Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1KD1:A1306:A1266
Extra
PDB:
ATOM 1 O3' U A1305 14.818 109.468 56.625 1.00 45.91 O
ATOM 2 P U A1306 16.268 108.842 56.854 1.00 45.39 P
ATOM 3 OP1 U A1306 16.045 107.644 57.678 1.00 46.50 O
ATOM 4 OP2 U A1306 17.172 109.922 57.345 1.00 46.37 O
ATOM 5 O5' U A1306 16.733 108.394 55.395 1.00 44.73 O
ATOM 6 C5' U A1306 16.042 107.342 54.697 1.00 45.15 C
ATOM 7 C4' U A1306 16.541 107.207 53.275 1.00 45.58 C
ATOM 8 O4' U A1306 16.284 108.435 52.555 1.00 45.35 O
ATOM 9 C3' U A1306 18.032 106.982 53.096 1.00 46.24 C
ATOM 10 O3' U A1306 18.447 105.639 53.268 1.00 46.46 O
ATOM 11 C2' U A1306 18.263 107.450 51.675 1.00 47.12 C
ATOM 12 O2' U A1306 17.904 106.473 50.711 1.00 46.40 O
ATOM 13 C1' U A1306 17.335 108.666 51.632 1.00 47.15 C
ATOM 14 N1 U A1306 18.040 109.897 52.021 1.00 48.12 N
ATOM 15 C2 U A1306 18.855 110.478 51.071 1.00 49.11 C
ATOM 16 O2 U A1306 19.038 109.986 49.954 1.00 50.93 O
ATOM 17 N3 U A1306 19.456 111.647 51.460 1.00 48.22 N
ATOM 18 C4 U A1306 19.330 112.281 52.670 1.00 47.83 C
ATOM 19 O4 U A1306 19.718 113.445 52.766 1.00 46.85 O
ATOM 20 C5 U A1306 18.504 111.592 53.616 1.00 48.06 C
ATOM 21 C6 U A1306 17.900 110.458 53.265 1.00 48.04 C
ATOM 22 P A A1307 19.906 105.347 53.866 1.00 47.23 P
ATOM 23 OP1 A A1307 20.118 103.905 54.133 1.00 46.88 O
ATOM 24 OP2 A A1307 20.081 106.336 54.955 1.00 46.04 O
ATOM 25 O5' A A1307 20.872 105.687 52.657 1.00 46.36 O
TER
ATOM 1 O3' U B1265 25.906 118.678 44.397 1.00 39.49 O
ATOM 2 P A B1266 24.369 118.936 43.992 1.00 39.68 P
ATOM 3 OP1 A B1266 24.400 119.513 42.630 1.00 39.10 O
ATOM 4 OP2 A B1266 23.678 119.675 45.078 1.00 39.60 O
ATOM 5 O5' A B1266 23.759 117.472 43.858 1.00 39.30 O
ATOM 6 C5' A B1266 24.279 116.557 42.874 1.00 39.83 C
ATOM 7 C4' A B1266 23.674 115.195 43.051 1.00 39.86 C
ATOM 8 O4' A B1266 24.091 114.653 44.326 1.00 39.13 O
ATOM 9 C3' A B1266 22.159 115.149 43.102 1.00 40.55 C
ATOM 10 O3' A B1266 21.581 115.171 41.791 1.00 44.82 O
ATOM 11 C2' A B1266 21.944 113.833 43.825 1.00 39.50 C
ATOM 12 O2' A B1266 22.260 112.755 42.969 1.00 38.74 O
ATOM 13 C1' A B1266 23.035 113.909 44.895 1.00 38.59 C
ATOM 14 N9 A B1266 22.631 114.559 46.151 1.00 39.11 N
ATOM 15 C8 A B1266 22.838 115.860 46.554 1.00 40.14 C
ATOM 16 N7 A B1266 22.353 116.128 47.744 1.00 40.67 N
ATOM 17 C5 A B1266 21.791 114.924 48.153 1.00 39.57 C
ATOM 18 C6 A B1266 21.110 114.543 49.322 1.00 40.43 C
ATOM 19 N6 A B1266 20.874 115.365 50.350 1.00 41.69 N
ATOM 20 N1 A B1266 20.671 113.271 49.402 1.00 40.44 N
ATOM 21 C2 A B1266 20.903 112.449 48.374 1.00 39.78 C
ATOM 22 N3 A B1266 21.526 112.690 47.230 1.00 39.03 N
ATOM 23 C4 A B1266 21.952 113.957 47.182 1.00 38.69 C
