Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8S:A39:A438
Extra
PDB:
ATOM 1 O3' G A 38 -60.392 -79.251 61.664 1.00 0.01 O
ATOM 2 P U A 39 -60.015 -78.476 63.010 1.00 0.01 P
ATOM 3 OP1 U A 39 -61.271 -77.930 63.547 1.00 0.01 O
ATOM 4 OP2 U A 39 -58.914 -77.538 62.695 1.00 0.01 O
ATOM 5 O5' U A 39 -59.510 -79.664 63.937 1.00 0.01 O
ATOM 6 C5' U A 39 -60.369 -80.775 64.151 1.00 0.01 C
ATOM 7 C4' U A 39 -59.709 -81.886 64.910 1.00 0.01 C
ATOM 8 O4' U A 39 -58.763 -82.562 64.061 1.00 0.01 O
ATOM 9 C3' U A 39 -58.894 -81.472 66.107 1.00 0.01 C
ATOM 10 O3' U A 39 -59.685 -81.224 67.250 1.00 0.01 O
ATOM 11 C2' U A 39 -57.929 -82.633 66.263 1.00 0.01 C
ATOM 12 O2' U A 39 -58.580 -83.756 66.840 1.00 0.01 O
ATOM 13 C1' U A 39 -57.638 -82.951 64.809 1.00 0.01 C
ATOM 14 N1 U A 39 -56.468 -82.221 64.283 1.00 0.01 N
ATOM 15 C2 U A 39 -55.224 -82.709 64.570 1.00 0.01 C
ATOM 16 O2 U A 39 -55.049 -83.669 65.299 1.00 0.01 O
ATOM 17 N3 U A 39 -54.204 -82.010 64.008 1.00 0.01 N
ATOM 18 C4 U A 39 -54.316 -80.921 63.204 1.00 0.01 C
ATOM 19 O4 U A 39 -53.291 -80.434 62.791 1.00 0.01 O
ATOM 20 C5 U A 39 -55.628 -80.472 62.927 1.00 0.01 C
ATOM 21 C6 U A 39 -56.640 -81.131 63.466 1.00 0.01 C
ATOM 22 P C A 40 -59.217 -80.123 68.302 1.00 0.01 P
ATOM 23 OP1 C A 40 -60.248 -80.093 69.375 1.00 0.01 O
ATOM 24 OP2 C A 40 -58.923 -78.877 67.544 1.00 0.01 O
ATOM 25 O5' C A 40 -57.867 -80.754 68.856 1.00 0.01 O
TER
ATOM 1 O3' G B 437 -42.787 -83.715 64.756 1.00 0.72 O
ATOM 2 P A B 438 -42.999 -84.489 63.366 1.00 10.71 P
ATOM 3 OP1 A B 438 -41.683 -85.074 62.983 1.00 10.71 O
ATOM 4 OP2 A B 438 -43.650 -83.547 62.415 1.00 10.71 O
ATOM 5 O5' A B 438 -44.032 -85.625 63.792 1.00 10.71 O
ATOM 6 C5' A B 438 -43.902 -86.257 65.055 1.00 10.71 C
ATOM 7 C4' A B 438 -45.230 -86.450 65.745 1.00 10.71 C
ATOM 8 O4' A B 438 -45.826 -85.175 66.041 1.00 10.71 O
ATOM 9 C3' A B 438 -46.314 -87.164 64.962 1.00 10.71 C
ATOM 10 O3' A B 438 -46.135 -88.549 64.889 1.00 10.71 O
ATOM 11 C2' A B 438 -47.562 -86.770 65.712 1.00 10.71 C
ATOM 12 O2' A B 438 -47.711 -87.553 66.880 1.00 10.71 O
ATOM 13 C1' A B 438 -47.231 -85.324 66.093 1.00 10.71 C
ATOM 14 N9 A B 438 -47.815 -84.396 65.144 1.00 10.32 N
ATOM 15 C8 A B 438 -47.235 -83.767 64.096 1.00 10.32 C
ATOM 16 N7 A B 438 -48.082 -83.035 63.426 1.00 10.32 N
ATOM 17 C5 A B 438 -49.284 -83.248 64.084 1.00 10.32 C
ATOM 18 C6 A B 438 -50.581 -82.757 63.867 1.00 10.32 C
ATOM 19 N6 A B 438 -50.896 -81.920 62.883 1.00 10.32 N
ATOM 20 N1 A B 438 -51.537 -83.151 64.726 1.00 10.32 N
ATOM 21 C2 A B 438 -51.186 -83.988 65.722 1.00 10.32 C
ATOM 22 N3 A B 438 -50.004 -84.532 66.032 1.00 10.32 N
ATOM 23 C4 A B 438 -49.112 -84.094 65.151 1.00 10.32 C
ATOM 24 P C B 439 -46.490 -89.285 63.525 1.00 6.35 P
