Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:02500:02031
Extra
PDB:
ATOM 1 O3' G A2499 35.692 156.840 113.259 1.00 40.99 O
ATOM 2 P U A2500 34.131 156.864 113.630 1.00 40.45 P
ATOM 3 OP1 U A2500 33.736 158.292 113.705 1.00 39.62 O
ATOM 4 OP2 U A2500 33.890 155.975 114.789 1.00 39.69 O
ATOM 5 O5' U A2500 33.440 156.208 112.357 1.00 41.82 O
ATOM 6 C5' U A2500 33.624 156.781 111.052 1.00 40.77 C
ATOM 7 C4' U A2500 32.944 155.927 110.016 1.00 41.66 C
ATOM 8 O4' U A2500 33.556 154.611 109.991 1.00 41.41 O
ATOM 9 C3' U A2500 31.471 155.648 110.265 1.00 40.66 C
ATOM 10 O3' U A2500 30.681 156.743 109.807 1.00 40.55 O
ATOM 11 C2' U A2500 31.253 154.375 109.456 1.00 40.92 C
ATOM 12 O2' U A2500 31.162 154.626 108.069 1.00 41.52 O
ATOM 13 C1' U A2500 32.567 153.634 109.705 1.00 39.90 C
ATOM 14 N1 U A2500 32.535 152.655 110.805 1.00 38.71 N
ATOM 15 C2 U A2500 31.944 151.437 110.559 1.00 37.91 C
ATOM 16 O2 U A2500 31.399 151.169 109.510 1.00 41.43 O
ATOM 17 N3 U A2500 32.008 150.540 111.593 1.00 38.68 N
ATOM 18 C4 U A2500 32.579 150.734 112.831 1.00 37.17 C
ATOM 19 O4 U A2500 32.567 149.817 113.656 1.00 36.15 O
ATOM 20 C5 U A2500 33.144 152.029 113.023 1.00 37.33 C
ATOM 21 C6 U A2500 33.101 152.926 112.033 1.00 38.82 C
ATOM 22 P G A2501 29.138 156.862 110.240 1.00 38.90 P
ATOM 23 OP1 G A2501 28.620 157.990 109.433 1.00 37.65 O
ATOM 24 OP2 G A2501 29.014 156.906 111.714 1.00 39.64 O
ATOM 25 O5' G A2501 28.504 155.501 109.707 1.00 39.00 O
TER
ATOM 1 O3' C B2030 30.008 139.099 111.561 1.00 37.87 O
ATOM 2 P A B2031 31.385 139.500 110.841 1.00 37.62 P
ATOM 3 OP1 A B2031 31.881 138.284 110.151 1.00 38.90 O
ATOM 4 OP2 A B2031 32.254 140.192 111.822 1.00 38.04 O
ATOM 5 O5' A B2031 30.948 140.573 109.749 1.00 37.90 O
ATOM 6 C5' A B2031 29.933 140.268 108.773 1.00 37.25 C
ATOM 7 C4' A B2031 29.600 141.501 107.971 1.00 36.38 C
ATOM 8 O4' A B2031 28.943 142.477 108.816 1.00 36.92 O
ATOM 9 C3' A B2031 30.805 142.238 107.424 1.00 37.81 C
ATOM 10 O3' A B2031 31.256 141.649 106.215 1.00 39.61 O
ATOM 11 C2' A B2031 30.266 143.645 107.232 1.00 37.23 C
ATOM 12 O2' A B2031 29.482 143.735 106.061 1.00 36.79 O
ATOM 13 C1' A B2031 29.370 143.787 108.464 1.00 36.46 C
ATOM 14 N9 A B2031 30.056 144.357 109.626 1.00 36.37 N
ATOM 15 C8 A B2031 30.498 143.666 110.727 1.00 36.57 C
ATOM 16 N7 A B2031 31.069 144.422 111.632 1.00 37.29 N
ATOM 17 C5 A B2031 31.005 145.695 111.093 1.00 33.82 C
ATOM 18 C6 A B2031 31.442 146.938 111.571 1.00 34.22 C
ATOM 19 N6 A B2031 32.043 147.102 112.750 1.00 30.52 N
ATOM 20 N1 A B2031 31.234 148.019 110.790 1.00 33.56 N
ATOM 21 C2 A B2031 30.623 147.846 109.611 1.00 34.61 C
ATOM 22 N3 A B2031 30.163 146.726 109.054 1.00 34.67 N
ATOM 23 C4 A B2031 30.387 145.673 109.855 1.00 35.01 C
