Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJW:01241:01233
Extra
PDB:
ATOM 1 O3' C A1240 2.169 96.907 69.711 1.00 72.42 O
ATOM 2 P U A1241 2.140 96.537 71.260 1.00 72.26 P
ATOM 3 OP1 U A1241 1.208 97.499 71.894 1.00 73.33 O
ATOM 4 OP2 U A1241 3.543 96.444 71.738 1.00 71.99 O
ATOM 5 O5' U A1241 1.489 95.080 71.278 1.00 71.37 O
ATOM 6 C5' U A1241 0.122 94.873 70.847 1.00 68.77 C
ATOM 7 C4' U A1241 -0.251 93.411 70.943 1.00 65.29 C
ATOM 8 O4' U A1241 0.409 92.655 69.894 1.00 64.41 O
ATOM 9 C3' U A1241 0.179 92.717 72.220 1.00 64.48 C
ATOM 10 O3' U A1241 -0.685 93.002 73.314 1.00 63.72 O
ATOM 11 C2' U A1241 0.196 91.257 71.794 1.00 63.62 C
ATOM 12 O2' U A1241 -1.091 90.688 71.709 1.00 64.65 O
ATOM 13 C1' U A1241 0.774 91.374 70.384 1.00 63.12 C
ATOM 14 N1 U A1241 2.242 91.279 70.381 1.00 63.21 N
ATOM 15 C2 U A1241 2.820 90.026 70.221 1.00 63.31 C
ATOM 16 O2 U A1241 2.173 89.003 70.056 1.00 63.66 O
ATOM 17 N3 U A1241 4.190 90.015 70.258 1.00 62.89 N
ATOM 18 C4 U A1241 5.027 91.096 70.430 1.00 62.72 C
ATOM 19 O4 U A1241 6.244 90.918 70.467 1.00 64.00 O
ATOM 20 C5 U A1241 4.360 92.350 70.573 1.00 62.39 C
ATOM 21 C6 U A1241 3.028 92.400 70.544 1.00 62.50 C
ATOM 22 P G A1242 -0.083 93.052 74.808 1.00 62.70 P
ATOM 23 OP1 G A1242 -1.157 93.577 75.683 1.00 61.76 O
ATOM 24 OP2 G A1242 1.236 93.735 74.780 1.00 62.32 O
ATOM 25 O5' G A1242 0.152 91.513 75.159 1.00 60.77 O
TER
ATOM 1 O3' C B1232 10.186 79.493 71.131 1.00 47.46 O
ATOM 2 P A B1233 9.672 79.584 69.615 1.00 47.74 P
ATOM 3 OP1 A B1233 9.580 78.179 69.159 1.00 49.00 O
ATOM 4 OP2 A B1233 10.491 80.544 68.845 1.00 47.41 O
ATOM 5 O5' A B1233 8.207 80.196 69.749 1.00 45.75 O
ATOM 6 C5' A B1233 7.139 79.417 70.307 1.00 43.99 C
ATOM 7 C4' A B1233 5.835 80.172 70.234 1.00 44.52 C
ATOM 8 O4' A B1233 5.876 81.319 71.118 1.00 45.60 O
ATOM 9 C3' A B1233 5.477 80.787 68.898 1.00 45.57 C
ATOM 10 O3' A B1233 5.006 79.839 67.960 1.00 47.22 O
ATOM 11 C2' A B1233 4.441 81.828 69.300 1.00 45.90 C
ATOM 12 O2' A B1233 3.167 81.294 69.602 1.00 45.03 O
ATOM 13 C1' A B1233 5.058 82.357 70.592 1.00 45.79 C
ATOM 14 N9 A B1233 5.885 83.545 70.369 1.00 46.43 N
ATOM 15 C8 A B1233 7.235 83.623 70.109 1.00 46.36 C
ATOM 16 N7 A B1233 7.673 84.848 69.951 1.00 46.08 N
ATOM 17 C5 A B1233 6.537 85.631 70.118 1.00 46.34 C
ATOM 18 C6 A B1233 6.328 87.020 70.070 1.00 46.09 C
ATOM 19 N6 A B1233 7.292 87.907 69.820 1.00 46.43 N
ATOM 20 N1 A B1233 5.075 87.473 70.284 1.00 45.88 N