ATOM 25 OP1 C B 439 -45.925 -90.651 63.594 1.00 6.35 O
ATOM 26 OP2 C B 439 -46.045 -88.388 62.415 1.00 6.35 O
ATOM 27 O5' C B 439 -48.074 -89.348 63.588 1.00 6.35 O
TER
ATOM 2 P U A 39 -60.015 -78.476 63.010 1.00 0.01 P
ATOM 3 OP1 U A 39 -61.271 -77.930 63.547 1.00 0.01 O
ATOM 4 OP2 U A 39 -58.914 -77.538 62.695 1.00 0.01 O
ATOM 5 O5' U A 39 -59.510 -79.664 63.937 1.00 0.01 O
ATOM 6 C5' U A 39 -60.369 -80.775 64.151 1.00 0.01 C
ATOM 7 C4' U A 39 -59.709 -81.886 64.910 1.00 0.01 C
ATOM 8 O4' U A 39 -58.763 -82.562 64.061 1.00 0.01 O
ATOM 9 C3' U A 39 -58.894 -81.472 66.107 1.00 0.01 C
ATOM 10 O3' U A 39 -59.685 -81.224 67.250 1.00 0.01 O
ATOM 11 C2' U A 39 -57.929 -82.633 66.263 1.00 0.01 C
ATOM 12 O2' U A 39 -58.580 -83.756 66.840 1.00 0.01 O
ATOM 13 C1' U A 39 -57.638 -82.951 64.809 1.00 0.01 C
ATOM 14 N1 U A 39 -56.468 -82.221 64.283 1.00 0.01 N
ATOM 15 C2 U A 39 -55.224 -82.709 64.570 1.00 0.01 C
ATOM 16 O2 U A 39 -55.049 -83.669 65.299 1.00 0.01 O
ATOM 17 N3 U A 39 -54.204 -82.010 64.008 1.00 0.01 N
ATOM 18 C4 U A 39 -54.316 -80.921 63.204 1.00 0.01 C
ATOM 19 O4 U A 39 -53.291 -80.434 62.791 1.00 0.01 O
ATOM 20 C5 U A 39 -55.628 -80.472 62.927 1.00 0.01 C
ATOM 21 C6 U A 39 -56.640 -81.131 63.466 1.00 0.01 C
ATOM 22 P C A 40 -59.217 -80.123 68.302 1.00 0.01 P
ATOM 23 OP1 C A 40 -60.248 -80.093 69.375 1.00 0.01 O
ATOM 24 OP2 C A 40 -58.923 -78.877 67.544 1.00 0.01 O
ATOM 25 O5' C A 40 -57.867 -80.754 68.856 1.00 0.01 O
TER
ATOM 1 O3' G B 437 -42.787 -83.715 64.756 1.00 0.72 O
ATOM 2 P A B 438 -42.999 -84.489 63.366 1.00 10.71 P
ATOM 3 OP1 A B 438 -41.683 -85.074 62.983 1.00 10.71 O
ATOM 4 OP2 A B 438 -43.650 -83.547 62.415 1.00 10.71 O
ATOM 5 O5' A B 438 -44.032 -85.625 63.792 1.00 10.71 O
ATOM 6 C5' A B 438 -43.902 -86.257 65.055 1.00 10.71 C
ATOM 7 C4' A B 438 -45.230 -86.450 65.745 1.00 10.71 C
ATOM 8 O4' A B 438 -45.826 -85.175 66.041 1.00 10.71 O
ATOM 9 C3' A B 438 -46.314 -87.164 64.962 1.00 10.71 C
ATOM 10 O3' A B 438 -46.135 -88.549 64.889 1.00 10.71 O
ATOM 11 C2' A B 438 -47.562 -86.770 65.712 1.00 10.71 C
ATOM 12 O2' A B 438 -47.711 -87.553 66.880 1.00 10.71 O
ATOM 13 C1' A B 438 -47.231 -85.324 66.093 1.00 10.71 C
ATOM 14 N9 A B 438 -47.815 -84.396 65.144 1.00 10.32 N
ATOM 15 C8 A B 438 -47.235 -83.767 64.096 1.00 10.32 C
ATOM 16 N7 A B 438 -48.082 -83.035 63.426 1.00 10.32 N
ATOM 17 C5 A B 438 -49.284 -83.248 64.084 1.00 10.32 C
ATOM 18 C6 A B 438 -50.581 -82.757 63.867 1.00 10.32 C
ATOM 19 N6 A B 438 -50.896 -81.920 62.883 1.00 10.32 N
ATOM 20 N1 A B 438 -51.537 -83.151 64.726 1.00 10.32 N
ATOM 21 C2 A B 438 -51.186 -83.988 65.722 1.00 10.32 C
ATOM 22 N3 A B 438 -50.004 -84.532 66.032 1.00 10.32 N
