ClaRNA

Doublet info:

Details

Nucleotide types: GG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3FOZ:D18:D42

Extra

PDB:
ATOM 1 O3' A A 17 2.104 68.180 20.946 1.00 36.25 O
ATOM 2 P G A 18 2.623 68.207 22.459 1.00 42.84 P
ATOM 3 OP1 G A 18 1.452 68.463 23.318 1.00 42.75 O
ATOM 4 OP2 G A 18 3.781 69.118 22.586 1.00 43.68 O
ATOM 5 O5' G A 18 3.200 66.724 22.634 1.00 44.51 O
ATOM 6 C5' G A 18 2.461 65.582 23.097 1.00 47.26 C
ATOM 7 C4' G A 18 0.943 65.726 23.125 1.00 44.95 C
ATOM 8 O4' G A 18 0.385 65.751 21.784 1.00 39.60 O
ATOM 9 C3' G A 18 0.261 64.560 23.812 1.00 44.34 C
ATOM 10 O3' G A 18 -1.032 64.930 24.312 1.00 42.52 O
ATOM 11 C2' G A 18 0.176 63.561 22.673 1.00 40.53 C
ATOM 12 O2' G A 18 -0.895 62.668 22.864 1.00 50.64 O
ATOM 13 C1' G A 18 -0.072 64.448 21.453 1.00 33.07 C
ATOM 14 N9 G A 18 0.599 63.943 20.255 1.00 18.81 N
ATOM 15 C8 G A 18 1.842 64.272 19.770 1.00 14.73 C
ATOM 16 N7 G A 18 2.165 63.648 18.670 1.00 11.55 N
ATOM 17 C5 G A 18 1.064 62.845 18.406 1.00 17.69 C
ATOM 18 C6 G A 18 0.826 61.927 17.350 1.00 20.60 C
ATOM 19 O6 G A 18 1.572 61.642 16.401 1.00 27.33 O
ATOM 20 N1 G A 18 -0.419 61.310 17.460 1.00 15.76 N
ATOM 21 C2 G A 18 -1.319 61.553 18.471 1.00 15.04 C
ATOM 22 N2 G A 18 -2.474 60.874 18.432 1.00 11.85 N
ATOM 23 N3 G A 18 -1.104 62.406 19.468 1.00 15.02 N
ATOM 24 C4 G A 18 0.098 63.016 19.373 1.00 15.26 C
ATOM 25 P A A 19 -1.638 64.288 25.653 1.00 39.32 P
ATOM 26 OP1 A A 19 -2.526 65.328 26.225 1.00 40.73 O
ATOM 27 OP2 A A 19 -0.524 63.737 26.463 1.00 37.95 O
ATOM 28 O5' A A 19 -2.533 63.058 25.133 1.00 37.45 O
TER

ATOM 1 O3' U B 41 12.735 59.583 19.595 1.00 27.16 O
ATOM 2 P G B 42 13.476 60.689 18.691 1.00 30.43 P
ATOM 3 OP1 G B 42 14.797 60.122 18.332 1.00 28.51 O
ATOM 4 OP2 G B 42 13.391 61.996 19.388 1.00 28.82 O
ATOM 5 O5' G B 42 12.575 60.789 17.367 1.00 24.06 O
ATOM 6 C5' G B 42 12.180 62.055 16.831 1.00 19.40 C
ATOM 7 C4' G B 42 11.351 61.868 15.569 1.00 16.58 C
ATOM 8 O4' G B 42 9.950 62.121 15.854 1.00 12.48 O
ATOM 9 C3' G B 42 11.666 62.820 14.426 1.00 15.75 C
ATOM 10 O3' G B 42 11.219 62.263 13.179 1.00 15.62 O
ATOM 11 C2' G B 42 10.865 64.040 14.869 1.00 14.08 C
ATOM 12 O2' G B 42 10.659 64.971 13.827 1.00 14.30 O
ATOM 13 C1' G B 42 9.561 63.373 15.318 1.00 12.51 C
ATOM 14 N9 G B 42 8.770 64.043 16.354 1.00 9.20 N
ATOM 15 C8 G B 42 9.162 65.034 17.225 1.00 5.55 C
ATOM 16 N7 G B 42 8.219 65.413 18.041 1.00 3.00 N
ATOM 17 C5 G B 42 7.130 64.622 17.699 1.00 5.29 C
ATOM 18 C6 G B 42 5.817 64.577 18.238 1.00 2.40 C
ATOM 19 O6 G B 42 5.345 65.251 19.161 1.00 2.43 O
ATOM 20 N1 G B 42 5.013 63.632 17.603 1.00 2.00 N
ATOM 21 C2 G B 42 5.427 62.825 16.570 1.00 2.00 C
ATOM 22 N2 G B 42 4.516 61.974 16.084 1.00 2.00 N
ATOM 23 N3 G B 42 6.653 62.855 16.055 1.00 3.97 N
ATOM 24 C4 G B 42 7.453 63.770 16.666 1.00 6.95 C
ATOM 25 P U B 43 12.195 61.895 11.953 1.00 14.24 P
ATOM 26 OP1 U B 43 11.628 60.700 11.284 1.00 5.69 O
ATOM 27 OP2 U B 43 13.602 61.865 12.421 1.00 14.41 O
ATOM 28 O5' U B 43 11.998 63.172 10.997 1.00 16.45 O
TER

Atoms:
OP1: (1.452,68.463,23.318)
OP2: (3.781,69.118,22.586)
C3': (0.261,64.560,23.812)
C1': (-0.072,64.448,21.453)
C5': (2.461,65.582,23.097)
O6: (1.572,61.642,16.401)
O4': (0.385,65.751,21.784)
C8: (1.842,64.272,19.770)
C2: (-1.319,61.553,18.471)
C6: (0.826,61.927,17.350)
C5: (1.064,62.845,18.406)
C4: (0.098,63.016,19.373)
P: (2.623,68.207,22.459)
C4': (0.943,65.726,23.125)
C2': (0.176,63.561,22.673)
O2': (-0.895,62.668,22.864)
N1: (-0.419,61.310,17.460)
N2: (-2.474,60.874,18.432)
N3: (-1.104,62.406,19.468)
N7: (2.165,63.648,18.670)
N9: (0.599,63.943,20.255)
O5': (3.200,66.724,22.634)
O3': (-1.032,64.930,24.312)
OP1: (14.797,60.122,18.332)
OP2: (13.391,61.996,19.388)
C3': (11.666,62.820,14.426)
C1': (9.561,63.373,15.318)
C5': (12.180,62.055,16.831)
O6: (5.345,65.251,19.161)
O4': (9.950,62.121,15.854)
C8: (9.162,65.034,17.225)
C2: (5.427,62.825,16.570)
C6: (5.817,64.577,18.238)
C5: (7.130,64.622,17.699)
C4: (7.453,63.770,16.666)
P: (13.476,60.689,18.691)
C4': (11.351,61.868,15.569)
C2': (10.865,64.040,14.869)
O2': (10.659,64.971,13.827)
N1: (5.013,63.632,17.603)
N2: (4.516,61.974,16.084)
N3: (6.653,62.855,16.055)
N7: (8.219,65.413,18.041)
N9: (8.770,64.043,16.354)
O5': (12.575,60.789,17.367)
O3': (11.219,62.263,13.179)
Image (generated by PyMOL):
PyMOL image
show in jmol