Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3KFU:N19:N43
Extra
PDB:
ATOM 1 O3' A A 18 -13.797 -37.483 67.010 1.00120.11 O
ATOM 2 P G A 19 -13.914 -39.088 67.021 1.00217.85 P
ATOM 3 OP1 G A 19 -15.349 -39.422 66.857 1.00247.00 O
ATOM 4 OP2 G A 19 -13.203 -39.573 68.229 1.00213.94 O
ATOM 5 O5' G A 19 -13.108 -39.506 65.715 1.00194.58 O
ATOM 6 C5' G A 19 -12.045 -38.696 65.229 1.00185.77 C
ATOM 7 C4' G A 19 -11.574 -39.142 63.868 1.00131.03 C
ATOM 8 O4' G A 19 -10.874 -38.040 63.232 1.00103.28 O
ATOM 9 C3' G A 19 -10.598 -40.313 63.871 1.00104.42 C
ATOM 10 O3' G A 19 -10.746 -41.056 62.660 1.00118.67 O
ATOM 11 C2' G A 19 -9.248 -39.607 63.877 1.00 84.01 C
ATOM 12 O2' G A 19 -8.173 -40.382 63.393 1.00113.95 O
ATOM 13 C1' G A 19 -9.530 -38.402 62.984 1.00 82.55 C
ATOM 14 N9 G A 19 -8.688 -37.241 63.279 1.00 97.61 N
ATOM 15 C8 G A 19 -8.393 -36.748 64.526 1.00 88.44 C
ATOM 16 N7 G A 19 -7.608 -35.708 64.492 1.00101.09 N
ATOM 17 C5 G A 19 -7.370 -35.502 63.141 1.00 91.48 C
ATOM 18 C6 G A 19 -6.589 -34.516 62.489 1.00102.90 C
ATOM 19 O6 G A 19 -5.932 -33.599 62.996 1.00113.53 O
ATOM 20 N1 G A 19 -6.618 -34.672 61.106 1.00 79.55 N
ATOM 21 C2 G A 19 -7.310 -35.649 60.437 1.00 78.21 C
ATOM 22 N2 G A 19 -7.214 -35.632 59.100 1.00138.07 N
ATOM 23 N3 G A 19 -8.043 -36.574 61.033 1.00106.36 N
ATOM 24 C4 G A 19 -8.028 -36.442 62.377 1.00109.63 C
ATOM 25 P A A 20 -9.859 -42.372 62.395 1.00122.92 P
ATOM 26 OP1 A A 20 -10.765 -43.404 61.838 1.00145.53 O
ATOM 27 OP2 A A 20 -9.126 -42.670 63.651 1.00130.46 O
ATOM 28 O5' A A 20 -8.838 -41.888 61.274 1.00178.71 O
TER
ATOM 1 O3' G B 42 -1.443 -37.463 73.711 1.00137.88 O
ATOM 2 P G B 43 -2.604 -36.851 74.638 1.00 74.50 P
ATOM 3 OP1 G B 43 -1.982 -36.488 75.934 1.00127.76 O
ATOM 4 OP2 G B 43 -3.727 -37.821 74.631 1.00102.53 O
ATOM 5 O5' G B 43 -3.023 -35.535 73.854 1.00127.84 O
ATOM 6 C5' G B 43 -2.040 -34.601 73.428 1.00110.73 C
ATOM 7 C4' G B 43 -2.666 -33.382 72.801 1.00 82.93 C
ATOM 8 O4' G B 43 -3.473 -33.794 71.665 1.00 53.31 O
ATOM 9 C3' G B 43 -3.585 -32.575 73.716 1.00107.76 C
ATOM 10 O3' G B 43 -3.414 -31.184 73.454 1.00143.35 O
ATOM 11 C2' G B 43 -4.982 -33.016 73.282 1.00 98.94 C
ATOM 12 O2' G B 43 -5.997 -32.063 73.514 1.00164.05 O
ATOM 13 C1' G B 43 -4.781 -33.279 71.792 1.00 88.09 C
ATOM 14 N9 G B 43 -5.716 -34.258 71.228 1.00 83.32 N
ATOM 15 C8 G B 43 -6.517 -35.128 71.926 1.00113.32 C
ATOM 16 N7 G B 43 -7.255 -35.881 71.157 1.00 75.44 N
ATOM 17 C5 G B 43 -6.925 -35.483 69.870 1.00 90.38 C
ATOM 18 C6 G B 43 -7.404 -35.942 68.615 1.00100.58 C
ATOM 19 O6 G B 43 -8.242 -36.820 68.381 1.00129.07 O
ATOM 20 N1 G B 43 -6.803 -35.267 67.562 1.00 82.51 N
ATOM 21 C2 G B 43 -5.863 -34.278 67.695 1.00 89.01 C
ATOM 22 N2 G B 43 -5.401 -33.748 66.554 1.00 90.60 N
ATOM 23 N3 G B 43 -5.408 -33.839 68.855 1.00 90.41 N
ATOM 24 C4 G B 43 -5.979 -34.480 69.896 1.00 93.53 C
