Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YYW:G9:H2
Extra
PDB:
ATOM 1 O3' A A 8 -15.616 16.843 16.863 1.00 42.49 O
ATOM 2 P U A 9 -14.903 18.271 17.009 1.00 47.70 P
ATOM 3 OP1 U A 9 -13.602 18.223 16.292 1.00 49.29 O
ATOM 4 OP2 U A 9 -14.932 18.606 18.455 1.00 35.48 O
ATOM 5 O5' U A 9 -15.875 19.264 16.229 1.00 41.53 O
ATOM 6 C5' U A 9 -16.134 19.090 14.836 1.00 37.69 C
ATOM 7 C4' U A 9 -17.383 19.841 14.438 1.00 41.68 C
ATOM 8 O4' U A 9 -18.516 19.282 15.149 1.00 40.16 O
ATOM 9 C3' U A 9 -17.396 21.318 14.800 1.00 48.28 C
ATOM 10 O3' U A 9 -16.773 22.093 13.784 1.00 47.41 O
ATOM 11 C2' U A 9 -18.886 21.620 14.906 1.00 45.30 C
ATOM 12 O2' U A 9 -19.501 21.856 13.659 1.00 48.86 O
ATOM 13 C1' U A 9 -19.418 20.317 15.504 1.00 47.19 C
ATOM 14 N1 U A 9 -19.521 20.357 16.969 1.00 48.84 N
ATOM 15 C2 U A 9 -20.618 20.996 17.517 1.00 45.39 C
ATOM 16 O2 U A 9 -21.490 21.514 16.840 1.00 40.93 O
ATOM 17 N3 U A 9 -20.654 21.005 18.889 1.00 39.91 N
ATOM 18 C4 U A 9 -19.726 20.452 19.748 1.00 38.02 C
ATOM 19 O4 U A 9 -19.883 20.566 20.965 1.00 43.05 O
ATOM 20 C5 U A 9 -18.625 19.804 19.102 1.00 34.73 C
ATOM 21 C6 U A 9 -18.561 19.781 17.770 1.00 39.81 C
ATOM 22 P U A 10 -16.115 23.510 14.154 1.00 52.41 P
ATOM 23 OP1 U A 10 -15.398 24.015 12.954 1.00 54.42 O
ATOM 24 OP2 U A 10 -15.378 23.330 15.431 1.00 45.28 O
ATOM 25 O5' U A 10 -17.362 24.466 14.418 1.00 56.11 O
TER
ATOM 1 O3' A B 1 -27.848 26.978 26.187 1.00 42.93 O
ATOM 2 P A B 2 -28.570 25.658 25.624 1.00 44.75 P
ATOM 3 OP1 A B 2 -30.018 25.760 25.946 1.00 48.98 O
ATOM 4 OP2 A B 2 -27.794 24.483 26.093 1.00 26.77 O
ATOM 5 O5' A B 2 -28.400 25.770 24.046 1.00 38.68 O
ATOM 6 C5' A B 2 -29.049 26.803 23.312 1.00 38.36 C
ATOM 7 C4' A B 2 -28.734 26.666 21.843 1.00 45.93 C
ATOM 8 O4' A B 2 -27.306 26.842 21.645 1.00 47.75 O
ATOM 9 C3' A B 2 -29.035 25.300 21.252 1.00 47.20 C
ATOM 10 O3' A B 2 -30.394 25.217 20.839 1.00 54.03 O
ATOM 11 C2' A B 2 -28.076 25.243 20.070 1.00 47.50 C
ATOM 12 O2' A B 2 -28.557 25.957 18.949 1.00 47.33 O
ATOM 13 C1' A B 2 -26.845 25.949 20.645 1.00 42.51 C
ATOM 14 N9 A B 2 -25.876 25.039 21.261 1.00 32.96 N
ATOM 15 C8 A B 2 -25.700 24.776 22.597 1.00 28.41 C
ATOM 16 N7 A B 2 -24.738 23.922 22.847 1.00 24.99 N
ATOM 17 C5 A B 2 -24.248 23.596 21.591 1.00 30.06 C
ATOM 18 C6 A B 2 -23.214 22.738 21.169 1.00 32.85 C
ATOM 19 N6 A B 2 -22.455 22.025 22.003 1.00 28.78 N
ATOM 20 N1 A B 2 -22.983 22.638 19.843 1.00 36.72 N
ATOM 21 C2 A B 2 -23.742 23.356 19.004 1.00 43.49 C
ATOM 22 N3 A B 2 -24.738 24.197 19.278 1.00 42.77 N
ATOM 23 C4 A B 2 -24.943 24.274 20.604 1.00 32.04 C
ATOM 24 P U B 3 -31.141 23.792 20.836 1.00 63.59 P
