Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3Q3Z:A60:A55
Extra
PDB:
ATOM 1 O3' U A 59 -4.459 14.761 -20.247 1.00 56.65 O
ATOM 2 P G A 60 -3.938 15.589 -21.517 1.00 59.41 P
ATOM 3 OP1 G A 60 -5.067 15.738 -22.455 1.00 60.41 O
ATOM 4 OP2 G A 60 -2.676 14.974 -21.985 1.00 60.51 O
ATOM 5 O5' G A 60 -3.583 17.013 -20.893 1.00 55.89 O
ATOM 6 C5' G A 60 -4.620 17.918 -20.564 1.00 58.51 C
ATOM 7 C4' G A 60 -4.033 19.213 -20.045 1.00 54.83 C
ATOM 8 O4' G A 60 -3.213 18.961 -18.883 1.00 57.89 O
ATOM 9 C3' G A 60 -3.085 19.902 -21.004 1.00 54.67 C
ATOM 10 O3' G A 60 -3.812 20.622 -21.971 1.00 53.57 O
ATOM 11 C2' G A 60 -2.290 20.796 -20.060 1.00 59.95 C
ATOM 12 O2' G A 60 -2.957 21.990 -19.702 1.00 62.71 O
ATOM 13 C1' G A 60 -2.140 19.895 -18.844 1.00 55.43 C
ATOM 14 N9 G A 60 -0.879 19.162 -18.790 1.00 53.95 N
ATOM 15 C8 G A 60 -0.665 17.843 -19.126 1.00 52.96 C
ATOM 16 N7 G A 60 0.567 17.453 -18.960 1.00 50.29 N
ATOM 17 C5 G A 60 1.211 18.581 -18.475 1.00 52.14 C
ATOM 18 C6 G A 60 2.562 18.761 -18.105 1.00 51.62 C
ATOM 19 O6 G A 60 3.477 17.932 -18.137 1.00 54.47 O
ATOM 20 N1 G A 60 2.811 20.059 -17.666 1.00 58.71 N
ATOM 21 C2 G A 60 1.869 21.062 -17.592 1.00 56.52 C
ATOM 22 N2 G A 60 2.303 22.248 -17.141 1.00 58.21 N
ATOM 23 N3 G A 60 0.594 20.905 -17.932 1.00 54.23 N
ATOM 24 C4 G A 60 0.337 19.644 -18.365 1.00 54.17 C
ATOM 25 P C A 61 -3.206 20.859 -23.423 1.00 55.73 P
ATOM 26 OP1 C A 61 -4.194 21.659 -24.180 1.00 55.70 O
ATOM 27 OP2 C A 61 -2.748 19.560 -23.963 1.00 52.12 O
ATOM 28 O5' C A 61 -1.920 21.764 -23.108 1.00 56.84 O
TER
ATOM 1 O3' A B 54 2.553 7.837 -25.121 1.00 55.52 O
ATOM 2 P G B 55 2.519 6.874 -23.850 1.00 54.82 P
ATOM 3 OP1 G B 55 3.195 5.616 -24.233 1.00 60.35 O
ATOM 4 OP2 G B 55 1.142 6.842 -23.305 1.00 55.44 O
ATOM 5 O5' G B 55 3.430 7.640 -22.793 1.00 51.77 O
ATOM 6 C5' G B 55 4.833 7.639 -22.930 1.00 57.14 C
ATOM 7 C4' G B 55 5.443 8.651 -21.983 1.00 55.59 C
ATOM 8 O4' G B 55 4.868 9.956 -22.241 1.00 49.66 O
ATOM 9 C3' G B 55 5.153 8.381 -20.518 1.00 54.65 C
ATOM 10 O3' G B 55 6.083 7.442 -19.977 1.00 53.93 O
ATOM 11 C2' G B 55 5.273 9.772 -19.906 1.00 56.11 C
ATOM 12 O2' G B 55 6.600 10.115 -19.571 1.00 60.35 O
ATOM 13 C1' G B 55 4.757 10.676 -21.023 1.00 56.04 C
ATOM 14 N9 G B 55 3.374 11.127 -20.845 1.00 51.23 N
ATOM 15 C8 G B 55 2.221 10.450 -21.159 1.00 51.12 C
ATOM 16 N7 G B 55 1.135 11.120 -20.893 1.00 52.73 N
ATOM 17 C5 G B 55 1.593 12.320 -20.373 1.00 52.45 C
ATOM 18 C6 G B 55 0.876 13.451 -19.906 1.00 54.04 C
ATOM 19 O6 G B 55 -0.347 13.607 -19.868 1.00 51.73 O
ATOM 20 N1 G B 55 1.722 14.468 -19.451 1.00 54.24 N
ATOM 21 C2 G B 55 3.101 14.394 -19.451 1.00 52.27 C
ATOM 22 N2 G B 55 3.772 15.459 -18.980 1.00 46.81 N
ATOM 23 N3 G B 55 3.781 13.340 -19.896 1.00 53.43 N
ATOM 24 C4 G B 55 2.968 12.342 -20.338 1.00 52.29 C