ATOM 25 P U B 44 -2.265 -30.357 74.218 1.00110.25 P
ATOM 26 OP1 U B 44 -1.303 -29.892 73.190 1.00151.10 O
ATOM 27 OP2 U B 44 -1.769 -31.217 75.320 1.00164.10 O
ATOM 28 O5' U B 44 -3.060 -29.116 74.816 1.00117.59 O
TER
ATOM 2 P G A 19 -13.914 -39.088 67.021 1.00217.85 P
ATOM 3 OP1 G A 19 -15.349 -39.422 66.857 1.00247.00 O
ATOM 4 OP2 G A 19 -13.203 -39.573 68.229 1.00213.94 O
ATOM 5 O5' G A 19 -13.108 -39.506 65.715 1.00194.58 O
ATOM 6 C5' G A 19 -12.045 -38.696 65.229 1.00185.77 C
ATOM 7 C4' G A 19 -11.574 -39.142 63.868 1.00131.03 C
ATOM 8 O4' G A 19 -10.874 -38.040 63.232 1.00103.28 O
ATOM 9 C3' G A 19 -10.598 -40.313 63.871 1.00104.42 C
ATOM 10 O3' G A 19 -10.746 -41.056 62.660 1.00118.67 O
ATOM 11 C2' G A 19 -9.248 -39.607 63.877 1.00 84.01 C
ATOM 12 O2' G A 19 -8.173 -40.382 63.393 1.00113.95 O
ATOM 13 C1' G A 19 -9.530 -38.402 62.984 1.00 82.55 C
ATOM 14 N9 G A 19 -8.688 -37.241 63.279 1.00 97.61 N
ATOM 15 C8 G A 19 -8.393 -36.748 64.526 1.00 88.44 C
ATOM 16 N7 G A 19 -7.608 -35.708 64.492 1.00101.09 N
ATOM 17 C5 G A 19 -7.370 -35.502 63.141 1.00 91.48 C
ATOM 18 C6 G A 19 -6.589 -34.516 62.489 1.00102.90 C
ATOM 19 O6 G A 19 -5.932 -33.599 62.996 1.00113.53 O
ATOM 20 N1 G A 19 -6.618 -34.672 61.106 1.00 79.55 N
ATOM 21 C2 G A 19 -7.310 -35.649 60.437 1.00 78.21 C
ATOM 22 N2 G A 19 -7.214 -35.632 59.100 1.00138.07 N
ATOM 23 N3 G A 19 -8.043 -36.574 61.033 1.00106.36 N
ATOM 24 C4 G A 19 -8.028 -36.442 62.377 1.00109.63 C
ATOM 25 P A A 20 -9.859 -42.372 62.395 1.00122.92 P
ATOM 26 OP1 A A 20 -10.765 -43.404 61.838 1.00145.53 O
ATOM 27 OP2 A A 20 -9.126 -42.670 63.651 1.00130.46 O
ATOM 28 O5' A A 20 -8.838 -41.888 61.274 1.00178.71 O
TER
ATOM 1 O3' G B 42 -1.443 -37.463 73.711 1.00137.88 O
ATOM 2 P G B 43 -2.604 -36.851 74.638 1.00 74.50 P
ATOM 3 OP1 G B 43 -1.982 -36.488 75.934 1.00127.76 O
ATOM 4 OP2 G B 43 -3.727 -37.821 74.631 1.00102.53 O
ATOM 5 O5' G B 43 -3.023 -35.535 73.854 1.00127.84 O
ATOM 6 C5' G B 43 -2.040 -34.601 73.428 1.00110.73 C
ATOM 7 C4' G B 43 -2.666 -33.382 72.801 1.00 82.93 C
ATOM 8 O4' G B 43 -3.473 -33.794 71.665 1.00 53.31 O
ATOM 9 C3' G B 43 -3.585 -32.575 73.716 1.00107.76 C
ATOM 10 O3' G B 43 -3.414 -31.184 73.454 1.00143.35 O
ATOM 11 C2' G B 43 -4.982 -33.016 73.282 1.00 98.94 C
ATOM 12 O2' G B 43 -5.997 -32.063 73.514 1.00164.05 O
ATOM 13 C1' G B 43 -4.781 -33.279 71.792 1.00 88.09 C
ATOM 14 N9 G B 43 -5.716 -34.258 71.228 1.00 83.32 N
ATOM 15 C8 G B 43 -6.517 -35.128 71.926 1.00113.32 C
ATOM 16 N7 G B 43 -7.255 -35.881 71.157 1.00 75.44 N
ATOM 17 C5 G B 43 -6.925 -35.483 69.870 1.00 90.38 C
ATOM 18 C6 G B 43 -7.404 -35.942 68.615 1.00100.58 C
ATOM 19 O6 G B 43 -8.242 -36.820 68.381 1.00129.07 O
ATOM 20 N1 G B 43 -6.803 -35.267 67.562 1.00 82.51 N
ATOM 21 C2 G B 43 -5.863 -34.278 67.695 1.00 89.01 C
ATOM 22 N2 G B 43 -5.401 -33.748 66.554 1.00 90.60 N
ATOM 23 N3 G B 43 -5.408 -33.839 68.855 1.00 90.41 N
