Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1M5V:B86:A4
Extra
PDB:
ATOM 1 O3' G A 85 106.343 37.087 31.131 1.00136.20 O
ATOM 2 P U A 86 107.170 37.903 32.243 1.00134.90 P
ATOM 3 OP1 U A 86 108.263 38.638 31.559 1.00135.73 O
ATOM 4 OP2 U A 86 107.496 36.959 33.342 1.00129.15 O
ATOM 5 O5' U A 86 106.125 38.965 32.808 1.00136.87 O
ATOM 6 C5' U A 86 105.690 40.063 32.010 1.00139.59 C
ATOM 7 C4' U A 86 104.756 40.949 32.802 1.00140.85 C
ATOM 8 O4' U A 86 103.570 40.189 33.161 1.00140.62 O
ATOM 9 C3' U A 86 105.290 41.443 34.137 1.00143.15 C
ATOM 10 O3' U A 86 106.106 42.598 33.991 1.00145.28 O
ATOM 11 C2' U A 86 104.005 41.748 34.893 1.00141.51 C
ATOM 12 O2' U A 86 103.415 42.969 34.496 1.00139.90 O
ATOM 13 C1' U A 86 103.123 40.580 34.452 1.00139.89 C
ATOM 14 N1 U A 86 103.245 39.424 35.352 1.00138.20 N
ATOM 15 C2 U A 86 102.396 39.367 36.440 1.00137.40 C
ATOM 16 O2 U A 86 101.560 40.223 36.670 1.00137.33 O
ATOM 17 N3 U A 86 102.563 38.269 37.249 1.00136.75 N
ATOM 18 C4 U A 86 103.474 37.245 37.083 1.00136.64 C
ATOM 19 O4 U A 86 103.502 36.321 37.897 1.00135.46 O
ATOM 20 C5 U A 86 104.315 37.377 35.934 1.00137.18 C
ATOM 21 C6 U A 86 104.176 38.435 35.128 1.00137.94 C
ATOM 22 P G A 87 107.265 42.889 35.066 1.00146.25 P
ATOM 23 OP1 G A 87 108.125 43.976 34.532 1.00147.14 O
ATOM 24 OP2 G A 87 107.872 41.582 35.425 1.00145.32 O
ATOM 25 O5' G A 87 106.486 43.444 36.342 1.00146.95 O
TER
ATOM 1 O3' C B 3 95.016 36.808 46.961 1.00161.56 O
ATOM 2 P A B 4 94.282 36.457 45.576 1.00160.93 P
ATOM 3 OP1 A B 4 92.818 36.408 45.823 1.00162.02 O
ATOM 4 OP2 A B 4 94.969 35.274 44.996 1.00159.00 O
ATOM 5 O5' A B 4 94.595 37.717 44.651 1.00157.44 O
ATOM 6 C5' A B 4 94.097 39.010 44.987 1.00150.77 C
ATOM 7 C4' A B 4 94.616 40.042 44.014 1.00145.04 C
ATOM 8 O4' A B 4 96.059 40.142 44.134 1.00143.45 O
ATOM 9 C3' A B 4 94.386 39.731 42.545 1.00142.21 C
ATOM 10 O3' A B 4 93.085 40.135 42.138 1.00139.86 O
ATOM 11 C2' A B 4 95.469 40.562 41.869 1.00140.85 C
ATOM 12 O2' A B 4 95.113 41.923 41.743 1.00140.54 O
ATOM 13 C1' A B 4 96.625 40.416 42.862 1.00140.47 C
ATOM 14 N9 A B 4 97.534 39.324 42.519 1.00137.88 N
ATOM 15 C8 A B 4 97.694 38.123 43.166 1.00137.21 C
ATOM 16 N7 A B 4 98.590 37.341 42.613 1.00136.10 N
ATOM 17 C5 A B 4 99.051 38.076 41.531 1.00135.97 C
ATOM 18 C6 A B 4 100.011 37.802 40.542 1.00135.75 C
ATOM 19 N6 A B 4 100.708 36.666 40.480 1.00135.87 N
ATOM 20 N1 A B 4 100.233 38.749 39.604 1.00135.73 N
ATOM 21 C2 A B 4 99.534 39.888 39.665 1.00135.92 C
ATOM 22 N3 A B 4 98.607 40.261 40.544 1.00136.44 N
ATOM 23 C4 A B 4 98.410 39.299 41.461 1.00136.77 C
