Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJ9:0456:0461
Extra
PDB:
ATOM 1 O3' G A 455 59.770 149.285 64.234 1.00 42.30 O
ATOM 2 P U A 456 61.368 149.135 64.337 1.00 45.51 P
ATOM 3 OP1 U A 456 61.802 149.889 65.552 1.00 44.17 O
ATOM 4 OP2 U A 456 61.981 149.459 63.014 1.00 42.82 O
ATOM 5 O5' U A 456 61.586 147.583 64.623 1.00 42.73 O
ATOM 6 C5' U A 456 61.452 147.052 65.949 1.00 40.66 C
ATOM 7 C4' U A 456 62.142 145.719 66.039 1.00 41.18 C
ATOM 8 O4' U A 456 61.579 144.848 65.028 1.00 42.02 O
ATOM 9 C3' U A 456 63.631 145.707 65.727 1.00 40.87 C
ATOM 10 O3' U A 456 64.411 146.076 66.857 1.00 41.15 O
ATOM 11 C2' U A 456 63.856 144.255 65.333 1.00 40.74 C
ATOM 12 O2' U A 456 63.889 143.368 66.433 1.00 37.91 O
ATOM 13 C1' U A 456 62.580 143.969 64.544 1.00 40.71 C
ATOM 14 N1 U A 456 62.742 144.179 63.097 1.00 40.64 N
ATOM 15 C2 U A 456 63.343 143.159 62.367 1.00 41.28 C
ATOM 16 O2 U A 456 63.717 142.111 62.866 1.00 40.37 O
ATOM 17 N3 U A 456 63.489 143.417 61.028 1.00 41.70 N
ATOM 18 C4 U A 456 63.111 144.556 60.359 1.00 40.90 C
ATOM 19 O4 U A 456 63.441 144.690 59.185 1.00 43.83 O
ATOM 20 C5 U A 456 62.479 145.550 61.172 1.00 39.23 C
ATOM 21 C6 U A 456 62.323 145.336 62.481 1.00 38.87 C
ATOM 22 P G A 457 65.780 146.885 66.651 1.00 40.97 P
ATOM 23 OP1 G A 457 66.276 147.197 68.007 1.00 41.50 O
ATOM 24 OP2 G A 457 65.522 147.988 65.688 1.00 41.55 O
ATOM 25 O5' G A 457 66.771 145.835 65.983 1.00 38.24 O
TER
ATOM 1 O3' A B 460 70.570 136.607 53.849 1.00 35.03 O
ATOM 2 P A B 461 69.155 136.896 53.155 1.00 37.70 P
ATOM 3 OP1 A B 461 68.988 135.857 52.125 1.00 36.63 O
ATOM 4 OP2 A B 461 69.104 138.323 52.765 1.00 39.79 O
ATOM 5 O5' A B 461 68.077 136.679 54.304 1.00 35.48 O
ATOM 6 C5' A B 461 67.900 135.399 54.903 1.00 35.27 C
ATOM 7 C4' A B 461 67.560 135.552 56.365 1.00 38.33 C
ATOM 8 O4' A B 461 68.095 136.819 56.851 1.00 37.32 O
ATOM 9 C3' A B 461 66.092 135.650 56.750 1.00 37.35 C
ATOM 10 O3' A B 461 65.442 134.387 56.777 1.00 36.05 O
ATOM 11 C2' A B 461 66.201 136.248 58.144 1.00 36.73 C
ATOM 12 O2' A B 461 66.671 135.295 59.084 1.00 35.18 O
ATOM 13 C1' A B 461 67.288 137.299 57.918 1.00 35.82 C
ATOM 14 N9 A B 461 66.729 138.595 57.529 1.00 35.70 N
ATOM 15 C8 A B 461 66.731 139.169 56.284 1.00 36.17 C
ATOM 16 N7 A B 461 66.137 140.336 56.241 1.00 36.90 N
ATOM 17 C5 A B 461 65.721 140.549 57.544 1.00 34.75 C
ATOM 18 C6 A B 461 65.044 141.615 58.153 1.00 35.93 C
ATOM 19 N6 A B 461 64.667 142.719 57.505 1.00 34.79 N
ATOM 20 N1 A B 461 64.773 141.516 59.473 1.00 37.20 N
ATOM 21 C2 A B 461 65.177 140.419 60.127 1.00 38.42 C
ATOM 22 N3 A B 461 65.833 139.358 59.666 1.00 38.27 N
ATOM 23 C4 A B 461 66.078 139.486 58.350 1.00 36.05 C
