ClaRNA

Doublet info:

Details

Nucleotide types: UA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 157D:B6:A5

Extra

PDB:
ATOM 1 O3' A A 5 13.300 5.498 8.183 1.00 42.21 O
ATOM 2 P U A 6 11.728 5.910 8.379 1.00 35.29 P
ATOM 3 OP1 U A 6 11.779 6.637 9.655 1.00 42.32 O
ATOM 4 OP2 U A 6 10.925 4.636 8.476 1.00 29.97 O
ATOM 5 O5' U A 6 11.385 6.720 7.063 1.00 19.34 O
ATOM 6 C5' U A 6 11.366 8.146 7.060 1.00 8.26 C
ATOM 7 C4' U A 6 10.839 8.658 5.728 1.00 24.09 C
ATOM 8 O4' U A 6 11.251 7.727 4.753 1.00 27.78 O
ATOM 9 C3' U A 6 9.345 8.735 5.560 1.00 28.04 C
ATOM 10 O3' U A 6 8.536 9.593 6.385 1.00 36.38 O
ATOM 11 C2' U A 6 9.178 8.645 4.057 1.00 29.08 C
ATOM 12 O2' U A 6 9.179 9.967 3.556 1.00 30.24 O
ATOM 13 C1' U A 6 10.348 7.817 3.622 1.00 30.75 C
ATOM 14 N1 U A 6 10.032 6.429 3.255 1.00 23.96 N
ATOM 15 C2 U A 6 9.585 6.207 1.954 1.00 30.81 C
ATOM 16 O2 U A 6 9.460 7.139 1.156 1.00 33.24 O
ATOM 17 N3 U A 6 9.306 4.926 1.587 1.00 24.87 N
ATOM 18 C4 U A 6 9.446 3.874 2.445 1.00 24.63 C
ATOM 19 O4 U A 6 9.170 2.732 1.989 1.00 25.77 O
ATOM 20 C5 U A 6 9.892 4.113 3.769 1.00 20.52 C
ATOM 21 C6 U A 6 10.190 5.387 4.116 1.00 22.02 C
ATOM 22 P U A 7 7.102 9.209 7.073 1.00 25.88 P
ATOM 23 OP1 U A 7 6.848 10.286 8.025 1.00 34.98 O
ATOM 24 OP2 U A 7 7.238 7.900 7.753 1.00 29.59 O
ATOM 25 O5' U A 7 6.140 9.237 5.797 1.00 29.23 O
TER

ATOM 1 O3' A B 4 5.014 0.294 -7.371 1.00 27.26 O
ATOM 2 P A B 5 6.491 0.595 -7.918 1.00 27.74 P
ATOM 3 OP1 A B 5 6.426 0.159 -9.337 1.00 33.08 O
ATOM 4 OP2 A B 5 7.552 -0.128 -7.175 1.00 36.99 O
ATOM 5 O5' A B 5 6.596 2.171 -7.705 1.00 23.28 O
ATOM 6 C5' A B 5 5.503 3.026 -8.041 1.00 18.64 C
ATOM 7 C4' A B 5 5.650 4.286 -7.251 1.00 16.49 C
ATOM 8 O4' A B 5 5.265 4.044 -5.939 1.00 19.63 O
ATOM 9 C3' A B 5 7.003 4.940 -7.165 1.00 30.21 C
ATOM 10 O3' A B 5 7.480 5.719 -8.234 1.00 38.72 O
ATOM 11 C2' A B 5 6.933 5.719 -5.873 1.00 28.19 C
ATOM 12 O2' A B 5 6.282 6.948 -6.108 1.00 35.42 O
ATOM 13 C1' A B 5 6.073 4.823 -5.035 1.00 17.52 C
ATOM 14 N9 A B 5 6.864 3.919 -4.195 1.00 23.11 N
ATOM 15 C8 A B 5 7.289 2.631 -4.422 1.00 20.94 C
ATOM 16 N7 A B 5 7.917 2.112 -3.408 1.00 18.65 N
ATOM 17 C5 A B 5 7.907 3.116 -2.448 1.00 10.82 C
ATOM 18 C6 A B 5 8.447 3.154 -1.131 1.00 20.44 C
ATOM 19 N6 A B 5 9.088 2.150 -0.560 1.00 21.07 N
ATOM 20 N1 A B 5 8.273 4.338 -0.486 1.00 20.04 N
ATOM 21 C2 A B 5 7.635 5.387 -1.077 1.00 20.07 C
ATOM 22 N3 A B 5 7.088 5.411 -2.282 1.00 19.12 N
ATOM 23 C4 A B 5 7.273 4.231 -2.914 1.00 18.63 C
ATOM 24 P U B 6 9.039 5.577 -8.647 1.00 36.47 P
ATOM 25 OP1 U B 6 8.980 5.955 -10.088 1.00 52.63 O
ATOM 26 OP2 U B 6 9.538 4.172 -8.489 1.00 41.18 O
ATOM 27 O5' U B 6 9.769 6.536 -7.646 1.00 19.69 O
TER

Atoms:
C4: (9.446,3.874,2.445)
N3: (9.306,4.926,1.587)
OP1: (11.779,6.637,9.655)
OP2: (10.925,4.636,8.476)
C2: (9.585,6.207,1.954)
C1': (10.348,7.817,3.622)
C3': (9.345,8.735,5.560)
O5': (11.385,6.720,7.063)
O4': (11.251,7.727,4.753)
C5': (11.366,8.146,7.060)
P: (11.728,5.910,8.379)
C4': (10.839,8.658,5.728)
C2': (9.178,8.645,4.057)
O2': (9.179,9.967,3.556)
N1: (10.032,6.429,3.255)
O4: (9.170,2.732,1.989)
O2: (9.460,7.139,1.156)
C6: (10.190,5.387,4.116)
C5: (9.892,4.113,3.769)
O3': (8.536,9.593,6.385)
OP1: (6.426,0.159,-9.337)
OP2: (7.552,-0.128,-7.175)
C3': (7.003,4.940,-7.165)
C1': (6.073,4.823,-5.035)
C5': (5.503,3.026,-8.041)
O4': (5.265,4.044,-5.939)
C8: (7.289,2.631,-4.422)
O2': (6.282,6.948,-6.108)
C6: (8.447,3.154,-1.131)
C5: (7.907,3.116,-2.448)
C4: (7.273,4.231,-2.914)
P: (6.491,0.595,-7.918)
C4': (5.650,4.286,-7.251)
C2': (6.933,5.719,-5.873)
C2: (7.635,5.387,-1.077)
N1: (8.273,4.338,-0.486)
N3: (7.088,5.411,-2.282)
N6: (9.088,2.150,-0.560)
N7: (7.917,2.112,-3.408)
N9: (6.864,3.919,-4.195)
O5': (6.596,2.171,-7.705)
O3': (7.480,5.719,-8.234)
Image (generated by PyMOL):
PyMOL image
show in jmol