ATOM 24 P C B2032 32.791 141.804 105.782 1.00 39.49 P
ATOM 25 OP1 C B2032 32.945 141.042 104.517 1.00 40.95 O
ATOM 26 OP2 C B2032 33.646 141.475 106.948 1.00 38.54 O
ATOM 27 O5' C B2032 32.947 143.360 105.473 1.00 38.69 O
TER
ATOM 2 P U A2500 34.131 156.864 113.630 1.00 40.45 P
ATOM 3 OP1 U A2500 33.736 158.292 113.705 1.00 39.62 O
ATOM 4 OP2 U A2500 33.890 155.975 114.789 1.00 39.69 O
ATOM 5 O5' U A2500 33.440 156.208 112.357 1.00 41.82 O
ATOM 6 C5' U A2500 33.624 156.781 111.052 1.00 40.77 C
ATOM 7 C4' U A2500 32.944 155.927 110.016 1.00 41.66 C
ATOM 8 O4' U A2500 33.556 154.611 109.991 1.00 41.41 O
ATOM 9 C3' U A2500 31.471 155.648 110.265 1.00 40.66 C
ATOM 10 O3' U A2500 30.681 156.743 109.807 1.00 40.55 O
ATOM 11 C2' U A2500 31.253 154.375 109.456 1.00 40.92 C
ATOM 12 O2' U A2500 31.162 154.626 108.069 1.00 41.52 O
ATOM 13 C1' U A2500 32.567 153.634 109.705 1.00 39.90 C
ATOM 14 N1 U A2500 32.535 152.655 110.805 1.00 38.71 N
ATOM 15 C2 U A2500 31.944 151.437 110.559 1.00 37.91 C
ATOM 16 O2 U A2500 31.399 151.169 109.510 1.00 41.43 O
ATOM 17 N3 U A2500 32.008 150.540 111.593 1.00 38.68 N
ATOM 18 C4 U A2500 32.579 150.734 112.831 1.00 37.17 C
ATOM 19 O4 U A2500 32.567 149.817 113.656 1.00 36.15 O
ATOM 20 C5 U A2500 33.144 152.029 113.023 1.00 37.33 C
ATOM 21 C6 U A2500 33.101 152.926 112.033 1.00 38.82 C
ATOM 22 P G A2501 29.138 156.862 110.240 1.00 38.90 P
ATOM 23 OP1 G A2501 28.620 157.990 109.433 1.00 37.65 O
ATOM 24 OP2 G A2501 29.014 156.906 111.714 1.00 39.64 O
ATOM 25 O5' G A2501 28.504 155.501 109.707 1.00 39.00 O
TER
ATOM 1 O3' C B2030 30.008 139.099 111.561 1.00 37.87 O
ATOM 2 P A B2031 31.385 139.500 110.841 1.00 37.62 P
ATOM 3 OP1 A B2031 31.881 138.284 110.151 1.00 38.90 O
ATOM 4 OP2 A B2031 32.254 140.192 111.822 1.00 38.04 O
ATOM 5 O5' A B2031 30.948 140.573 109.749 1.00 37.90 O
ATOM 6 C5' A B2031 29.933 140.268 108.773 1.00 37.25 C
ATOM 7 C4' A B2031 29.600 141.501 107.971 1.00 36.38 C
ATOM 8 O4' A B2031 28.943 142.477 108.816 1.00 36.92 O
ATOM 9 C3' A B2031 30.805 142.238 107.424 1.00 37.81 C
ATOM 10 O3' A B2031 31.256 141.649 106.215 1.00 39.61 O
ATOM 11 C2' A B2031 30.266 143.645 107.232 1.00 37.23 C
ATOM 12 O2' A B2031 29.482 143.735 106.061 1.00 36.79 O
ATOM 13 C1' A B2031 29.370 143.787 108.464 1.00 36.46 C
ATOM 14 N9 A B2031 30.056 144.357 109.626 1.00 36.37 N
ATOM 15 C8 A B2031 30.498 143.666 110.727 1.00 36.57 C
ATOM 16 N7 A B2031 31.069 144.422 111.632 1.00 37.29 N
ATOM 17 C5 A B2031 31.005 145.695 111.093 1.00 33.82 C
ATOM 18 C6 A B2031 31.442 146.938 111.571 1.00 34.22 C
ATOM 19 N6 A B2031 32.043 147.102 112.750 1.00 30.52 N
ATOM 20 N1 A B2031 31.234 148.019 110.790 1.00 33.56 N
ATOM 21 C2 A B2031 30.623 147.846 109.611 1.00 34.61 C
ATOM 22 N3 A B2031 30.163 146.726 109.054 1.00 34.67 N
