Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3E5E:A30:A35
Extra
PDB:
ATOM 1 O3' U A 29 -2.762 18.390 -25.343 1.00 80.58 O
ATOM 2 P G A 30 -1.927 17.130 -25.893 1.00 77.28 P
ATOM 3 OP1 G A 30 -1.098 17.556 -27.050 1.00 77.19 O
ATOM 4 OP2 G A 30 -2.860 15.993 -26.054 1.00 77.11 O
ATOM 5 O5' G A 30 -0.982 16.793 -24.650 1.00 73.11 O
ATOM 6 C5' G A 30 0.272 17.437 -24.516 1.00 67.19 C
ATOM 7 C4' G A 30 0.716 17.405 -23.070 1.00 62.89 C
ATOM 8 O4' G A 30 -0.160 16.542 -22.298 1.00 58.40 O
ATOM 9 C3' G A 30 2.130 16.876 -22.849 1.00 62.39 C
ATOM 10 O3' G A 30 2.887 17.843 -22.119 1.00 67.24 O
ATOM 11 C2' G A 30 1.900 15.600 -22.038 1.00 58.45 C
ATOM 12 O2' G A 30 2.935 15.321 -21.118 1.00 59.28 O
ATOM 13 C1' G A 30 0.640 15.990 -21.285 1.00 53.29 C
ATOM 14 N9 G A 30 -0.048 14.881 -20.637 1.00 44.71 N
ATOM 15 C8 G A 30 -0.880 13.944 -21.214 1.00 41.77 C
ATOM 16 N7 G A 30 -1.335 13.070 -20.354 1.00 38.48 N
ATOM 17 C5 G A 30 -0.769 13.453 -19.147 1.00 36.70 C
ATOM 18 C6 G A 30 -0.905 12.890 -17.862 1.00 35.59 C
ATOM 19 O6 G A 30 -1.573 11.897 -17.553 1.00 36.67 O
ATOM 20 N1 G A 30 -0.187 13.581 -16.884 1.00 33.34 N
ATOM 21 C2 G A 30 0.587 14.681 -17.152 1.00 33.29 C
ATOM 22 N2 G A 30 1.228 15.205 -16.106 1.00 31.38 N
ATOM 23 N3 G A 30 0.730 15.223 -18.358 1.00 34.79 N
ATOM 24 C4 G A 30 0.022 14.563 -19.301 1.00 38.43 C
ATOM 25 P C A 31 3.874 18.874 -22.853 1.00 71.27 P
ATOM 26 OP1 C A 31 4.564 19.641 -21.785 1.00 70.84 O
ATOM 27 OP2 C A 31 3.088 19.596 -23.892 1.00 70.95 O
ATOM 28 O5' C A 31 4.957 17.911 -23.554 1.00 72.99 O
TER
ATOM 1 O3' U B 34 -5.588 3.350 -25.531 1.00 65.58 O
ATOM 2 P G B 35 -6.941 4.187 -25.773 1.00 65.14 P
ATOM 3 OP1 G B 35 -8.071 3.229 -25.911 1.00 65.27 O
ATOM 4 OP2 G B 35 -6.678 5.183 -26.841 1.00 64.29 O
ATOM 5 O5' G B 35 -7.102 4.986 -24.394 1.00 61.75 O
ATOM 6 C5' G B 35 -7.502 4.334 -23.190 1.00 57.26 C
ATOM 7 C4' G B 35 -7.456 5.339 -22.054 1.00 54.15 C
ATOM 8 O4' G B 35 -6.190 6.077 -22.052 1.00 52.90 O
ATOM 9 C3' G B 35 -8.557 6.395 -22.134 1.00 52.18 C
ATOM 10 O3' G B 35 -8.944 6.740 -20.823 1.00 51.20 O
ATOM 11 C2' G B 35 -7.815 7.550 -22.788 1.00 51.42 C
ATOM 12 O2' G B 35 -8.426 8.806 -22.592 1.00 52.85 O
ATOM 13 C1' G B 35 -6.513 7.454 -21.996 1.00 50.23 C
ATOM 14 N9 G B 35 -5.495 8.364 -22.510 1.00 46.40 N
ATOM 15 C8 G B 35 -5.167 8.588 -23.824 1.00 45.27 C
ATOM 16 N7 G B 35 -4.239 9.501 -23.970 1.00 44.65 N
ATOM 17 C5 G B 35 -3.944 9.913 -22.674 1.00 43.69 C
ATOM 18 C6 G B 35 -3.018 10.876 -22.206 1.00 43.07 C
ATOM 19 O6 G B 35 -2.252 11.582 -22.883 1.00 44.60 O
ATOM 20 N1 G B 35 -3.028 11.002 -20.818 1.00 41.36 N
ATOM 21 C2 G B 35 -3.839 10.273 -19.991 1.00 42.24 C
ATOM 22 N2 G B 35 -3.724 10.517 -18.677 1.00 41.78 N
ATOM 23 N3 G B 35 -4.709 9.362 -20.419 1.00 43.17 N
ATOM 24 C4 G B 35 -4.716 9.230 -21.767 1.00 44.31 C
