ClaRNA

Doublet info:

Details

Nucleotide types: UA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1S03:B28:B21

Extra

PDB:
ATOM 1 O3' U A 27 30.993 1.994 124.512 1.00 38.87 O
ATOM 2 P U A 28 32.208 2.466 123.561 1.00 26.67 P
ATOM 3 OP1 U A 28 32.301 3.926 123.431 1.00 17.14 O
ATOM 4 OP2 U A 28 32.205 1.607 122.358 1.00 26.46 O
ATOM 5 O5' U A 28 33.417 1.893 124.440 1.00 25.70 O
ATOM 6 C5' U A 28 34.344 2.680 125.171 1.00 25.90 C
ATOM 7 C4' U A 28 35.222 1.751 125.979 1.00 24.93 C
ATOM 8 O4' U A 28 34.432 0.746 126.656 1.00 25.83 O
ATOM 9 C3' U A 28 36.117 0.879 125.121 1.00 26.00 C
ATOM 10 O3' U A 28 37.220 1.605 124.722 1.00 23.55 O
ATOM 11 C2' U A 28 36.517 -0.180 126.128 1.00 26.68 C
ATOM 12 O2' U A 28 37.368 0.350 127.117 1.00 33.89 O
ATOM 13 C1' U A 28 35.183 -0.445 126.769 1.00 22.75 C
ATOM 14 N1 U A 28 34.480 -1.563 126.134 1.00 23.64 N
ATOM 15 C2 U A 28 34.940 -2.848 126.395 1.00 30.71 C
ATOM 16 O2 U A 28 35.898 -3.098 127.118 1.00 34.84 O
ATOM 17 N3 U A 28 34.237 -3.858 125.770 1.00 29.66 N
ATOM 18 C4 U A 28 33.139 -3.694 124.945 1.00 26.78 C
ATOM 19 O4 U A 28 32.616 -4.695 124.512 1.00 21.56 O
ATOM 20 C5 U A 28 32.706 -2.331 124.702 1.00 26.64 C
ATOM 21 C6 U A 28 33.386 -1.334 125.303 1.00 27.39 C
ATOM 22 P C A 29 37.832 1.176 123.333 1.00 31.64 P
ATOM 23 OP1 C A 29 38.705 2.298 122.938 1.00 32.66 O
ATOM 24 OP2 C A 29 36.830 0.652 122.413 1.00 30.09 O
ATOM 25 O5' C A 29 38.676 -0.129 123.736 1.00 33.78 O
TER

ATOM 1 O3' G B 20 36.375 -15.865 126.584 1.00 31.83 O
ATOM 2 P A B 21 35.434 -15.482 127.824 1.00 36.45 P
ATOM 3 OP1 A B 21 35.765 -16.479 128.869 1.00 38.36 O
ATOM 4 OP2 A B 21 34.016 -15.310 127.375 1.00 32.98 O
ATOM 5 O5' A B 21 36.032 -14.073 128.302 1.00 37.61 O
ATOM 6 C5' A B 21 37.327 -14.048 128.884 1.00 42.38 C
ATOM 7 C4' A B 21 37.701 -12.638 129.299 1.00 48.04 C
ATOM 8 O4' A B 21 38.029 -11.887 128.098 1.00 49.78 O
ATOM 9 C3' A B 21 36.644 -11.796 130.029 1.00 52.24 C
ATOM 10 O3' A B 21 36.591 -11.976 131.475 1.00 58.37 O
ATOM 11 C2' A B 21 37.267 -10.449 129.735 1.00 51.97 C
ATOM 12 O2' A B 21 38.408 -10.295 130.569 1.00 57.86 O
ATOM 13 C1' A B 21 37.576 -10.553 128.235 1.00 46.58 C
ATOM 14 N9 A B 21 36.380 -10.207 127.430 1.00 38.95 N
ATOM 15 C8 A B 21 35.367 -11.002 126.919 1.00 37.85 C
ATOM 16 N7 A B 21 34.395 -10.369 126.266 1.00 25.67 N
ATOM 17 C5 A B 21 34.800 -9.057 126.366 1.00 26.12 C
ATOM 18 C6 A B 21 34.221 -7.864 125.900 1.00 26.00 C
ATOM 19 N6 A B 21 33.069 -7.815 125.224 1.00 16.20 N
ATOM 20 N1 A B 21 34.864 -6.708 126.182 1.00 31.27 N
ATOM 21 C2 A B 21 36.004 -6.739 126.893 1.00 31.94 C
ATOM 22 N3 A B 21 36.647 -7.793 127.381 1.00 32.72 N
ATOM 23 C4 A B 21 35.992 -8.932 127.080 1.00 32.57 C
ATOM 24 P G B 22 35.322 -11.532 132.385 1.00 63.79 P
ATOM 25 OP1 G B 22 35.677 -11.802 133.794 1.00 65.79 O
ATOM 26 OP2 G B 22 34.092 -12.193 131.874 1.00 62.82 O
ATOM 27 O5' G B 22 35.201 -9.927 132.239 1.00 65.56 O
TER

Atoms:
C4: (33.139,-3.694,124.945)
N3: (34.237,-3.858,125.770)
OP1: (32.301,3.926,123.431)
OP2: (32.205,1.607,122.358)
C2: (34.940,-2.848,126.395)
C1': (35.183,-0.445,126.769)
C3': (36.117,0.879,125.121)
O5': (33.417,1.893,124.440)
O4': (34.432,0.746,126.656)
C5': (34.344,2.680,125.171)
P: (32.208,2.466,123.561)
C4': (35.222,1.751,125.979)
C2': (36.517,-0.180,126.128)
O2': (37.368,0.350,127.117)
N1: (34.480,-1.563,126.134)
O4: (32.616,-4.695,124.512)
O2: (35.898,-3.098,127.118)
C6: (33.386,-1.334,125.303)
C5: (32.706,-2.331,124.702)
O3': (37.220,1.605,124.722)
OP1: (35.765,-16.479,128.869)
OP2: (34.016,-15.310,127.375)
C3': (36.644,-11.796,130.029)
C1': (37.576,-10.553,128.235)
C5': (37.327,-14.048,128.884)
O4': (38.029,-11.887,128.098)
C8: (35.367,-11.002,126.919)
O2': (38.408,-10.295,130.569)
C6: (34.221,-7.864,125.900)
C5: (34.800,-9.057,126.366)
C4: (35.992,-8.932,127.080)
P: (35.434,-15.482,127.824)
C4': (37.701,-12.638,129.299)
C2': (37.267,-10.449,129.735)
C2: (36.004,-6.739,126.893)
N1: (34.864,-6.708,126.182)
N3: (36.647,-7.793,127.381)
N6: (33.069,-7.815,125.224)
N7: (34.395,-10.369,126.266)
N9: (36.380,-10.207,127.430)
O5': (36.032,-14.073,128.302)
O3': (36.591,-11.976,131.475)
Image (generated by PyMOL):
PyMOL image
show in jmol