ATOM 23 C4 A B2031 30.387 145.673 109.855 1.00 35.01 C
ATOM 24 P C B2032 32.791 141.804 105.782 1.00 39.49 P
ATOM 25 OP1 C B2032 32.945 141.042 104.517 1.00 40.95 O
ATOM 26 OP2 C B2032 33.646 141.475 106.948 1.00 38.54 O
ATOM 27 O5' C B2032 32.947 143.360 105.473 1.00 38.69 O
TER
Atoms:
C4: (32.579,150.734,112.831)
N3: (32.008,150.540,111.593)
OP1: (33.736,158.292,113.705)
OP2: (33.890,155.975,114.789)
C2: (31.944,151.437,110.559)
C1': (32.567,153.634,109.705)
C3': (31.471,155.648,110.265)
O5': (33.440,156.208,112.357)
O4': (33.556,154.611,109.991)
C5': (33.624,156.781,111.052)
P: (34.131,156.864,113.630)
C4': (32.944,155.927,110.016)
C2': (31.253,154.375,109.456)
O2': (31.162,154.626,108.069)
N1: (32.535,152.655,110.805)
O4: (32.567,149.817,113.656)
O2: (31.399,151.169,109.510)
C6: (33.101,152.926,112.033)
C5: (33.144,152.029,113.023)
O3': (30.681,156.743,109.807)
N3: (32.008,150.540,111.593)
OP1: (33.736,158.292,113.705)
OP2: (33.890,155.975,114.789)
C2: (31.944,151.437,110.559)
C1': (32.567,153.634,109.705)
C3': (31.471,155.648,110.265)
O5': (33.440,156.208,112.357)
O4': (33.556,154.611,109.991)
C5': (33.624,156.781,111.052)
P: (34.131,156.864,113.630)
C4': (32.944,155.927,110.016)
C2': (31.253,154.375,109.456)
O2': (31.162,154.626,108.069)
N1: (32.535,152.655,110.805)
O4: (32.567,149.817,113.656)
O2: (31.399,151.169,109.510)
C6: (33.101,152.926,112.033)
C5: (33.144,152.029,113.023)
O3': (30.681,156.743,109.807)
OP1: (31.881,138.284,110.151)
OP2: (32.254,140.192,111.822)
C3': (30.805,142.238,107.424)
C1': (29.370,143.787,108.464)
C5': (29.933,140.268,108.773)
O4': (28.943,142.477,108.816)
C8: (30.498,143.666,110.727)
O2': (29.482,143.735,106.061)
C6: (31.442,146.938,111.571)
C5: (31.005,145.695,111.093)
C4: (30.387,145.673,109.855)
P: (31.385,139.500,110.841)
C4': (29.600,141.501,107.971)
C2': (30.266,143.645,107.232)
C2: (30.623,147.846,109.611)
N1: (31.234,148.019,110.790)
N3: (30.163,146.726,109.054)
N6: (32.043,147.102,112.750)
N7: (31.069,144.422,111.632)
N9: (30.056,144.357,109.626)
O5': (30.948,140.573,109.749)
O3': (31.256,141.649,106.215)
OP2: (32.254,140.192,111.822)
C3': (30.805,142.238,107.424)
C1': (29.370,143.787,108.464)
C5': (29.933,140.268,108.773)
O4': (28.943,142.477,108.816)
C8: (30.498,143.666,110.727)
O2': (29.482,143.735,106.061)
C6: (31.442,146.938,111.571)
C5: (31.005,145.695,111.093)
C4: (30.387,145.673,109.855)
P: (31.385,139.500,110.841)
C4': (29.600,141.501,107.971)
C2': (30.266,143.645,107.232)
C2: (30.623,147.846,109.611)
N1: (31.234,148.019,110.790)
N3: (30.163,146.726,109.054)
N6: (32.043,147.102,112.750)
N7: (31.069,144.422,111.632)
N9: (30.056,144.357,109.626)
O5': (30.948,140.573,109.749)
O3': (31.256,141.649,106.215)
Image (generated by PyMOL):