ATOM 24 P C B 5 92.268 39.237 41.086 1.00140.67 P
ATOM 25 OP1 C B 5 90.874 39.747 41.031 1.00142.16 O
ATOM 26 OP2 C B 5 92.515 37.812 41.425 1.00137.95 O
ATOM 27 O5' C B 5 92.971 39.542 39.691 1.00137.67 O
TER
ATOM 2 P U A 86 107.170 37.903 32.243 1.00134.90 P
ATOM 3 OP1 U A 86 108.263 38.638 31.559 1.00135.73 O
ATOM 4 OP2 U A 86 107.496 36.959 33.342 1.00129.15 O
ATOM 5 O5' U A 86 106.125 38.965 32.808 1.00136.87 O
ATOM 6 C5' U A 86 105.690 40.063 32.010 1.00139.59 C
ATOM 7 C4' U A 86 104.756 40.949 32.802 1.00140.85 C
ATOM 8 O4' U A 86 103.570 40.189 33.161 1.00140.62 O
ATOM 9 C3' U A 86 105.290 41.443 34.137 1.00143.15 C
ATOM 10 O3' U A 86 106.106 42.598 33.991 1.00145.28 O
ATOM 11 C2' U A 86 104.005 41.748 34.893 1.00141.51 C
ATOM 12 O2' U A 86 103.415 42.969 34.496 1.00139.90 O
ATOM 13 C1' U A 86 103.123 40.580 34.452 1.00139.89 C
ATOM 14 N1 U A 86 103.245 39.424 35.352 1.00138.20 N
ATOM 15 C2 U A 86 102.396 39.367 36.440 1.00137.40 C
ATOM 16 O2 U A 86 101.560 40.223 36.670 1.00137.33 O
ATOM 17 N3 U A 86 102.563 38.269 37.249 1.00136.75 N
ATOM 18 C4 U A 86 103.474 37.245 37.083 1.00136.64 C
ATOM 19 O4 U A 86 103.502 36.321 37.897 1.00135.46 O
ATOM 20 C5 U A 86 104.315 37.377 35.934 1.00137.18 C
ATOM 21 C6 U A 86 104.176 38.435 35.128 1.00137.94 C
ATOM 22 P G A 87 107.265 42.889 35.066 1.00146.25 P
ATOM 23 OP1 G A 87 108.125 43.976 34.532 1.00147.14 O
ATOM 24 OP2 G A 87 107.872 41.582 35.425 1.00145.32 O
ATOM 25 O5' G A 87 106.486 43.444 36.342 1.00146.95 O
TER
ATOM 1 O3' C B 3 95.016 36.808 46.961 1.00161.56 O
ATOM 2 P A B 4 94.282 36.457 45.576 1.00160.93 P
ATOM 3 OP1 A B 4 92.818 36.408 45.823 1.00162.02 O
ATOM 4 OP2 A B 4 94.969 35.274 44.996 1.00159.00 O
ATOM 5 O5' A B 4 94.595 37.717 44.651 1.00157.44 O
ATOM 6 C5' A B 4 94.097 39.010 44.987 1.00150.77 C
ATOM 7 C4' A B 4 94.616 40.042 44.014 1.00145.04 C
ATOM 8 O4' A B 4 96.059 40.142 44.134 1.00143.45 O
ATOM 9 C3' A B 4 94.386 39.731 42.545 1.00142.21 C
ATOM 10 O3' A B 4 93.085 40.135 42.138 1.00139.86 O
ATOM 11 C2' A B 4 95.469 40.562 41.869 1.00140.85 C
ATOM 12 O2' A B 4 95.113 41.923 41.743 1.00140.54 O
ATOM 13 C1' A B 4 96.625 40.416 42.862 1.00140.47 C
ATOM 14 N9 A B 4 97.534 39.324 42.519 1.00137.88 N
ATOM 15 C8 A B 4 97.694 38.123 43.166 1.00137.21 C
ATOM 16 N7 A B 4 98.590 37.341 42.613 1.00136.10 N
ATOM 17 C5 A B 4 99.051 38.076 41.531 1.00135.97 C
ATOM 18 C6 A B 4 100.011 37.802 40.542 1.00135.75 C
ATOM 19 N6 A B 4 100.708 36.666 40.480 1.00135.87 N
ATOM 20 N1 A B 4 100.233 38.749 39.604 1.00135.73 N
ATOM 21 C2 A B 4 99.534 39.888 39.665 1.00135.92 C
ATOM 22 N3 A B 4 98.607 40.261 40.544 1.00136.44 N