ATOM 21 C2 A B1233 4.104 86.586 70.524 1.00 45.64 C
ATOM 22 N3 A B1233 4.174 85.262 70.592 1.00 45.28 N
ATOM 23 C4 A B1233 5.432 84.842 70.378 1.00 45.92 C
ATOM 24 P C B1234 5.417 79.999 66.417 1.00 48.85 P
ATOM 25 OP1 C B1234 4.960 78.791 65.697 1.00 48.85 O
ATOM 26 OP2 C B1234 6.852 80.377 66.364 1.00 50.82 O
ATOM 27 O5' C B1234 4.556 81.250 65.937 1.00 46.08 O
TER
ATOM 2 P U A1241 2.140 96.537 71.260 1.00 72.26 P
ATOM 3 OP1 U A1241 1.208 97.499 71.894 1.00 73.33 O
ATOM 4 OP2 U A1241 3.543 96.444 71.738 1.00 71.99 O
ATOM 5 O5' U A1241 1.489 95.080 71.278 1.00 71.37 O
ATOM 6 C5' U A1241 0.122 94.873 70.847 1.00 68.77 C
ATOM 7 C4' U A1241 -0.251 93.411 70.943 1.00 65.29 C
ATOM 8 O4' U A1241 0.409 92.655 69.894 1.00 64.41 O
ATOM 9 C3' U A1241 0.179 92.717 72.220 1.00 64.48 C
ATOM 10 O3' U A1241 -0.685 93.002 73.314 1.00 63.72 O
ATOM 11 C2' U A1241 0.196 91.257 71.794 1.00 63.62 C
ATOM 12 O2' U A1241 -1.091 90.688 71.709 1.00 64.65 O
ATOM 13 C1' U A1241 0.774 91.374 70.384 1.00 63.12 C
ATOM 14 N1 U A1241 2.242 91.279 70.381 1.00 63.21 N
ATOM 15 C2 U A1241 2.820 90.026 70.221 1.00 63.31 C
ATOM 16 O2 U A1241 2.173 89.003 70.056 1.00 63.66 O
ATOM 17 N3 U A1241 4.190 90.015 70.258 1.00 62.89 N
ATOM 18 C4 U A1241 5.027 91.096 70.430 1.00 62.72 C
ATOM 19 O4 U A1241 6.244 90.918 70.467 1.00 64.00 O
ATOM 20 C5 U A1241 4.360 92.350 70.573 1.00 62.39 C
ATOM 21 C6 U A1241 3.028 92.400 70.544 1.00 62.50 C
ATOM 22 P G A1242 -0.083 93.052 74.808 1.00 62.70 P
ATOM 23 OP1 G A1242 -1.157 93.577 75.683 1.00 61.76 O
ATOM 24 OP2 G A1242 1.236 93.735 74.780 1.00 62.32 O
ATOM 25 O5' G A1242 0.152 91.513 75.159 1.00 60.77 O
TER
ATOM 1 O3' C B1232 10.186 79.493 71.131 1.00 47.46 O
ATOM 2 P A B1233 9.672 79.584 69.615 1.00 47.74 P
ATOM 3 OP1 A B1233 9.580 78.179 69.159 1.00 49.00 O
ATOM 4 OP2 A B1233 10.491 80.544 68.845 1.00 47.41 O
ATOM 5 O5' A B1233 8.207 80.196 69.749 1.00 45.75 O
ATOM 6 C5' A B1233 7.139 79.417 70.307 1.00 43.99 C
ATOM 7 C4' A B1233 5.835 80.172 70.234 1.00 44.52 C
ATOM 8 O4' A B1233 5.876 81.319 71.118 1.00 45.60 O
ATOM 9 C3' A B1233 5.477 80.787 68.898 1.00 45.57 C
ATOM 10 O3' A B1233 5.006 79.839 67.960 1.00 47.22 O
ATOM 11 C2' A B1233 4.441 81.828 69.300 1.00 45.90 C
ATOM 12 O2' A B1233 3.167 81.294 69.602 1.00 45.03 O
ATOM 13 C1' A B1233 5.058 82.357 70.592 1.00 45.79 C
ATOM 14 N9 A B1233 5.885 83.545 70.369 1.00 46.43 N
ATOM 15 C8 A B1233 7.235 83.623 70.109 1.00 46.36 C