ATOM 25 P U B 36 -10.400 6.372 -20.312 1.00 50.71 P
ATOM 26 OP1 U B 36 -10.495 4.905 -20.097 1.00 50.87 O
ATOM 27 OP2 U B 36 -11.350 7.081 -21.208 1.00 50.53 O
ATOM 28 O5' U B 36 -10.428 7.098 -18.892 1.00 48.28 O
TER
ATOM 2 P G A 30 -1.927 17.130 -25.893 1.00 77.28 P
ATOM 3 OP1 G A 30 -1.098 17.556 -27.050 1.00 77.19 O
ATOM 4 OP2 G A 30 -2.860 15.993 -26.054 1.00 77.11 O
ATOM 5 O5' G A 30 -0.982 16.793 -24.650 1.00 73.11 O
ATOM 6 C5' G A 30 0.272 17.437 -24.516 1.00 67.19 C
ATOM 7 C4' G A 30 0.716 17.405 -23.070 1.00 62.89 C
ATOM 8 O4' G A 30 -0.160 16.542 -22.298 1.00 58.40 O
ATOM 9 C3' G A 30 2.130 16.876 -22.849 1.00 62.39 C
ATOM 10 O3' G A 30 2.887 17.843 -22.119 1.00 67.24 O
ATOM 11 C2' G A 30 1.900 15.600 -22.038 1.00 58.45 C
ATOM 12 O2' G A 30 2.935 15.321 -21.118 1.00 59.28 O
ATOM 13 C1' G A 30 0.640 15.990 -21.285 1.00 53.29 C
ATOM 14 N9 G A 30 -0.048 14.881 -20.637 1.00 44.71 N
ATOM 15 C8 G A 30 -0.880 13.944 -21.214 1.00 41.77 C
ATOM 16 N7 G A 30 -1.335 13.070 -20.354 1.00 38.48 N
ATOM 17 C5 G A 30 -0.769 13.453 -19.147 1.00 36.70 C
ATOM 18 C6 G A 30 -0.905 12.890 -17.862 1.00 35.59 C
ATOM 19 O6 G A 30 -1.573 11.897 -17.553 1.00 36.67 O
ATOM 20 N1 G A 30 -0.187 13.581 -16.884 1.00 33.34 N
ATOM 21 C2 G A 30 0.587 14.681 -17.152 1.00 33.29 C
ATOM 22 N2 G A 30 1.228 15.205 -16.106 1.00 31.38 N
ATOM 23 N3 G A 30 0.730 15.223 -18.358 1.00 34.79 N
ATOM 24 C4 G A 30 0.022 14.563 -19.301 1.00 38.43 C
ATOM 25 P C A 31 3.874 18.874 -22.853 1.00 71.27 P
ATOM 26 OP1 C A 31 4.564 19.641 -21.785 1.00 70.84 O
ATOM 27 OP2 C A 31 3.088 19.596 -23.892 1.00 70.95 O
ATOM 28 O5' C A 31 4.957 17.911 -23.554 1.00 72.99 O
TER
ATOM 1 O3' U B 34 -5.588 3.350 -25.531 1.00 65.58 O
ATOM 2 P G B 35 -6.941 4.187 -25.773 1.00 65.14 P
ATOM 3 OP1 G B 35 -8.071 3.229 -25.911 1.00 65.27 O
ATOM 4 OP2 G B 35 -6.678 5.183 -26.841 1.00 64.29 O
ATOM 5 O5' G B 35 -7.102 4.986 -24.394 1.00 61.75 O
ATOM 6 C5' G B 35 -7.502 4.334 -23.190 1.00 57.26 C
ATOM 7 C4' G B 35 -7.456 5.339 -22.054 1.00 54.15 C
ATOM 8 O4' G B 35 -6.190 6.077 -22.052 1.00 52.90 O
ATOM 9 C3' G B 35 -8.557 6.395 -22.134 1.00 52.18 C
ATOM 10 O3' G B 35 -8.944 6.740 -20.823 1.00 51.20 O
ATOM 11 C2' G B 35 -7.815 7.550 -22.788 1.00 51.42 C
ATOM 12 O2' G B 35 -8.426 8.806 -22.592 1.00 52.85 O
ATOM 13 C1' G B 35 -6.513 7.454 -21.996 1.00 50.23 C
ATOM 14 N9 G B 35 -5.495 8.364 -22.510 1.00 46.40 N
ATOM 15 C8 G B 35 -5.167 8.588 -23.824 1.00 45.27 C
ATOM 16 N7 G B 35 -4.239 9.501 -23.970 1.00 44.65 N
ATOM 17 C5 G B 35 -3.944 9.913 -22.674 1.00 43.69 C
ATOM 18 C6 G B 35 -3.018 10.876 -22.206 1.00 43.07 C
ATOM 19 O6 G B 35 -2.252 11.582 -22.883 1.00 44.60 O
ATOM 20 N1 G B 35 -3.028 11.002 -20.818 1.00 41.36 N
ATOM 21 C2 G B 35 -3.839 10.273 -19.991 1.00 42.24 C
ATOM 22 N2 G B 35 -3.724 10.517 -18.677 1.00 41.78 N
ATOM 23 N3 G B 35 -4.709 9.362 -20.419 1.00 43.17 N