ATOM 24 P C B 462 63.863 134.303 56.487 1.00 36.74 P
ATOM 25 OP1 C B 462 63.528 132.864 56.563 1.00 35.89 O
ATOM 26 OP2 C B 462 63.553 135.062 55.249 1.00 36.34 O
ATOM 27 O5' C B 462 63.196 135.056 57.722 1.00 32.30 O
TER
ATOM 2 P U A 456 61.368 149.135 64.337 1.00 45.51 P
ATOM 3 OP1 U A 456 61.802 149.889 65.552 1.00 44.17 O
ATOM 4 OP2 U A 456 61.981 149.459 63.014 1.00 42.82 O
ATOM 5 O5' U A 456 61.586 147.583 64.623 1.00 42.73 O
ATOM 6 C5' U A 456 61.452 147.052 65.949 1.00 40.66 C
ATOM 7 C4' U A 456 62.142 145.719 66.039 1.00 41.18 C
ATOM 8 O4' U A 456 61.579 144.848 65.028 1.00 42.02 O
ATOM 9 C3' U A 456 63.631 145.707 65.727 1.00 40.87 C
ATOM 10 O3' U A 456 64.411 146.076 66.857 1.00 41.15 O
ATOM 11 C2' U A 456 63.856 144.255 65.333 1.00 40.74 C
ATOM 12 O2' U A 456 63.889 143.368 66.433 1.00 37.91 O
ATOM 13 C1' U A 456 62.580 143.969 64.544 1.00 40.71 C
ATOM 14 N1 U A 456 62.742 144.179 63.097 1.00 40.64 N
ATOM 15 C2 U A 456 63.343 143.159 62.367 1.00 41.28 C
ATOM 16 O2 U A 456 63.717 142.111 62.866 1.00 40.37 O
ATOM 17 N3 U A 456 63.489 143.417 61.028 1.00 41.70 N
ATOM 18 C4 U A 456 63.111 144.556 60.359 1.00 40.90 C
ATOM 19 O4 U A 456 63.441 144.690 59.185 1.00 43.83 O
ATOM 20 C5 U A 456 62.479 145.550 61.172 1.00 39.23 C
ATOM 21 C6 U A 456 62.323 145.336 62.481 1.00 38.87 C
ATOM 22 P G A 457 65.780 146.885 66.651 1.00 40.97 P
ATOM 23 OP1 G A 457 66.276 147.197 68.007 1.00 41.50 O
ATOM 24 OP2 G A 457 65.522 147.988 65.688 1.00 41.55 O
ATOM 25 O5' G A 457 66.771 145.835 65.983 1.00 38.24 O
TER
ATOM 1 O3' A B 460 70.570 136.607 53.849 1.00 35.03 O
ATOM 2 P A B 461 69.155 136.896 53.155 1.00 37.70 P
ATOM 3 OP1 A B 461 68.988 135.857 52.125 1.00 36.63 O
ATOM 4 OP2 A B 461 69.104 138.323 52.765 1.00 39.79 O
ATOM 5 O5' A B 461 68.077 136.679 54.304 1.00 35.48 O
ATOM 6 C5' A B 461 67.900 135.399 54.903 1.00 35.27 C
ATOM 7 C4' A B 461 67.560 135.552 56.365 1.00 38.33 C
ATOM 8 O4' A B 461 68.095 136.819 56.851 1.00 37.32 O
ATOM 9 C3' A B 461 66.092 135.650 56.750 1.00 37.35 C
ATOM 10 O3' A B 461 65.442 134.387 56.777 1.00 36.05 O
ATOM 11 C2' A B 461 66.201 136.248 58.144 1.00 36.73 C
ATOM 12 O2' A B 461 66.671 135.295 59.084 1.00 35.18 O
ATOM 13 C1' A B 461 67.288 137.299 57.918 1.00 35.82 C
ATOM 14 N9 A B 461 66.729 138.595 57.529 1.00 35.70 N
ATOM 15 C8 A B 461 66.731 139.169 56.284 1.00 36.17 C
ATOM 16 N7 A B 461 66.137 140.336 56.241 1.00 36.90 N
ATOM 17 C5 A B 461 65.721 140.549 57.544 1.00 34.75 C
ATOM 18 C6 A B 461 65.044 141.615 58.153 1.00 35.93 C
ATOM 19 N6 A B 461 64.667 142.719 57.505 1.00 34.79 N
ATOM 20 N1 A B 461 64.773 141.516 59.473 1.00 37.20 N
ATOM 21 C2 A B 461 65.177 140.419 60.127 1.00 38.42 C
