ClaRNA

Doublet info:

Details

Nucleotide types: UA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2OTL:02022:02006

Extra

PDB:
ATOM 1 O3' G A2021 40.594 124.901 107.438 1.00 33.98 O
ATOM 2 P U A2022 40.472 123.387 106.938 1.00 35.44 P
ATOM 3 OP1 U A2022 40.106 122.602 108.122 1.00 36.83 O
ATOM 4 OP2 U A2022 41.673 123.028 106.168 1.00 36.88 O
ATOM 5 O5' U A2022 39.240 123.388 105.936 1.00 35.29 O
ATOM 6 C5' U A2022 37.990 123.970 106.313 1.00 35.57 C
ATOM 7 C4' U A2022 36.987 123.798 105.206 1.00 37.35 C
ATOM 8 O4' U A2022 37.359 124.627 104.071 1.00 37.73 O
ATOM 9 C3' U A2022 36.856 122.381 104.668 1.00 38.56 C
ATOM 10 O3' U A2022 35.509 122.119 104.348 1.00 37.68 O
ATOM 11 C2' U A2022 37.693 122.415 103.397 1.00 38.48 C
ATOM 12 O2' U A2022 37.284 121.461 102.433 1.00 39.36 O
ATOM 13 C1' U A2022 37.431 123.832 102.910 1.00 36.18 C
ATOM 14 N1 U A2022 38.533 124.324 102.082 1.00 35.78 N
ATOM 15 C2 U A2022 38.262 124.624 100.765 1.00 34.54 C
ATOM 16 O2 U A2022 37.154 124.550 100.285 1.00 32.50 O
ATOM 17 N3 U A2022 39.346 125.020 100.030 1.00 34.58 N
ATOM 18 C4 U A2022 40.639 125.150 100.473 1.00 34.05 C
ATOM 19 O4 U A2022 41.519 125.394 99.662 1.00 38.42 O
ATOM 20 C5 U A2022 40.835 124.856 101.856 1.00 34.11 C
ATOM 21 C6 U A2022 39.800 124.462 102.597 1.00 35.46 C
ATOM 22 P C A2023 34.656 121.188 105.319 1.00 38.63 P
ATOM 23 OP1 C A2023 33.286 121.128 104.768 1.00 37.86 O
ATOM 24 OP2 C A2023 34.880 121.684 106.694 1.00 35.87 O
ATOM 25 O5' C A2023 35.326 119.754 105.189 1.00 34.75 O
TER

ATOM 1 O3' U B2005 39.485 129.711 89.239 1.00 33.02 O
ATOM 2 P A B2006 39.129 130.856 90.300 1.00 34.59 P
ATOM 3 OP1 A B2006 38.615 132.004 89.528 1.00 34.93 O
ATOM 4 OP2 A B2006 40.283 131.044 91.206 1.00 33.19 O
ATOM 5 O5' A B2006 37.936 130.227 91.145 1.00 33.97 O
ATOM 6 C5' A B2006 36.733 129.794 90.506 1.00 32.54 C
ATOM 7 C4' A B2006 35.899 128.983 91.462 1.00 33.54 C
ATOM 8 O4' A B2006 36.576 127.739 91.782 1.00 36.09 O
ATOM 9 C3' A B2006 35.628 129.613 92.816 1.00 33.29 C
ATOM 10 O3' A B2006 34.542 130.520 92.742 1.00 33.11 O
ATOM 11 C2' A B2006 35.266 128.392 93.640 1.00 35.18 C
ATOM 12 O2' A B2006 33.972 127.951 93.300 1.00 37.05 O
ATOM 13 C1' A B2006 36.278 127.369 93.120 1.00 35.71 C
ATOM 14 N9 A B2006 37.531 127.374 93.878 1.00 36.24 N
ATOM 15 C8 A B2006 38.705 127.995 93.536 1.00 36.42 C
ATOM 16 N7 A B2006 39.665 127.829 94.408 1.00 35.70 N
ATOM 17 C5 A B2006 39.088 127.044 95.392 1.00 36.38 C
ATOM 18 C6 A B2006 39.593 126.504 96.586 1.00 36.36 C
ATOM 19 N6 A B2006 40.843 126.684 97.008 1.00 36.36 N
ATOM 20 N1 A B2006 38.762 125.759 97.339 1.00 35.06 N
ATOM 21 C2 A B2006 37.516 125.571 96.912 1.00 37.61 C
ATOM 22 N3 A B2006 36.922 126.021 95.809 1.00 38.55 N
ATOM 23 C4 A B2006 37.773 126.759 95.081 1.00 36.98 C
ATOM 24 P C B2007 34.492 131.800 93.712 1.00 33.89 P
ATOM 25 OP1 C B2007 33.303 132.588 93.316 1.00 32.17 O
ATOM 26 OP2 C B2007 35.808 132.452 93.775 1.00 32.36 O
ATOM 27 O5' C B2007 34.202 131.182 95.143 1.00 34.60 O
TER

Atoms:
C4: (40.639,125.150,100.473)
N3: (39.346,125.020,100.030)
OP1: (40.106,122.602,108.122)
OP2: (41.673,123.028,106.168)
C2: (38.262,124.624,100.765)
C1': (37.431,123.832,102.910)
C3': (36.856,122.381,104.668)
O5': (39.240,123.388,105.936)
O4': (37.359,124.627,104.071)
C5': (37.990,123.970,106.313)
P: (40.472,123.387,106.938)
C4': (36.987,123.798,105.206)
C2': (37.693,122.415,103.397)
O2': (37.284,121.461,102.433)
N1: (38.533,124.324,102.082)
O4: (41.519,125.394,99.662)
O2: (37.154,124.550,100.285)
C6: (39.800,124.462,102.597)
C5: (40.835,124.856,101.856)
O3': (35.509,122.119,104.348)
OP1: (38.615,132.004,89.528)
OP2: (40.283,131.044,91.206)
C3': (35.628,129.613,92.816)
C1': (36.278,127.369,93.120)
C5': (36.733,129.794,90.506)
O4': (36.576,127.739,91.782)
C8: (38.705,127.995,93.536)
O2': (33.972,127.951,93.300)
C6: (39.593,126.504,96.586)
C5: (39.088,127.044,95.392)
C4: (37.773,126.759,95.081)
P: (39.129,130.856,90.300)
C4': (35.899,128.983,91.462)
C2': (35.266,128.392,93.640)
C2: (37.516,125.571,96.912)
N1: (38.762,125.759,97.339)
N3: (36.922,126.021,95.809)
N6: (40.843,126.684,97.008)
N7: (39.665,127.829,94.408)
N9: (37.531,127.374,93.878)
O5': (37.936,130.227,91.145)
O3': (34.542,130.520,92.742)
Image (generated by PyMOL):
PyMOL image
show in jmol