ATOM 25 OP1 U B 3 -32.543 24.009 20.401 1.00 68.33 O
ATOM 26 OP2 U B 3 -30.871 23.133 22.138 1.00 55.99 O
ATOM 27 O5' U B 3 -30.400 22.969 19.692 1.00 54.50 O
TER
ATOM 2 P U A 9 -14.903 18.271 17.009 1.00 47.70 P
ATOM 3 OP1 U A 9 -13.602 18.223 16.292 1.00 49.29 O
ATOM 4 OP2 U A 9 -14.932 18.606 18.455 1.00 35.48 O
ATOM 5 O5' U A 9 -15.875 19.264 16.229 1.00 41.53 O
ATOM 6 C5' U A 9 -16.134 19.090 14.836 1.00 37.69 C
ATOM 7 C4' U A 9 -17.383 19.841 14.438 1.00 41.68 C
ATOM 8 O4' U A 9 -18.516 19.282 15.149 1.00 40.16 O
ATOM 9 C3' U A 9 -17.396 21.318 14.800 1.00 48.28 C
ATOM 10 O3' U A 9 -16.773 22.093 13.784 1.00 47.41 O
ATOM 11 C2' U A 9 -18.886 21.620 14.906 1.00 45.30 C
ATOM 12 O2' U A 9 -19.501 21.856 13.659 1.00 48.86 O
ATOM 13 C1' U A 9 -19.418 20.317 15.504 1.00 47.19 C
ATOM 14 N1 U A 9 -19.521 20.357 16.969 1.00 48.84 N
ATOM 15 C2 U A 9 -20.618 20.996 17.517 1.00 45.39 C
ATOM 16 O2 U A 9 -21.490 21.514 16.840 1.00 40.93 O
ATOM 17 N3 U A 9 -20.654 21.005 18.889 1.00 39.91 N
ATOM 18 C4 U A 9 -19.726 20.452 19.748 1.00 38.02 C
ATOM 19 O4 U A 9 -19.883 20.566 20.965 1.00 43.05 O
ATOM 20 C5 U A 9 -18.625 19.804 19.102 1.00 34.73 C
ATOM 21 C6 U A 9 -18.561 19.781 17.770 1.00 39.81 C
ATOM 22 P U A 10 -16.115 23.510 14.154 1.00 52.41 P
ATOM 23 OP1 U A 10 -15.398 24.015 12.954 1.00 54.42 O
ATOM 24 OP2 U A 10 -15.378 23.330 15.431 1.00 45.28 O
ATOM 25 O5' U A 10 -17.362 24.466 14.418 1.00 56.11 O
TER
ATOM 1 O3' A B 1 -27.848 26.978 26.187 1.00 42.93 O
ATOM 2 P A B 2 -28.570 25.658 25.624 1.00 44.75 P
ATOM 3 OP1 A B 2 -30.018 25.760 25.946 1.00 48.98 O
ATOM 4 OP2 A B 2 -27.794 24.483 26.093 1.00 26.77 O
ATOM 5 O5' A B 2 -28.400 25.770 24.046 1.00 38.68 O
ATOM 6 C5' A B 2 -29.049 26.803 23.312 1.00 38.36 C
ATOM 7 C4' A B 2 -28.734 26.666 21.843 1.00 45.93 C
ATOM 8 O4' A B 2 -27.306 26.842 21.645 1.00 47.75 O
ATOM 9 C3' A B 2 -29.035 25.300 21.252 1.00 47.20 C
ATOM 10 O3' A B 2 -30.394 25.217 20.839 1.00 54.03 O
ATOM 11 C2' A B 2 -28.076 25.243 20.070 1.00 47.50 C
ATOM 12 O2' A B 2 -28.557 25.957 18.949 1.00 47.33 O
ATOM 13 C1' A B 2 -26.845 25.949 20.645 1.00 42.51 C
ATOM 14 N9 A B 2 -25.876 25.039 21.261 1.00 32.96 N
ATOM 15 C8 A B 2 -25.700 24.776 22.597 1.00 28.41 C
ATOM 16 N7 A B 2 -24.738 23.922 22.847 1.00 24.99 N
ATOM 17 C5 A B 2 -24.248 23.596 21.591 1.00 30.06 C
ATOM 18 C6 A B 2 -23.214 22.738 21.169 1.00 32.85 C
ATOM 19 N6 A B 2 -22.455 22.025 22.003 1.00 28.78 N
ATOM 20 N1 A B 2 -22.983 22.638 19.843 1.00 36.72 N
ATOM 21 C2 A B 2 -23.742 23.356 19.004 1.00 43.49 C
ATOM 22 N3 A B 2 -24.738 24.197 19.278 1.00 42.77 N