ATOM 22 N3 A B 461 65.833 139.358 59.666 1.00 38.27 N
ATOM 23 C4 A B 461 66.078 139.486 58.350 1.00 36.05 C
ATOM 24 P C B 462 63.863 134.303 56.487 1.00 36.74 P
ATOM 25 OP1 C B 462 63.528 132.864 56.563 1.00 35.89 O
ATOM 26 OP2 C B 462 63.553 135.062 55.249 1.00 36.34 O
ATOM 27 O5' C B 462 63.196 135.056 57.722 1.00 32.30 O
TER
Atoms:
C4: (63.111,144.556,60.359)
N3: (63.489,143.417,61.028)
OP1: (61.802,149.889,65.552)
OP2: (61.981,149.459,63.014)
C2: (63.343,143.159,62.367)
C1': (62.580,143.969,64.544)
C3': (63.631,145.707,65.727)
O5': (61.586,147.583,64.623)
O4': (61.579,144.848,65.028)
C5': (61.452,147.052,65.949)
P: (61.368,149.135,64.337)
C4': (62.142,145.719,66.039)
C2': (63.856,144.255,65.333)
O2': (63.889,143.368,66.433)
N1: (62.742,144.179,63.097)
O4: (63.441,144.690,59.185)
O2: (63.717,142.111,62.866)
C6: (62.323,145.336,62.481)
C5: (62.479,145.550,61.172)
O3': (64.411,146.076,66.857)
N3: (63.489,143.417,61.028)
OP1: (61.802,149.889,65.552)
OP2: (61.981,149.459,63.014)
C2: (63.343,143.159,62.367)
C1': (62.580,143.969,64.544)
C3': (63.631,145.707,65.727)
O5': (61.586,147.583,64.623)
O4': (61.579,144.848,65.028)
C5': (61.452,147.052,65.949)
P: (61.368,149.135,64.337)
C4': (62.142,145.719,66.039)
C2': (63.856,144.255,65.333)
O2': (63.889,143.368,66.433)
N1: (62.742,144.179,63.097)
O4: (63.441,144.690,59.185)
O2: (63.717,142.111,62.866)
C6: (62.323,145.336,62.481)
C5: (62.479,145.550,61.172)
O3': (64.411,146.076,66.857)
OP1: (68.988,135.857,52.125)
OP2: (69.104,138.323,52.765)
C3': (66.092,135.650,56.750)
C1': (67.288,137.299,57.918)
C5': (67.900,135.399,54.903)
O4': (68.095,136.819,56.851)
C8: (66.731,139.169,56.284)
O2': (66.671,135.295,59.084)
C6: (65.044,141.615,58.153)
C5: (65.721,140.549,57.544)
C4: (66.078,139.486,58.350)
P: (69.155,136.896,53.155)
C4': (67.560,135.552,56.365)
C2': (66.201,136.248,58.144)
C2: (65.177,140.419,60.127)
N1: (64.773,141.516,59.473)
N3: (65.833,139.358,59.666)
N6: (64.667,142.719,57.505)
N7: (66.137,140.336,56.241)
N9: (66.729,138.595,57.529)
O5': (68.077,136.679,54.304)
O3': (65.442,134.387,56.777)
OP2: (69.104,138.323,52.765)
C3': (66.092,135.650,56.750)
C1': (67.288,137.299,57.918)
C5': (67.900,135.399,54.903)
O4': (68.095,136.819,56.851)
C8: (66.731,139.169,56.284)
O2': (66.671,135.295,59.084)
C6: (65.044,141.615,58.153)
C5: (65.721,140.549,57.544)
C4: (66.078,139.486,58.350)
P: (69.155,136.896,53.155)
C4': (67.560,135.552,56.365)
C2': (66.201,136.248,58.144)
C2: (65.177,140.419,60.127)
N1: (64.773,141.516,59.473)
N3: (65.833,139.358,59.666)
N6: (64.667,142.719,57.505)
N7: (66.137,140.336,56.241)
N9: (66.729,138.595,57.529)
O5': (68.077,136.679,54.304)
O3': (65.442,134.387,56.777)
Image (generated by PyMOL):