Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3E5F:A30:A35
Extra
PDB:
ATOM 1 O3' U A 29 18.263 -2.834 -17.988 1.00 70.95 O
ATOM 2 P G A 30 17.091 -1.747 -17.847 1.00 60.71 P
ATOM 3 OP1 G A 30 17.579 -0.787 -16.819 1.00 59.92 O
ATOM 4 OP2 G A 30 15.785 -2.415 -17.653 1.00 57.86 O
ATOM 5 O5' G A 30 17.087 -1.020 -19.260 1.00 54.48 O
ATOM 6 C5' G A 30 17.724 0.238 -19.448 1.00 51.43 C
ATOM 7 C4' G A 30 17.420 0.756 -20.834 1.00 50.52 C
ATOM 8 O4' G A 30 16.479 -0.085 -21.513 1.00 48.30 O
ATOM 9 C3' G A 30 16.852 2.172 -20.905 1.00 51.53 C
ATOM 10 O3' G A 30 17.823 2.958 -21.579 1.00 54.69 O
ATOM 11 C2' G A 30 15.685 2.090 -21.897 1.00 49.09 C
ATOM 12 O2' G A 30 15.659 3.066 -22.917 1.00 50.09 O
ATOM 13 C1' G A 30 15.888 0.703 -22.499 1.00 44.80 C
ATOM 14 N9 G A 30 14.741 0.046 -23.101 1.00 37.15 N
ATOM 15 C8 G A 30 13.801 -0.748 -22.508 1.00 34.55 C
ATOM 16 N7 G A 30 12.889 -1.163 -23.346 1.00 33.13 N
ATOM 17 C5 G A 30 13.260 -0.607 -24.562 1.00 31.82 C
ATOM 18 C6 G A 30 12.654 -0.697 -25.836 1.00 32.85 C
ATOM 19 O6 G A 30 11.620 -1.301 -26.155 1.00 34.91 O
ATOM 20 N1 G A 30 13.367 0.013 -26.798 1.00 29.84 N
ATOM 21 C2 G A 30 14.507 0.723 -26.561 1.00 29.12 C
ATOM 22 N2 G A 30 15.056 1.331 -27.623 1.00 27.68 N
ATOM 23 N3 G A 30 15.073 0.829 -25.372 1.00 30.82 N
ATOM 24 C4 G A 30 14.401 0.137 -24.428 1.00 32.68 C
ATOM 25 P C A 31 18.723 3.995 -20.782 1.00 60.10 P
ATOM 26 OP1 C A 31 19.557 4.624 -21.847 1.00 60.70 O
ATOM 27 OP2 C A 31 19.377 3.266 -19.661 1.00 59.31 O
ATOM 28 O5' C A 31 17.670 5.062 -20.233 1.00 62.27 O
TER
ATOM 1 O3' U B 34 3.307 -5.672 -18.208 1.00 58.14 O
ATOM 2 P G B 35 4.243 -6.956 -18.018 1.00 58.77 P
ATOM 3 OP1 G B 35 3.387 -8.167 -17.898 1.00 57.08 O
ATOM 4 OP2 G B 35 5.196 -6.622 -16.937 1.00 57.26 O
ATOM 5 O5' G B 35 5.055 -7.050 -19.384 1.00 57.19 O
ATOM 6 C5' G B 35 4.425 -7.321 -20.647 1.00 54.91 C
ATOM 7 C4' G B 35 5.492 -7.330 -21.707 1.00 53.47 C
ATOM 8 O4' G B 35 6.195 -6.075 -21.663 1.00 53.37 O
ATOM 9 C3' G B 35 6.521 -8.431 -21.426 1.00 51.86 C
ATOM 10 O3' G B 35 6.914 -8.911 -22.720 1.00 49.81 O
ATOM 11 C2' G B 35 7.757 -7.682 -20.941 1.00 52.08 C
ATOM 12 O2' G B 35 9.011 -8.235 -21.254 1.00 53.16 O
ATOM 13 C1' G B 35 7.567 -6.351 -21.654 1.00 51.27 C
ATOM 14 N9 G B 35 8.315 -5.225 -21.145 1.00 46.20 N
ATOM 15 C8 G B 35 8.382 -4.779 -19.854 1.00 44.14 C
ATOM 16 N7 G B 35 9.186 -3.758 -19.717 1.00 44.21 N
ATOM 17 C5 G B 35 9.666 -3.521 -21.000 1.00 41.52 C
ATOM 18 C6 G B 35 10.569 -2.562 -21.465 1.00 40.59 C
ATOM 19 O6 G B 35 11.153 -1.702 -20.822 1.00 43.06 O
ATOM 20 N1 G B 35 10.785 -2.669 -22.831 1.00 39.84 N
ATOM 21 C2 G B 35 10.205 -3.593 -23.647 1.00 41.18 C
ATOM 22 N2 G B 35 10.550 -3.539 -24.937 1.00 40.23 N
ATOM 23 N3 G B 35 9.351 -4.505 -23.224 1.00 41.82 N
ATOM 24 C4 G B 35 9.131 -4.410 -21.892 1.00 43.00 C
