429,-1.224)
N3: (-15.464,34.532,-1.148)
N7: (-16.300,31.040,-1.267)
N9: (-14.472,32.315,-1.093)
O5': (-12.165,29.498,-2.859)
O3': (-10.553,30.511,0.475)
Image (generated by PyMOL):