ATOM 24 P A B1267 20.160 115.890 41.551 1.00 47.05 P
ATOM 25 OP1 A B1267 20.048 116.203 40.108 1.00 48.31 O
ATOM 26 OP2 A B1267 20.001 116.977 42.538 1.00 48.10 O
ATOM 27 O5' A B1267 19.088 114.772 41.929 1.00 48.44 O
TER
ATOM 2 P U A1306 16.268 108.842 56.854 1.00 45.39 P
ATOM 3 OP1 U A1306 16.045 107.644 57.678 1.00 46.50 O
ATOM 4 OP2 U A1306 17.172 109.922 57.345 1.00 46.37 O
ATOM 5 O5' U A1306 16.733 108.394 55.395 1.00 44.73 O
ATOM 6 C5' U A1306 16.042 107.342 54.697 1.00 45.15 C
ATOM 7 C4' U A1306 16.541 107.207 53.275 1.00 45.58 C
ATOM 8 O4' U A1306 16.284 108.435 52.555 1.00 45.35 O
ATOM 9 C3' U A1306 18.032 106.982 53.096 1.00 46.24 C
ATOM 10 O3' U A1306 18.447 105.639 53.268 1.00 46.46 O
ATOM 11 C2' U A1306 18.263 107.450 51.675 1.00 47.12 C
ATOM 12 O2' U A1306 17.904 106.473 50.711 1.00 46.40 O
ATOM 13 C1' U A1306 17.335 108.666 51.632 1.00 47.15 C
ATOM 14 N1 U A1306 18.040 109.897 52.021 1.00 48.12 N
ATOM 15 C2 U A1306 18.855 110.478 51.071 1.00 49.11 C
ATOM 16 O2 U A1306 19.038 109.986 49.954 1.00 50.93 O
ATOM 17 N3 U A1306 19.456 111.647 51.460 1.00 48.22 N
ATOM 18 C4 U A1306 19.330 112.281 52.670 1.00 47.83 C
ATOM 19 O4 U A1306 19.718 113.445 52.766 1.00 46.85 O
ATOM 20 C5 U A1306 18.504 111.592 53.616 1.00 48.06 C
ATOM 21 C6 U A1306 17.900 110.458 53.265 1.00 48.04 C
ATOM 22 P A A1307 19.906 105.347 53.866 1.00 47.23 P
ATOM 23 OP1 A A1307 20.118 103.905 54.133 1.00 46.88 O
ATOM 24 OP2 A A1307 20.081 106.336 54.955 1.00 46.04 O
ATOM 25 O5' A A1307 20.872 105.687 52.657 1.00 46.36 O
TER
ATOM 1 O3' U B1265 25.906 118.678 44.397 1.00 39.49 O
ATOM 2 P A B1266 24.369 118.936 43.992 1.00 39.68 P
ATOM 3 OP1 A B1266 24.400 119.513 42.630 1.00 39.10 O
ATOM 4 OP2 A B1266 23.678 119.675 45.078 1.00 39.60 O
ATOM 5 O5' A B1266 23.759 117.472 43.858 1.00 39.30 O
ATOM 6 C5' A B1266 24.279 116.557 42.874 1.00 39.83 C
ATOM 7 C4' A B1266 23.674 115.195 43.051 1.00 39.86 C
ATOM 8 O4' A B1266 24.091 114.653 44.326 1.00 39.13 O
ATOM 9 C3' A B1266 22.159 115.149 43.102 1.00 40.55 C
ATOM 10 O3' A B1266 21.581 115.171 41.791 1.00 44.82 O
ATOM 11 C2' A B1266 21.944 113.833 43.825 1.00 39.50 C
ATOM 12 O2' A B1266 22.260 112.755 42.969 1.00 38.74 O
ATOM 13 C1' A B1266 23.035 113.909 44.895 1.00 38.59 C
ATOM 14 N9 A B1266 22.631 114.559 46.151 1.00 39.11 N
ATOM 15 C8 A B1266 22.838 115.860 46.554 1.00 40.14 C
ATOM 16 N7 A B1266 22.353 116.128 47.744 1.00 40.67 N
ATOM 17 C5 A B1266 21.791 114.924 48.153 1.00 39.57 C
ATOM 18 C6 A B1266 21.110 114.543 49.322 1.00 40.43 C
ATOM 19 N6 A B1266 20.874 115.365 50.350 1.00 41.69 N
ATOM 20 N1 A B1266 20.671 113.271 49.402 1.00 40.44 N
ATOM 21 C2 A B1266 20.903 112.449 48.374 1.00 39.78 C