ATOM 23 C4 A B 2 -24.943 24.274 20.604 1.00 32.04 C
ATOM 24 P U B 3 -31.141 23.792 20.836 1.00 63.59 P
ATOM 25 OP1 U B 3 -32.543 24.009 20.401 1.00 68.33 O
ATOM 26 OP2 U B 3 -30.871 23.133 22.138 1.00 55.99 O
ATOM 27 O5' U B 3 -30.400 22.969 19.692 1.00 54.50 O
TER
Atoms:
C4: (-19.726,20.452,19.748)
N3: (-20.654,21.005,18.889)
OP1: (-13.602,18.223,16.292)
OP2: (-14.932,18.606,18.455)
C2: (-20.618,20.996,17.517)
C1': (-19.418,20.317,15.504)
C3': (-17.396,21.318,14.800)
O5': (-15.875,19.264,16.229)
O4': (-18.516,19.282,15.149)
C5': (-16.134,19.090,14.836)
P: (-14.903,18.271,17.009)
C4': (-17.383,19.841,14.438)
C2': (-18.886,21.620,14.906)
O2': (-19.501,21.856,13.659)
N1: (-19.521,20.357,16.969)
O4: (-19.883,20.566,20.965)
O2: (-21.490,21.514,16.840)
C6: (-18.561,19.781,17.770)
C5: (-18.625,19.804,19.102)
O3': (-16.773,22.093,13.784)
N3: (-20.654,21.005,18.889)
OP1: (-13.602,18.223,16.292)
OP2: (-14.932,18.606,18.455)
C2: (-20.618,20.996,17.517)
C1': (-19.418,20.317,15.504)
C3': (-17.396,21.318,14.800)
O5': (-15.875,19.264,16.229)
O4': (-18.516,19.282,15.149)
C5': (-16.134,19.090,14.836)
P: (-14.903,18.271,17.009)
C4': (-17.383,19.841,14.438)
C2': (-18.886,21.620,14.906)
O2': (-19.501,21.856,13.659)
N1: (-19.521,20.357,16.969)
O4: (-19.883,20.566,20.965)
O2: (-21.490,21.514,16.840)
C6: (-18.561,19.781,17.770)
C5: (-18.625,19.804,19.102)
O3': (-16.773,22.093,13.784)
OP1: (-30.018,25.760,25.946)
OP2: (-27.794,24.483,26.093)
C3': (-29.035,25.300,21.252)
C1': (-26.845,25.949,20.645)
C5': (-29.049,26.803,23.312)
O4': (-27.306,26.842,21.645)
C8: (-25.700,24.776,22.597)
O2': (-28.557,25.957,18.949)
C6: (-23.214,22.738,21.169)
C5: (-24.248,23.596,21.591)
C4: (-24.943,24.274,20.604)
P: (-28.570,25.658,25.624)
C4': (-28.734,26.666,21.843)
C2': (-28.076,25.243,20.070)
C2: (-23.742,23.356,19.004)
N1: (-22.983,22.638,19.843)
N3: (-24.738,24.197,19.278)
N6: (-22.455,22.025,22.003)
N7: (-24.738,23.922,22.847)
N9: (-25.876,25.039,21.261)
O5': (-28.400,25.770,24.046)
O3': (-30.394,25.217,20.839)
OP2: (-27.794,24.483,26.093)
C3': (-29.035,25.300,21.252)
C1': (-26.845,25.949,20.645)
C5': (-29.049,26.803,23.312)
O4': (-27.306,26.842,21.645)
C8: (-25.700,24.776,22.597)
O2': (-28.557,25.957,18.949)
C6: (-23.214,22.738,21.169)
C5: (-24.248,23.596,21.591)
C4: (-24.943,24.274,20.604)
P: (-28.570,25.658,25.624)
C4': (-28.734,26.666,21.843)
C2': (-28.076,25.243,20.070)
C2: (-23.742,23.356,19.004)
N1: (-22.983,22.638,19.843)
N3: (-24.738,24.197,19.278)
N6: (-22.455,22.025,22.003)
N7: (-24.738,23.922,22.847)
N9: (-25.876,25.039,21.261)
O5': (-28.400,25.770,24.046)
O3': (-30.394,25.217,20.839)
Image (generated by PyMOL):