ATOM 25 P U B 56 5.549 6.152 -19.196 1.00 59.35 P
ATOM 26 OP1 U B 56 6.682 5.504 -18.502 1.00 64.66 O
ATOM 27 OP2 U B 56 4.712 5.360 -20.134 1.00 54.14 O
ATOM 28 O5' U B 56 4.579 6.787 -18.093 1.00 59.78 O
TER
ATOM 2 P G A 60 -3.938 15.589 -21.517 1.00 59.41 P
ATOM 3 OP1 G A 60 -5.067 15.738 -22.455 1.00 60.41 O
ATOM 4 OP2 G A 60 -2.676 14.974 -21.985 1.00 60.51 O
ATOM 5 O5' G A 60 -3.583 17.013 -20.893 1.00 55.89 O
ATOM 6 C5' G A 60 -4.620 17.918 -20.564 1.00 58.51 C
ATOM 7 C4' G A 60 -4.033 19.213 -20.045 1.00 54.83 C
ATOM 8 O4' G A 60 -3.213 18.961 -18.883 1.00 57.89 O
ATOM 9 C3' G A 60 -3.085 19.902 -21.004 1.00 54.67 C
ATOM 10 O3' G A 60 -3.812 20.622 -21.971 1.00 53.57 O
ATOM 11 C2' G A 60 -2.290 20.796 -20.060 1.00 59.95 C
ATOM 12 O2' G A 60 -2.957 21.990 -19.702 1.00 62.71 O
ATOM 13 C1' G A 60 -2.140 19.895 -18.844 1.00 55.43 C
ATOM 14 N9 G A 60 -0.879 19.162 -18.790 1.00 53.95 N
ATOM 15 C8 G A 60 -0.665 17.843 -19.126 1.00 52.96 C
ATOM 16 N7 G A 60 0.567 17.453 -18.960 1.00 50.29 N
ATOM 17 C5 G A 60 1.211 18.581 -18.475 1.00 52.14 C
ATOM 18 C6 G A 60 2.562 18.761 -18.105 1.00 51.62 C
ATOM 19 O6 G A 60 3.477 17.932 -18.137 1.00 54.47 O
ATOM 20 N1 G A 60 2.811 20.059 -17.666 1.00 58.71 N
ATOM 21 C2 G A 60 1.869 21.062 -17.592 1.00 56.52 C
ATOM 22 N2 G A 60 2.303 22.248 -17.141 1.00 58.21 N
ATOM 23 N3 G A 60 0.594 20.905 -17.932 1.00 54.23 N
ATOM 24 C4 G A 60 0.337 19.644 -18.365 1.00 54.17 C
ATOM 25 P C A 61 -3.206 20.859 -23.423 1.00 55.73 P
ATOM 26 OP1 C A 61 -4.194 21.659 -24.180 1.00 55.70 O
ATOM 27 OP2 C A 61 -2.748 19.560 -23.963 1.00 52.12 O
ATOM 28 O5' C A 61 -1.920 21.764 -23.108 1.00 56.84 O
TER
ATOM 1 O3' A B 54 2.553 7.837 -25.121 1.00 55.52 O
ATOM 2 P G B 55 2.519 6.874 -23.850 1.00 54.82 P
ATOM 3 OP1 G B 55 3.195 5.616 -24.233 1.00 60.35 O
ATOM 4 OP2 G B 55 1.142 6.842 -23.305 1.00 55.44 O
ATOM 5 O5' G B 55 3.430 7.640 -22.793 1.00 51.77 O
ATOM 6 C5' G B 55 4.833 7.639 -22.930 1.00 57.14 C
ATOM 7 C4' G B 55 5.443 8.651 -21.983 1.00 55.59 C
ATOM 8 O4' G B 55 4.868 9.956 -22.241 1.00 49.66 O
ATOM 9 C3' G B 55 5.153 8.381 -20.518 1.00 54.65 C
ATOM 10 O3' G B 55 6.083 7.442 -19.977 1.00 53.93 O
ATOM 11 C2' G B 55 5.273 9.772 -19.906 1.00 56.11 C
ATOM 12 O2' G B 55 6.600 10.115 -19.571 1.00 60.35 O
ATOM 13 C1' G B 55 4.757 10.676 -21.023 1.00 56.04 C
ATOM 14 N9 G B 55 3.374 11.127 -20.845 1.00 51.23 N
ATOM 15 C8 G B 55 2.221 10.450 -21.159 1.00 51.12 C
ATOM 16 N7 G B 55 1.135 11.120 -20.893 1.00 52.73 N
ATOM 17 C5 G B 55 1.593 12.320 -20.373 1.00 52.45 C
ATOM 18 C6 G B 55 0.876 13.451 -19.906 1.00 54.04 C
ATOM 19 O6 G B 55 -0.347 13.607 -19.868 1.00 51.73 O
ATOM 20 N1 G B 55 1.722 14.468 -19.451 1.00 54.24 N
ATOM 21 C2 G B 55 3.101 14.394 -19.451 1.00 52.27 C
ATOM 22 N2 G B 55 3.772 15.459 -18.980 1.00 46.81 N