ATOM 25 P U B 36 6.528 -10.371 -23.229 1.00 48.03 P
ATOM 26 OP1 U B 36 5.049 -10.452 -23.330 1.00 47.47 O
ATOM 27 OP2 U B 36 7.249 -11.322 -22.348 1.00 46.27 O
ATOM 28 O5' U B 36 7.183 -10.420 -24.696 1.00 43.19 O
TER
ATOM 2 P G A 30 17.091 -1.747 -17.847 1.00 60.71 P
ATOM 3 OP1 G A 30 17.579 -0.787 -16.819 1.00 59.92 O
ATOM 4 OP2 G A 30 15.785 -2.415 -17.653 1.00 57.86 O
ATOM 5 O5' G A 30 17.087 -1.020 -19.260 1.00 54.48 O
ATOM 6 C5' G A 30 17.724 0.238 -19.448 1.00 51.43 C
ATOM 7 C4' G A 30 17.420 0.756 -20.834 1.00 50.52 C
ATOM 8 O4' G A 30 16.479 -0.085 -21.513 1.00 48.30 O
ATOM 9 C3' G A 30 16.852 2.172 -20.905 1.00 51.53 C
ATOM 10 O3' G A 30 17.823 2.958 -21.579 1.00 54.69 O
ATOM 11 C2' G A 30 15.685 2.090 -21.897 1.00 49.09 C
ATOM 12 O2' G A 30 15.659 3.066 -22.917 1.00 50.09 O
ATOM 13 C1' G A 30 15.888 0.703 -22.499 1.00 44.80 C
ATOM 14 N9 G A 30 14.741 0.046 -23.101 1.00 37.15 N
ATOM 15 C8 G A 30 13.801 -0.748 -22.508 1.00 34.55 C
ATOM 16 N7 G A 30 12.889 -1.163 -23.346 1.00 33.13 N
ATOM 17 C5 G A 30 13.260 -0.607 -24.562 1.00 31.82 C
ATOM 18 C6 G A 30 12.654 -0.697 -25.836 1.00 32.85 C
ATOM 19 O6 G A 30 11.620 -1.301 -26.155 1.00 34.91 O
ATOM 20 N1 G A 30 13.367 0.013 -26.798 1.00 29.84 N
ATOM 21 C2 G A 30 14.507 0.723 -26.561 1.00 29.12 C
ATOM 22 N2 G A 30 15.056 1.331 -27.623 1.00 27.68 N
ATOM 23 N3 G A 30 15.073 0.829 -25.372 1.00 30.82 N
ATOM 24 C4 G A 30 14.401 0.137 -24.428 1.00 32.68 C
ATOM 25 P C A 31 18.723 3.995 -20.782 1.00 60.10 P
ATOM 26 OP1 C A 31 19.557 4.624 -21.847 1.00 60.70 O
ATOM 27 OP2 C A 31 19.377 3.266 -19.661 1.00 59.31 O
ATOM 28 O5' C A 31 17.670 5.062 -20.233 1.00 62.27 O
TER
ATOM 1 O3' U B 34 3.307 -5.672 -18.208 1.00 58.14 O
ATOM 2 P G B 35 4.243 -6.956 -18.018 1.00 58.77 P
ATOM 3 OP1 G B 35 3.387 -8.167 -17.898 1.00 57.08 O
ATOM 4 OP2 G B 35 5.196 -6.622 -16.937 1.00 57.26 O
ATOM 5 O5' G B 35 5.055 -7.050 -19.384 1.00 57.19 O
ATOM 6 C5' G B 35 4.425 -7.321 -20.647 1.00 54.91 C
ATOM 7 C4' G B 35 5.492 -7.330 -21.707 1.00 53.47 C
ATOM 8 O4' G B 35 6.195 -6.075 -21.663 1.00 53.37 O
ATOM 9 C3' G B 35 6.521 -8.431 -21.426 1.00 51.86 C
ATOM 10 O3' G B 35 6.914 -8.911 -22.720 1.00 49.81 O
ATOM 11 C2' G B 35 7.757 -7.682 -20.941 1.00 52.08 C
ATOM 12 O2' G B 35 9.011 -8.235 -21.254 1.00 53.16 O
ATOM 13 C1' G B 35 7.567 -6.351 -21.654 1.00 51.27 C
ATOM 14 N9 G B 35 8.315 -5.225 -21.145 1.00 46.20 N
ATOM 15 C8 G B 35 8.382 -4.779 -19.854 1.00 44.14 C
ATOM 16 N7 G B 35 9.186 -3.758 -19.717 1.00 44.21 N
ATOM 17 C5 G B 35 9.666 -3.521 -21.000 1.00 41.52 C
ATOM 18 C6 G B 35 10.569 -2.562 -21.465 1.00 40.59 C
ATOM 19 O6 G B 35 11.153 -1.702 -20.822 1.00 43.06 O
ATOM 20 N1 G B 35 10.785 -2.669 -22.831 1.00 39.84 N
ATOM 21 C2 G B 35 10.205 -3.593 -23.647 1.00 41.18 C
ATOM 22 N2 G B 35 10.550 -3.539 -24.937 1.00 40.23 N
ATOM 23 N3 G B 35 9.351 -4.505 -23.224 1.00 41.82 N
