ClaRNA

Doublet info:

Details

Nucleotide types: UA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3SLM:A14:A28

Extra

PDB:
ATOM 1 O3' G A 13 6.524 1.736 40.792 1.00 26.94 O
ATOM 2 P U A 14 5.069 2.370 40.877 1.00 24.62 P
ATOM 3 OP1 U A 14 4.407 1.760 42.046 1.00 34.27 O
ATOM 4 OP2 U A 14 4.435 2.218 39.539 1.00 21.27 O
ATOM 5 O5' U A 14 5.386 3.909 41.168 1.00 24.62 O
ATOM 6 C5' U A 14 5.959 4.300 42.407 1.00 26.41 C
ATOM 7 C4' U A 14 6.288 5.769 42.438 1.00 24.09 C
ATOM 8 O4' U A 14 7.354 6.061 41.493 1.00 28.29 O
ATOM 9 C3' U A 14 5.175 6.709 42.027 1.00 27.59 C
ATOM 10 O3' U A 14 4.224 6.934 43.055 1.00 27.99 O
ATOM 11 C2' U A 14 5.951 7.954 41.614 1.00 31.24 C
ATOM 12 O2' U A 14 6.442 8.646 42.754 1.00 36.03 O
ATOM 13 C1' U A 14 7.138 7.324 40.902 1.00 23.85 C
ATOM 14 N1 U A 14 6.873 7.131 39.464 1.00 21.26 N
ATOM 15 C2 U A 14 7.074 8.218 38.663 1.00 21.03 C
ATOM 16 O2 U A 14 7.444 9.270 39.123 1.00 23.77 O
ATOM 17 N3 U A 14 6.832 8.045 37.328 1.00 22.22 N
ATOM 18 C4 U A 14 6.400 6.893 36.715 1.00 24.02 C
ATOM 19 O4 U A 14 6.222 6.887 35.494 1.00 22.97 O
ATOM 20 C5 U A 14 6.196 5.797 37.616 1.00 24.49 C
ATOM 21 C6 U A 14 6.430 5.945 38.931 1.00 24.55 C
ATOM 22 P A A 15 2.687 7.218 42.684 1.00 30.80 P
ATOM 23 OP1 A A 15 1.945 7.312 43.961 1.00 33.71 O
ATOM 24 OP2 A A 15 2.266 6.201 41.697 1.00 26.50 O
ATOM 25 O5' A A 15 2.765 8.648 41.993 1.00 26.90 O
TER

ATOM 1 O3' U B 27 7.517 15.882 28.440 1.00 25.89 O
ATOM 2 P A B 28 9.028 15.474 28.803 1.00 32.61 P
ATOM 3 OP1 A B 28 9.899 16.522 28.236 1.00 23.84 O
ATOM 4 OP2 A B 28 9.238 14.063 28.368 1.00 25.59 O
ATOM 5 O5' A B 28 9.037 15.560 30.396 1.00 28.44 O
ATOM 6 C5' A B 28 8.904 16.805 31.070 1.00 23.55 C
ATOM 7 C4' A B 28 9.216 16.659 32.539 1.00 21.65 C
ATOM 8 O4' A B 28 8.088 16.040 33.214 1.00 25.63 O
ATOM 9 C3' A B 28 10.394 15.754 32.879 1.00 19.99 C
ATOM 10 O3' A B 28 11.642 16.412 32.795 1.00 20.50 O
ATOM 11 C2' A B 28 10.054 15.288 34.280 1.00 24.64 C
ATOM 12 O2' A B 28 10.323 16.311 35.220 1.00 26.87 O
ATOM 13 C1' A B 28 8.544 15.114 34.173 1.00 23.15 C
ATOM 14 N9 A B 28 8.180 13.750 33.722 1.00 23.18 N
ATOM 15 C8 A B 28 8.130 13.274 32.433 1.00 22.27 C
ATOM 16 N7 A B 28 7.784 12.009 32.343 1.00 22.84 N
ATOM 17 C5 A B 28 7.597 11.612 33.666 1.00 24.91 C
ATOM 18 C6 A B 28 7.213 10.386 34.263 1.00 25.28 C
ATOM 19 N6 A B 28 6.944 9.253 33.601 1.00 23.83 N
ATOM 20 N1 A B 28 7.110 10.342 35.604 1.00 23.43 N
ATOM 21 C2 A B 28 7.381 11.451 36.291 1.00 23.80 C
ATOM 22 N3 A B 28 7.751 12.647 35.852 1.00 24.28 N
ATOM 23 C4 A B 28 7.845 12.670 34.516 1.00 23.55 C
ATOM 24 P C B 29 13.030 15.577 32.826 1.00 22.99 P
ATOM 25 OP1 C B 29 14.127 16.575 32.834 1.00 25.39 O
ATOM 26 OP2 C B 29 12.983 14.579 31.723 1.00 24.74 O
ATOM 27 O5' C B 29 12.986 14.833 34.223 1.00 17.42 O
TER

Atoms:
C4: (6.400,6.893,36.715)
N3: (6.832,8.045,37.328)
OP1: (4.407,1.760,42.046)
OP2: (4.435,2.218,39.539)
C2: (7.074,8.218,38.663)
C1': (7.138,7.324,40.902)
C3': (5.175,6.709,42.027)
O5': (5.386,3.909,41.168)
O4': (7.354,6.061,41.493)
C5': (5.959,4.300,42.407)
P: (5.069,2.370,40.877)
C4': (6.288,5.769,42.438)
C2': (5.951,7.954,41.614)
O2': (6.442,8.646,42.754)
N1: (6.873,7.131,39.464)
O4: (6.222,6.887,35.494)
O2: (7.444,9.270,39.123)
C6: (6.430,5.945,38.931)
C5: (6.196,5.797,37.616)
O3': (4.224,6.934,43.055)
OP1: (9.899,16.522,28.236)
OP2: (9.238,14.063,28.368)
C3': (10.394,15.754,32.879)
C1': (8.544,15.114,34.173)
C5': (8.904,16.805,31.070)
O4': (8.088,16.040,33.214)
C8: (8.130,13.274,32.433)
O2': (10.323,16.311,35.220)
C6: (7.213,10.386,34.263)
C5: (7.597,11.612,33.666)
C4: (7.845,12.670,34.516)
P: (9.028,15.474,28.803)
C4': (9.216,16.659,32.539)
C2': (10.054,15.288,34.280)
C2: (7.381,11.451,36.291)
N1: (7.110,10.342,35.604)
N3: (7.751,12.647,35.852)
N6: (6.944,9.253,33.601)
N7: (7.784,12.009,32.343)
N9: (8.180,13.750,33.722)
O5': (9.037,15.560,30.396)
O3': (11.642,16.412,32.795)
Image (generated by PyMOL):
PyMOL image
show in jmol