ATOM 23 C4 A B 438 -49.112 -84.094 65.151 1.00 10.32 C
ATOM 24 P C B 439 -46.490 -89.285 63.525 1.00 6.35 P
ATOM 25 OP1 C B 439 -45.925 -90.651 63.594 1.00 6.35 O
ATOM 26 OP2 C B 439 -46.045 -88.388 62.415 1.00 6.35 O
ATOM 27 O5' C B 439 -48.074 -89.348 63.588 1.00 6.35 O
TER
Atoms:
C4: (-54.316,-80.921,63.204)
N3: (-54.204,-82.010,64.008)
OP1: (-61.271,-77.930,63.547)
OP2: (-58.914,-77.538,62.695)
C2: (-55.224,-82.709,64.570)
C1': (-57.638,-82.951,64.809)
C3': (-58.894,-81.472,66.107)
O5': (-59.510,-79.664,63.937)
O4': (-58.763,-82.562,64.061)
C5': (-60.369,-80.775,64.151)
P: (-60.015,-78.476,63.010)
C4': (-59.709,-81.886,64.910)
C2': (-57.929,-82.633,66.263)
O2': (-58.580,-83.756,66.840)
N1: (-56.468,-82.221,64.283)
O4: (-53.291,-80.434,62.791)
O2: (-55.049,-83.669,65.299)
C6: (-56.640,-81.131,63.466)
C5: (-55.628,-80.472,62.927)
O3': (-59.685,-81.224,67.250)
N3: (-54.204,-82.010,64.008)
OP1: (-61.271,-77.930,63.547)
OP2: (-58.914,-77.538,62.695)
C2: (-55.224,-82.709,64.570)
C1': (-57.638,-82.951,64.809)
C3': (-58.894,-81.472,66.107)
O5': (-59.510,-79.664,63.937)
O4': (-58.763,-82.562,64.061)
C5': (-60.369,-80.775,64.151)
P: (-60.015,-78.476,63.010)
C4': (-59.709,-81.886,64.910)
C2': (-57.929,-82.633,66.263)
O2': (-58.580,-83.756,66.840)
N1: (-56.468,-82.221,64.283)
O4: (-53.291,-80.434,62.791)
O2: (-55.049,-83.669,65.299)
C6: (-56.640,-81.131,63.466)
C5: (-55.628,-80.472,62.927)
O3': (-59.685,-81.224,67.250)
OP1: (-41.683,-85.074,62.983)
OP2: (-43.650,-83.547,62.415)
C3': (-46.314,-87.164,64.962)
C1': (-47.231,-85.324,66.093)
C5': (-43.902,-86.257,65.055)
O4': (-45.826,-85.175,66.041)
C8: (-47.235,-83.767,64.096)
O2': (-47.711,-87.553,66.880)
C6: (-50.581,-82.757,63.867)
C5: (-49.284,-83.248,64.084)
C4: (-49.112,-84.094,65.151)
P: (-42.999,-84.489,63.366)
C4': (-45.230,-86.450,65.745)
C2': (-47.562,-86.770,65.712)
C2: (-51.186,-83.988,65.722)
N1: (-51.537,-83.151,64.726)
N3: (-50.004,-84.532,66.032)
N6: (-50.896,-81.920,62.883)
N7: (-48.082,-83.035,63.426)
N9: (-47.815,-84.396,65.144)
O5': (-44.032,-85.625,63.792)
O3': (-46.135,-88.549,64.889)
OP2: (-43.650,-83.547,62.415)
C3': (-46.314,-87.164,64.962)
C1': (-47.231,-85.324,66.093)
C5': (-43.902,-86.257,65.055)
O4': (-45.826,-85.175,66.041)
C8: (-47.235,-83.767,64.096)
O2': (-47.711,-87.553,66.880)
C6: (-50.581,-82.757,63.867)
C5: (-49.284,-83.248,64.084)
C4: (-49.112,-84.094,65.151)
P: (-42.999,-84.489,63.366)
C4': (-45.230,-86.450,65.745)
C2': (-47.562,-86.770,65.712)
C2: (-51.186,-83.988,65.722)
N1: (-51.537,-83.151,64.726)
N3: (-50.004,-84.532,66.032)
N6: (-50.896,-81.920,62.883)
N7: (-48.082,-83.035,63.426)
N9: (-47.815,-84.396,65.144)
O5': (-44.032,-85.625,63.792)
O3': (-46.135,-88.549,64.889)
Image (generated by PyMOL):