ATOM 24 C4 G B 35 -4.716 9.230 -21.767 1.00 44.31 C
ATOM 25 P U B 36 -10.400 6.372 -20.312 1.00 50.71 P
ATOM 26 OP1 U B 36 -10.495 4.905 -20.097 1.00 50.87 O
ATOM 27 OP2 U B 36 -11.350 7.081 -21.208 1.00 50.53 O
ATOM 28 O5' U B 36 -10.428 7.098 -18.892 1.00 48.28 O
TER
Atoms:
OP1: (-1.098,17.556,-27.050)
OP2: (-2.860,15.993,-26.054)
C3': (2.130,16.876,-22.849)
C1': (0.640,15.990,-21.285)
C5': (0.272,17.437,-24.516)
O6: (-1.573,11.897,-17.553)
O4': (-0.160,16.542,-22.298)
C8: (-0.880,13.944,-21.214)
C2: (0.587,14.681,-17.152)
C6: (-0.905,12.890,-17.862)
C5: (-0.769,13.453,-19.147)
C4: (0.022,14.563,-19.301)
P: (-1.927,17.130,-25.893)
C4': (0.716,17.405,-23.070)
C2': (1.900,15.600,-22.038)
O2': (2.935,15.321,-21.118)
N1: (-0.187,13.581,-16.884)
N2: (1.228,15.205,-16.106)
N3: (0.730,15.223,-18.358)
N7: (-1.335,13.070,-20.354)
N9: (-0.048,14.881,-20.637)
O5': (-0.982,16.793,-24.650)
O3': (2.887,17.843,-22.119)
OP2: (-2.860,15.993,-26.054)
C3': (2.130,16.876,-22.849)
C1': (0.640,15.990,-21.285)
C5': (0.272,17.437,-24.516)
O6: (-1.573,11.897,-17.553)
O4': (-0.160,16.542,-22.298)
C8: (-0.880,13.944,-21.214)
C2: (0.587,14.681,-17.152)
C6: (-0.905,12.890,-17.862)
C5: (-0.769,13.453,-19.147)
C4: (0.022,14.563,-19.301)
P: (-1.927,17.130,-25.893)
C4': (0.716,17.405,-23.070)
C2': (1.900,15.600,-22.038)
O2': (2.935,15.321,-21.118)
N1: (-0.187,13.581,-16.884)
N2: (1.228,15.205,-16.106)
N3: (0.730,15.223,-18.358)
N7: (-1.335,13.070,-20.354)
N9: (-0.048,14.881,-20.637)
O5': (-0.982,16.793,-24.650)
O3': (2.887,17.843,-22.119)
OP1: (-8.071,3.229,-25.911)
OP2: (-6.678,5.183,-26.841)
C3': (-8.557,6.395,-22.134)
C1': (-6.513,7.454,-21.996)
C5': (-7.502,4.334,-23.190)
O6: (-2.252,11.582,-22.883)
O4': (-6.190,6.077,-22.052)
C8: (-5.167,8.588,-23.824)
C2: (-3.839,10.273,-19.991)
C6: (-3.018,10.876,-22.206)
C5: (-3.944,9.913,-22.674)
C4: (-4.716,9.230,-21.767)
P: (-6.941,4.187,-25.773)
C4': (-7.456,5.339,-22.054)
C2': (-7.815,7.550,-22.788)
O2': (-8.426,8.806,-22.592)
N1: (-3.028,11.002,-20.818)
N2: (-3.724,10.517,-18.677)
N3: (-4.709,9.362,-20.419)
N7: (-4.239,9.501,-23.970)
N9: (-5.495,8.364,-22.510)
O5': (-7.102,4.986,-24.394)
O3': (-8.944,6.740,-20.823)
OP2: (-6.678,5.183,-26.841)
C3': (-8.557,6.395,-22.134)
C1': (-6.513,7.454,-21.996)
C5': (-7.502,4.334,-23.190)
O6: (-2.252,11.582,-22.883)
O4': (-6.190,6.077,-22.052)
C8: (-5.167,8.588,-23.824)
C2: (-3.839,10.273,-19.991)
C6: (-3.018,10.876,-22.206)
C5: (-3.944,9.913,-22.674)
C4: (-4.716,9.230,-21.767)
P: (-6.941,4.187,-25.773)
C4': (-7.456,5.339,-22.054)
C2': (-7.815,7.550,-22.788)
O2': (-8.426,8.806,-22.592)
N1: (-3.028,11.002,-20.818)
N2: (-3.724,10.517,-18.677)
N3: (-4.709,9.362,-20.419)
N7: (-4.239,9.501,-23.970)
N9: (-5.495,8.364,-22.510)
O5': (-7.102,4.986,-24.394)
O3': (-8.944,6.740,-20.823)
Image (generated by PyMOL):