Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8O:A471:A457
Extra
PDB:
ATOM 1 O3' U A 470 0.616 7.650 100.429 1.00 61.62 O
ATOM 2 P U A 471 -0.907 7.364 100.015 1.00 65.34 P
ATOM 3 OP1 U A 471 -1.402 8.569 99.290 1.00 65.34 O
ATOM 4 OP2 U A 471 -1.621 6.921 101.238 1.00 65.34 O
ATOM 5 O5' U A 471 -0.764 6.146 99.008 1.00 65.34 O
ATOM 6 C5' U A 471 0.172 6.179 97.939 1.00 65.34 C
ATOM 7 C4' U A 471 0.236 4.843 97.257 1.00 65.34 C
ATOM 8 O4' U A 471 1.090 3.955 98.027 1.00 65.34 O
ATOM 9 C3' U A 471 -1.097 4.109 97.165 1.00 65.34 C
ATOM 10 O3' U A 471 -1.863 4.493 96.038 1.00 65.34 O
ATOM 11 C2' U A 471 -0.691 2.647 97.168 1.00 65.34 C
ATOM 12 O2' U A 471 -0.265 2.234 95.882 1.00 65.34 O
ATOM 13 C1' U A 471 0.516 2.670 98.099 1.00 65.34 C
ATOM 14 N1 U A 471 0.133 2.402 99.501 1.00 65.76 N
ATOM 15 C2 U A 471 -0.085 1.086 99.823 1.00 65.76 C
ATOM 16 O2 U A 471 0.032 0.185 99.018 1.00 65.76 O
ATOM 17 N3 U A 471 -0.449 0.852 101.117 1.00 65.76 N
ATOM 18 C4 U A 471 -0.620 1.774 102.114 1.00 65.76 C
ATOM 19 O4 U A 471 -0.955 1.365 103.227 1.00 65.76 O
ATOM 20 C5 U A 471 -0.377 3.128 101.713 1.00 65.76 C
ATOM 21 C6 U A 471 -0.021 3.385 100.447 1.00 65.76 C
ATOM 22 P G A 472 -3.367 3.957 95.863 1.00 69.56 P
ATOM 23 OP1 G A 472 -4.111 4.968 95.080 1.00 69.56 O
ATOM 24 OP2 G A 472 -3.859 3.597 97.210 1.00 69.56 O
ATOM 25 O5' G A 472 -3.164 2.646 94.992 1.00 69.56 O
TER
ATOM 1 O3' U B 456 -2.769 -9.410 103.902 1.00 83.55 O
ATOM 2 P A B 457 -1.272 -9.503 104.457 1.00 73.13 P
ATOM 3 OP1 A B 457 -1.090 -10.870 104.994 1.00 73.13 O
ATOM 4 OP2 A B 457 -1.069 -8.354 105.370 1.00 73.13 O
ATOM 5 O5' A B 457 -0.410 -9.311 103.126 1.00 73.13 O
ATOM 6 C5' A B 457 -0.858 -9.853 101.890 1.00 73.13 C
ATOM 7 C4' A B 457 -0.468 -8.982 100.721 1.00 73.13 C
ATOM 8 O4' A B 457 -1.428 -7.903 100.557 1.00 73.13 O
ATOM 9 C3' A B 457 0.857 -8.253 100.840 1.00 73.13 C
ATOM 10 O3' A B 457 1.978 -9.078 100.614 1.00 73.13 O
ATOM 11 C2' A B 457 0.692 -7.135 99.827 1.00 73.13 C
ATOM 12 O2' A B 457 0.793 -7.632 98.498 1.00 73.13 O
ATOM 13 C1' A B 457 -0.755 -6.739 100.094 1.00 73.13 C
ATOM 14 N9 A B 457 -0.852 -5.689 101.134 1.00 71.97 N
ATOM 15 C8 A B 457 -1.335 -5.804 102.417 1.00 71.97 C
ATOM 16 N7 A B 457 -1.298 -4.691 103.109 1.00 71.97 N
ATOM 17 C5 A B 457 -0.745 -3.772 102.227 1.00 71.97 C
ATOM 18 C6 A B 457 -0.436 -2.403 102.358 1.00 71.97 C
ATOM 19 N6 A B 457 -0.647 -1.683 103.465 1.00 71.97 N
ATOM 20 N1 A B 457 0.107 -1.791 101.284 1.00 71.97 N
ATOM 21 C2 A B 457 0.314 -2.499 100.164 1.00 71.97 C
ATOM 22 N3 A B 457 0.072 -3.786 99.920 1.00 71.97 N
ATOM 23 C4 A B 457 -0.465 -4.373 101.006 1.00 71.97 C