ATOM 24 C4 G B 35 9.131 -4.410 -21.892 1.00 43.00 C
ATOM 25 P U B 36 6.528 -10.371 -23.229 1.00 48.03 P
ATOM 26 OP1 U B 36 5.049 -10.452 -23.330 1.00 47.47 O
ATOM 27 OP2 U B 36 7.249 -11.322 -22.348 1.00 46.27 O
ATOM 28 O5' U B 36 7.183 -10.420 -24.696 1.00 43.19 O
TER
Atoms:
OP1: (17.579,-0.787,-16.819)
OP2: (15.785,-2.415,-17.653)
C3': (16.852,2.172,-20.905)
C1': (15.888,0.703,-22.499)
C5': (17.724,0.238,-19.448)
O6: (11.620,-1.301,-26.155)
O4': (16.479,-0.085,-21.513)
C8: (13.801,-0.748,-22.508)
C2: (14.507,0.723,-26.561)
C6: (12.654,-0.697,-25.836)
C5: (13.260,-0.607,-24.562)
C4: (14.401,0.137,-24.428)
P: (17.091,-1.747,-17.847)
C4': (17.420,0.756,-20.834)
C2': (15.685,2.090,-21.897)
O2': (15.659,3.066,-22.917)
N1: (13.367,0.013,-26.798)
N2: (15.056,1.331,-27.623)
N3: (15.073,0.829,-25.372)
N7: (12.889,-1.163,-23.346)
N9: (14.741,0.046,-23.101)
O5': (17.087,-1.020,-19.260)
O3': (17.823,2.958,-21.579)
OP2: (15.785,-2.415,-17.653)
C3': (16.852,2.172,-20.905)
C1': (15.888,0.703,-22.499)
C5': (17.724,0.238,-19.448)
O6: (11.620,-1.301,-26.155)
O4': (16.479,-0.085,-21.513)
C8: (13.801,-0.748,-22.508)
C2: (14.507,0.723,-26.561)
C6: (12.654,-0.697,-25.836)
C5: (13.260,-0.607,-24.562)
C4: (14.401,0.137,-24.428)
P: (17.091,-1.747,-17.847)
C4': (17.420,0.756,-20.834)
C2': (15.685,2.090,-21.897)
O2': (15.659,3.066,-22.917)
N1: (13.367,0.013,-26.798)
N2: (15.056,1.331,-27.623)
N3: (15.073,0.829,-25.372)
N7: (12.889,-1.163,-23.346)
N9: (14.741,0.046,-23.101)
O5': (17.087,-1.020,-19.260)
O3': (17.823,2.958,-21.579)
OP1: (3.387,-8.167,-17.898)
OP2: (5.196,-6.622,-16.937)
C3': (6.521,-8.431,-21.426)
C1': (7.567,-6.351,-21.654)
C5': (4.425,-7.321,-20.647)
O6: (11.153,-1.702,-20.822)
O4': (6.195,-6.075,-21.663)
C8: (8.382,-4.779,-19.854)
C2: (10.205,-3.593,-23.647)
C6: (10.569,-2.562,-21.465)
C5: (9.666,-3.521,-21.000)
C4: (9.131,-4.410,-21.892)
P: (4.243,-6.956,-18.018)
C4': (5.492,-7.330,-21.707)
C2': (7.757,-7.682,-20.941)
O2': (9.011,-8.235,-21.254)
N1: (10.785,-2.669,-22.831)
N2: (10.550,-3.539,-24.937)
N3: (9.351,-4.505,-23.224)
N7: (9.186,-3.758,-19.717)
N9: (8.315,-5.225,-21.145)
O5': (5.055,-7.050,-19.384)
O3': (6.914,-8.911,-22.720)
OP2: (5.196,-6.622,-16.937)
C3': (6.521,-8.431,-21.426)
C1': (7.567,-6.351,-21.654)
C5': (4.425,-7.321,-20.647)
O6: (11.153,-1.702,-20.822)
O4': (6.195,-6.075,-21.663)
C8: (8.382,-4.779,-19.854)
C2: (10.205,-3.593,-23.647)
C6: (10.569,-2.562,-21.465)
C5: (9.666,-3.521,-21.000)
C4: (9.131,-4.410,-21.892)
P: (4.243,-6.956,-18.018)
C4': (5.492,-7.330,-21.707)
C2': (7.757,-7.682,-20.941)
O2': (9.011,-8.235,-21.254)
N1: (10.785,-2.669,-22.831)
N2: (10.550,-3.539,-24.937)
N3: (9.351,-4.505,-23.224)
N7: (9.186,-3.758,-19.717)
N9: (8.315,-5.225,-21.145)
O5': (5.055,-7.050,-19.384)
O3': (6.914,-8.911,-22.720)
Image (generated by PyMOL):