ATOM 23 N3 G B 55 3.781 13.340 -19.896 1.00 53.43 N
ATOM 24 C4 G B 55 2.968 12.342 -20.338 1.00 52.29 C
ATOM 25 P U B 56 5.549 6.152 -19.196 1.00 59.35 P
ATOM 26 OP1 U B 56 6.682 5.504 -18.502 1.00 64.66 O
ATOM 27 OP2 U B 56 4.712 5.360 -20.134 1.00 54.14 O
ATOM 28 O5' U B 56 4.579 6.787 -18.093 1.00 59.78 O
TER
Atoms:
OP1: (-5.067,15.738,-22.455)
OP2: (-2.676,14.974,-21.985)
C3': (-3.085,19.902,-21.004)
C1': (-2.140,19.895,-18.844)
C5': (-4.620,17.918,-20.564)
O6: (3.477,17.932,-18.137)
O4': (-3.213,18.961,-18.883)
C8: (-0.665,17.843,-19.126)
C2: (1.869,21.062,-17.592)
C6: (2.562,18.761,-18.105)
C5: (1.211,18.581,-18.475)
C4: (0.337,19.644,-18.365)
P: (-3.938,15.589,-21.517)
C4': (-4.033,19.213,-20.045)
C2': (-2.290,20.796,-20.060)
O2': (-2.957,21.990,-19.702)
N1: (2.811,20.059,-17.666)
N2: (2.303,22.248,-17.141)
N3: (0.594,20.905,-17.932)
N7: (0.567,17.453,-18.960)
N9: (-0.879,19.162,-18.790)
O5': (-3.583,17.013,-20.893)
O3': (-3.812,20.622,-21.971)
OP2: (-2.676,14.974,-21.985)
C3': (-3.085,19.902,-21.004)
C1': (-2.140,19.895,-18.844)
C5': (-4.620,17.918,-20.564)
O6: (3.477,17.932,-18.137)
O4': (-3.213,18.961,-18.883)
C8: (-0.665,17.843,-19.126)
C2: (1.869,21.062,-17.592)
C6: (2.562,18.761,-18.105)
C5: (1.211,18.581,-18.475)
C4: (0.337,19.644,-18.365)
P: (-3.938,15.589,-21.517)
C4': (-4.033,19.213,-20.045)
C2': (-2.290,20.796,-20.060)
O2': (-2.957,21.990,-19.702)
N1: (2.811,20.059,-17.666)
N2: (2.303,22.248,-17.141)
N3: (0.594,20.905,-17.932)
N7: (0.567,17.453,-18.960)
N9: (-0.879,19.162,-18.790)
O5': (-3.583,17.013,-20.893)
O3': (-3.812,20.622,-21.971)
OP1: (3.195,5.616,-24.233)
OP2: (1.142,6.842,-23.305)
C3': (5.153,8.381,-20.518)
C1': (4.757,10.676,-21.023)
C5': (4.833,7.639,-22.930)
O6: (-0.347,13.607,-19.868)
O4': (4.868,9.956,-22.241)
C8: (2.221,10.450,-21.159)
C2: (3.101,14.394,-19.451)
C6: (0.876,13.451,-19.906)
C5: (1.593,12.320,-20.373)
C4: (2.968,12.342,-20.338)
P: (2.519,6.874,-23.850)
C4': (5.443,8.651,-21.983)
C2': (5.273,9.772,-19.906)
O2': (6.600,10.115,-19.571)
N1: (1.722,14.468,-19.451)
N2: (3.772,15.459,-18.980)
N3: (3.781,13.340,-19.896)
N7: (1.135,11.120,-20.893)
N9: (3.374,11.127,-20.845)
O5': (3.430,7.640,-22.793)
O3': (6.083,7.442,-19.977)
OP2: (1.142,6.842,-23.305)
C3': (5.153,8.381,-20.518)
C1': (4.757,10.676,-21.023)
C5': (4.833,7.639,-22.930)
O6: (-0.347,13.607,-19.868)
O4': (4.868,9.956,-22.241)
C8: (2.221,10.450,-21.159)
C2: (3.101,14.394,-19.451)
C6: (0.876,13.451,-19.906)
C5: (1.593,12.320,-20.373)
C4: (2.968,12.342,-20.338)
P: (2.519,6.874,-23.850)
C4': (5.443,8.651,-21.983)
C2': (5.273,9.772,-19.906)
O2': (6.600,10.115,-19.571)
N1: (1.722,14.468,-19.451)
N2: (3.772,15.459,-18.980)
N3: (3.781,13.340,-19.896)
N7: (1.135,11.120,-20.893)
N9: (3.374,11.127,-20.845)
O5': (3.430,7.640,-22.793)
O3': (6.083,7.442,-19.977)
Image (generated by PyMOL):