ATOM 22 N3 A B1266 21.526 112.690 47.230 1.00 39.03 N
ATOM 23 C4 A B1266 21.952 113.957 47.182 1.00 38.69 C
ATOM 24 P A B1267 20.160 115.890 41.551 1.00 47.05 P
ATOM 25 OP1 A B1267 20.048 116.203 40.108 1.00 48.31 O
ATOM 26 OP2 A B1267 20.001 116.977 42.538 1.00 48.10 O
ATOM 27 O5' A B1267 19.088 114.772 41.929 1.00 48.44 O
TER
Atoms:
C4: (19.330,112.281,52.670)
N3: (19.456,111.647,51.460)
OP1: (16.045,107.644,57.678)
OP2: (17.172,109.922,57.345)
C2: (18.855,110.478,51.071)
C1': (17.335,108.666,51.632)
C3': (18.032,106.982,53.096)
O5': (16.733,108.394,55.395)
O4': (16.284,108.435,52.555)
C5': (16.042,107.342,54.697)
P: (16.268,108.842,56.854)
C4': (16.541,107.207,53.275)
C2': (18.263,107.450,51.675)
O2': (17.904,106.473,50.711)
N1: (18.040,109.897,52.021)
O4: (19.718,113.445,52.766)
O2: (19.038,109.986,49.954)
C6: (17.900,110.458,53.265)
C5: (18.504,111.592,53.616)
O3': (18.447,105.639,53.268)
N3: (19.456,111.647,51.460)
OP1: (16.045,107.644,57.678)
OP2: (17.172,109.922,57.345)
C2: (18.855,110.478,51.071)
C1': (17.335,108.666,51.632)
C3': (18.032,106.982,53.096)
O5': (16.733,108.394,55.395)
O4': (16.284,108.435,52.555)
C5': (16.042,107.342,54.697)
P: (16.268,108.842,56.854)
C4': (16.541,107.207,53.275)
C2': (18.263,107.450,51.675)
O2': (17.904,106.473,50.711)
N1: (18.040,109.897,52.021)
O4: (19.718,113.445,52.766)
O2: (19.038,109.986,49.954)
C6: (17.900,110.458,53.265)
C5: (18.504,111.592,53.616)
O3': (18.447,105.639,53.268)
OP1: (24.400,119.513,42.630)
OP2: (23.678,119.675,45.078)
C3': (22.159,115.149,43.102)
C1': (23.035,113.909,44.895)
C5': (24.279,116.557,42.874)
O4': (24.091,114.653,44.326)
C8: (22.838,115.860,46.554)
O2': (22.260,112.755,42.969)
C6: (21.110,114.543,49.322)
C5: (21.791,114.924,48.153)
C4: (21.952,113.957,47.182)
P: (24.369,118.936,43.992)
C4': (23.674,115.195,43.051)
C2': (21.944,113.833,43.825)
C2: (20.903,112.449,48.374)
N1: (20.671,113.271,49.402)
N3: (21.526,112.690,47.230)
N6: (20.874,115.365,50.350)
N7: (22.353,116.128,47.744)
N9: (22.631,114.559,46.151)
O5': (23.759,117.472,43.858)
O3': (21.581,115.171,41.791)
OP2: (23.678,119.675,45.078)
C3': (22.159,115.149,43.102)
C1': (23.035,113.909,44.895)
C5': (24.279,116.557,42.874)
O4': (24.091,114.653,44.326)
C8: (22.838,115.860,46.554)
O2': (22.260,112.755,42.969)
C6: (21.110,114.543,49.322)
C5: (21.791,114.924,48.153)
C4: (21.952,113.957,47.182)
P: (24.369,118.936,43.992)
C4': (23.674,115.195,43.051)
C2': (21.944,113.833,43.825)
C2: (20.903,112.449,48.374)
N1: (20.671,113.271,49.402)
N3: (21.526,112.690,47.230)
N6: (20.874,115.365,50.350)
N7: (22.353,116.128,47.744)
N9: (22.631,114.559,46.151)
O5': (23.759,117.472,43.858)
O3': (21.581,115.171,41.791)
Image (generated by PyMOL):