ATOM 24 P A B 458 3.113 -9.188 101.741 1.00 78.76 P
ATOM 25 OP1 A B 458 3.707 -10.544 101.635 1.00 78.76 O
ATOM 26 OP2 A B 458 2.489 -8.780 103.029 1.00 78.76 O
ATOM 27 O5' A B 458 4.168 -8.087 101.278 1.00 78.76 O
TER
ATOM 2 P U A 471 -0.907 7.364 100.015 1.00 65.34 P
ATOM 3 OP1 U A 471 -1.402 8.569 99.290 1.00 65.34 O
ATOM 4 OP2 U A 471 -1.621 6.921 101.238 1.00 65.34 O
ATOM 5 O5' U A 471 -0.764 6.146 99.008 1.00 65.34 O
ATOM 6 C5' U A 471 0.172 6.179 97.939 1.00 65.34 C
ATOM 7 C4' U A 471 0.236 4.843 97.257 1.00 65.34 C
ATOM 8 O4' U A 471 1.090 3.955 98.027 1.00 65.34 O
ATOM 9 C3' U A 471 -1.097 4.109 97.165 1.00 65.34 C
ATOM 10 O3' U A 471 -1.863 4.493 96.038 1.00 65.34 O
ATOM 11 C2' U A 471 -0.691 2.647 97.168 1.00 65.34 C
ATOM 12 O2' U A 471 -0.265 2.234 95.882 1.00 65.34 O
ATOM 13 C1' U A 471 0.516 2.670 98.099 1.00 65.34 C
ATOM 14 N1 U A 471 0.133 2.402 99.501 1.00 65.76 N
ATOM 15 C2 U A 471 -0.085 1.086 99.823 1.00 65.76 C
ATOM 16 O2 U A 471 0.032 0.185 99.018 1.00 65.76 O
ATOM 17 N3 U A 471 -0.449 0.852 101.117 1.00 65.76 N
ATOM 18 C4 U A 471 -0.620 1.774 102.114 1.00 65.76 C
ATOM 19 O4 U A 471 -0.955 1.365 103.227 1.00 65.76 O
ATOM 20 C5 U A 471 -0.377 3.128 101.713 1.00 65.76 C
ATOM 21 C6 U A 471 -0.021 3.385 100.447 1.00 65.76 C
ATOM 22 P G A 472 -3.367 3.957 95.863 1.00 69.56 P
ATOM 23 OP1 G A 472 -4.111 4.968 95.080 1.00 69.56 O
ATOM 24 OP2 G A 472 -3.859 3.597 97.210 1.00 69.56 O
ATOM 25 O5' G A 472 -3.164 2.646 94.992 1.00 69.56 O
TER
ATOM 1 O3' U B 456 -2.769 -9.410 103.902 1.00 83.55 O
ATOM 2 P A B 457 -1.272 -9.503 104.457 1.00 73.13 P
ATOM 3 OP1 A B 457 -1.090 -10.870 104.994 1.00 73.13 O
ATOM 4 OP2 A B 457 -1.069 -8.354 105.370 1.00 73.13 O
ATOM 5 O5' A B 457 -0.410 -9.311 103.126 1.00 73.13 O
ATOM 6 C5' A B 457 -0.858 -9.853 101.890 1.00 73.13 C
ATOM 7 C4' A B 457 -0.468 -8.982 100.721 1.00 73.13 C
ATOM 8 O4' A B 457 -1.428 -7.903 100.557 1.00 73.13 O
ATOM 9 C3' A B 457 0.857 -8.253 100.840 1.00 73.13 C
ATOM 10 O3' A B 457 1.978 -9.078 100.614 1.00 73.13 O
ATOM 11 C2' A B 457 0.692 -7.135 99.827 1.00 73.13 C
ATOM 12 O2' A B 457 0.793 -7.632 98.498 1.00 73.13 O
ATOM 13 C1' A B 457 -0.755 -6.739 100.094 1.00 73.13 C
ATOM 14 N9 A B 457 -0.852 -5.689 101.134 1.00 71.97 N
ATOM 15 C8 A B 457 -1.335 -5.804 102.417 1.00 71.97 C
ATOM 16 N7 A B 457 -1.298 -4.691 103.109 1.00 71.97 N
ATOM 17 C5 A B 457 -0.745 -3.772 102.227 1.00 71.97 C
ATOM 18 C6 A B 457 -0.436 -2.403 102.358 1.00 71.97 C
ATOM 19 N6 A B 457 -0.647 -1.683 103.465 1.00 71.97 N
ATOM 20 N1 A B 457 0.107 -1.791 101.284 1.00 71.97 N
ATOM 21 C2 A B 457 0.314 -2.499 100.164 1.00 71.97 C