ATOM 24 C4 G B 43 -5.979 -34.480 69.896 1.00 93.53 C
ATOM 25 P U B 44 -2.265 -30.357 74.218 1.00110.25 P
ATOM 26 OP1 U B 44 -1.303 -29.892 73.190 1.00151.10 O
ATOM 27 OP2 U B 44 -1.769 -31.217 75.320 1.00164.10 O
ATOM 28 O5' U B 44 -3.060 -29.116 74.816 1.00117.59 O
TER
Atoms:
OP1: (-15.349,-39.422,66.857)
OP2: (-13.203,-39.573,68.229)
C3': (-10.598,-40.313,63.871)
C1': (-9.530,-38.402,62.984)
C5': (-12.045,-38.696,65.229)
O6: (-5.932,-33.599,62.996)
O4': (-10.874,-38.040,63.232)
C8: (-8.393,-36.748,64.526)
C2: (-7.310,-35.649,60.437)
C6: (-6.589,-34.516,62.489)
C5: (-7.370,-35.502,63.141)
C4: (-8.028,-36.442,62.377)
P: (-13.914,-39.088,67.021)
C4': (-11.574,-39.142,63.868)
C2': (-9.248,-39.607,63.877)
O2': (-8.173,-40.382,63.393)
N1: (-6.618,-34.672,61.106)
N2: (-7.214,-35.632,59.100)
N3: (-8.043,-36.574,61.033)
N7: (-7.608,-35.708,64.492)
N9: (-8.688,-37.241,63.279)
O5': (-13.108,-39.506,65.715)
O3': (-10.746,-41.056,62.660)
OP2: (-13.203,-39.573,68.229)
C3': (-10.598,-40.313,63.871)
C1': (-9.530,-38.402,62.984)
C5': (-12.045,-38.696,65.229)
O6: (-5.932,-33.599,62.996)
O4': (-10.874,-38.040,63.232)
C8: (-8.393,-36.748,64.526)
C2: (-7.310,-35.649,60.437)
C6: (-6.589,-34.516,62.489)
C5: (-7.370,-35.502,63.141)
C4: (-8.028,-36.442,62.377)
P: (-13.914,-39.088,67.021)
C4': (-11.574,-39.142,63.868)
C2': (-9.248,-39.607,63.877)
O2': (-8.173,-40.382,63.393)
N1: (-6.618,-34.672,61.106)
N2: (-7.214,-35.632,59.100)
N3: (-8.043,-36.574,61.033)
N7: (-7.608,-35.708,64.492)
N9: (-8.688,-37.241,63.279)
O5': (-13.108,-39.506,65.715)
O3': (-10.746,-41.056,62.660)
OP1: (-1.982,-36.488,75.934)
OP2: (-3.727,-37.821,74.631)
C3': (-3.585,-32.575,73.716)
C1': (-4.781,-33.279,71.792)
C5': (-2.040,-34.601,73.428)
O6: (-8.242,-36.820,68.381)
O4': (-3.473,-33.794,71.665)
C8: (-6.517,-35.128,71.926)
C2: (-5.863,-34.278,67.695)
C6: (-7.404,-35.942,68.615)
C5: (-6.925,-35.483,69.870)
C4: (-5.979,-34.480,69.896)
P: (-2.604,-36.851,74.638)
C4': (-2.666,-33.382,72.801)
C2': (-4.982,-33.016,73.282)
O2': (-5.997,-32.063,73.514)
N1: (-6.803,-35.267,67.562)
N2: (-5.401,-33.748,66.554)
N3: (-5.408,-33.839,68.855)
N7: (-7.255,-35.881,71.157)
N9: (-5.716,-34.258,71.228)
O5': (-3.023,-35.535,73.854)
O3': (-3.414,-31.184,73.454)
OP2: (-3.727,-37.821,74.631)
C3': (-3.585,-32.575,73.716)
C1': (-4.781,-33.279,71.792)
C5': (-2.040,-34.601,73.428)
O6: (-8.242,-36.820,68.381)
O4': (-3.473,-33.794,71.665)
C8: (-6.517,-35.128,71.926)
C2: (-5.863,-34.278,67.695)
C6: (-7.404,-35.942,68.615)
C5: (-6.925,-35.483,69.870)
C4: (-5.979,-34.480,69.896)
P: (-2.604,-36.851,74.638)
C4': (-2.666,-33.382,72.801)
C2': (-4.982,-33.016,73.282)
O2': (-5.997,-32.063,73.514)
N1: (-6.803,-35.267,67.562)
N2: (-5.401,-33.748,66.554)
N3: (-5.408,-33.839,68.855)
N7: (-7.255,-35.881,71.157)
N9: (-5.716,-34.258,71.228)
O5': (-3.023,-35.535,73.854)
O3': (-3.414,-31.184,73.454)
Image (generated by PyMOL):