ATOM 23 C4 A B 4 98.410 39.299 41.461 1.00136.77 C
ATOM 24 P C B 5 92.268 39.237 41.086 1.00140.67 P
ATOM 25 OP1 C B 5 90.874 39.747 41.031 1.00142.16 O
ATOM 26 OP2 C B 5 92.515 37.812 41.425 1.00137.95 O
ATOM 27 O5' C B 5 92.971 39.542 39.691 1.00137.67 O
TER
Atoms:
C4: (103.474,37.245,37.083)
N3: (102.563,38.269,37.249)
OP1: (108.263,38.638,31.559)
OP2: (107.496,36.959,33.342)
C2: (102.396,39.367,36.440)
C1': (103.123,40.580,34.452)
C3': (105.290,41.443,34.137)
O5': (106.125,38.965,32.808)
O4': (103.570,40.189,33.161)
C5': (105.690,40.063,32.010)
P: (107.170,37.903,32.243)
C4': (104.756,40.949,32.802)
C2': (104.005,41.748,34.893)
O2': (103.415,42.969,34.496)
N1: (103.245,39.424,35.352)
O4: (103.502,36.321,37.897)
O2: (101.560,40.223,36.670)
C6: (104.176,38.435,35.128)
C5: (104.315,37.377,35.934)
O3': (106.106,42.598,33.991)
N3: (102.563,38.269,37.249)
OP1: (108.263,38.638,31.559)
OP2: (107.496,36.959,33.342)
C2: (102.396,39.367,36.440)
C1': (103.123,40.580,34.452)
C3': (105.290,41.443,34.137)
O5': (106.125,38.965,32.808)
O4': (103.570,40.189,33.161)
C5': (105.690,40.063,32.010)
P: (107.170,37.903,32.243)
C4': (104.756,40.949,32.802)
C2': (104.005,41.748,34.893)
O2': (103.415,42.969,34.496)
N1: (103.245,39.424,35.352)
O4: (103.502,36.321,37.897)
O2: (101.560,40.223,36.670)
C6: (104.176,38.435,35.128)
C5: (104.315,37.377,35.934)
O3': (106.106,42.598,33.991)
OP1: (92.818,36.408,45.823)
OP2: (94.969,35.274,44.996)
C3': (94.386,39.731,42.545)
C1': (96.625,40.416,42.862)
C5': (94.097,39.010,44.987)
O4': (96.059,40.142,44.134)
C8: (97.694,38.123,43.166)
O2': (95.113,41.923,41.743)
C6: (100.011,37.802,40.542)
C5: (99.051,38.076,41.531)
C4: (98.410,39.299,41.461)
P: (94.282,36.457,45.576)
C4': (94.616,40.042,44.014)
C2': (95.469,40.562,41.869)
C2: (99.534,39.888,39.665)
N1: (100.233,38.749,39.604)
N3: (98.607,40.261,40.544)
N6: (100.708,36.666,40.480)
N7: (98.590,37.341,42.613)
N9: (97.534,39.324,42.519)
O5': (94.595,37.717,44.651)
O3': (93.085,40.135,42.138)
OP2: (94.969,35.274,44.996)
C3': (94.386,39.731,42.545)
C1': (96.625,40.416,42.862)
C5': (94.097,39.010,44.987)
O4': (96.059,40.142,44.134)
C8: (97.694,38.123,43.166)
O2': (95.113,41.923,41.743)
C6: (100.011,37.802,40.542)
C5: (99.051,38.076,41.531)
C4: (98.410,39.299,41.461)
P: (94.282,36.457,45.576)
C4': (94.616,40.042,44.014)
C2': (95.469,40.562,41.869)
C2: (99.534,39.888,39.665)
N1: (100.233,38.749,39.604)
N3: (98.607,40.261,40.544)
N6: (100.708,36.666,40.480)
N7: (98.590,37.341,42.613)
N9: (97.534,39.324,42.519)
O5': (94.595,37.717,44.651)
O3': (93.085,40.135,42.138)
Image (generated by PyMOL):