ATOM 22 N3 A B 457 0.072 -3.786 99.920 1.00 71.97 N
ATOM 23 C4 A B 457 -0.465 -4.373 101.006 1.00 71.97 C
ATOM 24 P A B 458 3.113 -9.188 101.741 1.00 78.76 P
ATOM 25 OP1 A B 458 3.707 -10.544 101.635 1.00 78.76 O
ATOM 26 OP2 A B 458 2.489 -8.780 103.029 1.00 78.76 O
ATOM 27 O5' A B 458 4.168 -8.087 101.278 1.00 78.76 O
TER
Atoms:
C4: (-0.620,1.774,102.114)
N3: (-0.449,0.852,101.117)
OP1: (-1.402,8.569,99.290)
OP2: (-1.621,6.921,101.238)
C2: (-0.085,1.086,99.823)
C1': (0.516,2.670,98.099)
C3': (-1.097,4.109,97.165)
O5': (-0.764,6.146,99.008)
O4': (1.090,3.955,98.027)
C5': (0.172,6.179,97.939)
P: (-0.907,7.364,100.015)
C4': (0.236,4.843,97.257)
C2': (-0.691,2.647,97.168)
O2': (-0.265,2.234,95.882)
N1: (0.133,2.402,99.501)
O4: (-0.955,1.365,103.227)
O2: (0.032,0.185,99.018)
C6: (-0.021,3.385,100.447)
C5: (-0.377,3.128,101.713)
O3': (-1.863,4.493,96.038)
N3: (-0.449,0.852,101.117)
OP1: (-1.402,8.569,99.290)
OP2: (-1.621,6.921,101.238)
C2: (-0.085,1.086,99.823)
C1': (0.516,2.670,98.099)
C3': (-1.097,4.109,97.165)
O5': (-0.764,6.146,99.008)
O4': (1.090,3.955,98.027)
C5': (0.172,6.179,97.939)
P: (-0.907,7.364,100.015)
C4': (0.236,4.843,97.257)
C2': (-0.691,2.647,97.168)
O2': (-0.265,2.234,95.882)
N1: (0.133,2.402,99.501)
O4: (-0.955,1.365,103.227)
O2: (0.032,0.185,99.018)
C6: (-0.021,3.385,100.447)
C5: (-0.377,3.128,101.713)
O3': (-1.863,4.493,96.038)
OP1: (-1.090,-10.870,104.994)
OP2: (-1.069,-8.354,105.370)
C3': (0.857,-8.253,100.840)
C1': (-0.755,-6.739,100.094)
C5': (-0.858,-9.853,101.890)
O4': (-1.428,-7.903,100.557)
C8: (-1.335,-5.804,102.417)
O2': (0.793,-7.632,98.498)
C6: (-0.436,-2.403,102.358)
C5: (-0.745,-3.772,102.227)
C4: (-0.465,-4.373,101.006)
P: (-1.272,-9.503,104.457)
C4': (-0.468,-8.982,100.721)
C2': (0.692,-7.135,99.827)
C2: (0.314,-2.499,100.164)
N1: (0.107,-1.791,101.284)
N3: (0.072,-3.786,99.920)
N6: (-0.647,-1.683,103.465)
N7: (-1.298,-4.691,103.109)
N9: (-0.852,-5.689,101.134)
O5': (-0.410,-9.311,103.126)
O3': (1.978,-9.078,100.614)
OP2: (-1.069,-8.354,105.370)
C3': (0.857,-8.253,100.840)
C1': (-0.755,-6.739,100.094)
C5': (-0.858,-9.853,101.890)
O4': (-1.428,-7.903,100.557)
C8: (-1.335,-5.804,102.417)
O2': (0.793,-7.632,98.498)
C6: (-0.436,-2.403,102.358)
C5: (-0.745,-3.772,102.227)
C4: (-0.465,-4.373,101.006)
P: (-1.272,-9.503,104.457)
C4': (-0.468,-8.982,100.721)
C2': (0.692,-7.135,99.827)
C2: (0.314,-2.499,100.164)
N1: (0.107,-1.791,101.284)
N3: (0.072,-3.786,99.920)
N6: (-0.647,-1.683,103.465)
N7: (-1.298,-4.691,103.109)
N9: (-0.852,-5.689,101.134)
O5': (-0.410,-9.311,103.126)
O3': (1.978,-9.078,100.614)
Image (generated by PyMOL):