ATOM 16 N7 A B1233 7.673 84.848 69.951 1.00 46.08 N
ATOM 17 C5 A B1233 6.537 85.631 70.118 1.00 46.34 C
ATOM 18 C6 A B1233 6.328 87.020 70.070 1.00 46.09 C
ATOM 19 N6 A B1233 7.292 87.907 69.820 1.00 46.43 N
ATOM 20 N1 A B1233 5.075 87.473 70.284 1.00 45.88 N
ATOM 21 C2 A B1233 4.104 86.586 70.524 1.00 45.64 C
ATOM 22 N3 A B1233 4.174 85.262 70.592 1.00 45.28 N
ATOM 23 C4 A B1233 5.432 84.842 70.378 1.00 45.92 C
ATOM 24 P C B1234 5.417 79.999 66.417 1.00 48.85 P
ATOM 25 OP1 C B1234 4.960 78.791 65.697 1.00 48.85 O
ATOM 26 OP2 C B1234 6.852 80.377 66.364 1.00 50.82 O
ATOM 27 O5' C B1234 4.556 81.250 65.937 1.00 46.08 O
TER
Atoms:
C4: (5.027,91.096,70.430)
N3: (4.190,90.015,70.258)
OP1: (1.208,97.499,71.894)
OP2: (3.543,96.444,71.738)
C2: (2.820,90.026,70.221)
C1': (0.774,91.374,70.384)
C3': (0.179,92.717,72.220)
O5': (1.489,95.080,71.278)
O4': (0.409,92.655,69.894)
C5': (0.122,94.873,70.847)
P: (2.140,96.537,71.260)
C4': (-0.251,93.411,70.943)
C2': (0.196,91.257,71.794)
O2': (-1.091,90.688,71.709)
N1: (2.242,91.279,70.381)
O4: (6.244,90.918,70.467)
O2: (2.173,89.003,70.056)
C6: (3.028,92.400,70.544)
C5: (4.360,92.350,70.573)
O3': (-0.685,93.002,73.314)
N3: (4.190,90.015,70.258)
OP1: (1.208,97.499,71.894)
OP2: (3.543,96.444,71.738)
C2: (2.820,90.026,70.221)
C1': (0.774,91.374,70.384)
C3': (0.179,92.717,72.220)
O5': (1.489,95.080,71.278)
O4': (0.409,92.655,69.894)
C5': (0.122,94.873,70.847)
P: (2.140,96.537,71.260)
C4': (-0.251,93.411,70.943)
C2': (0.196,91.257,71.794)
O2': (-1.091,90.688,71.709)
N1: (2.242,91.279,70.381)
O4: (6.244,90.918,70.467)
O2: (2.173,89.003,70.056)
C6: (3.028,92.400,70.544)
C5: (4.360,92.350,70.573)
O3': (-0.685,93.002,73.314)
OP1: (9.580,78.179,69.159)
OP2: (10.491,80.544,68.845)
C3': (5.477,80.787,68.898)
C1': (5.058,82.357,70.592)
C5': (7.139,79.417,70.307)
O4': (5.876,81.319,71.118)
C8: (7.235,83.623,70.109)
O2': (3.167,81.294,69.602)
C6: (6.328,87.020,70.070)
C5: (6.537,85.631,70.118)
C4: (5.432,84.842,70.378)
P: (9.672,79.584,69.615)
C4': (5.835,80.172,70.234)
C2': (4.441,81.828,69.300)
C2: (4.104,86.586,70.524)
N1: (5.075,87.473,70.284)
N3: (4.174,85.262,70.592)
N6: (7.292,87.907,69.820)
N7: (7.673,84.848,69.951)
N9: (5.885,83.545,70.369)
O5': (8.207,80.196,69.749)
O3': (5.006,79.839,67.960)
OP2: (10.491,80.544,68.845)
C3': (5.477,80.787,68.898)
C1': (5.058,82.357,70.592)
C5': (7.139,79.417,70.307)
O4': (5.876,81.319,71.118)
C8: (7.235,83.623,70.109)
O2': (3.167,81.294,69.602)
C6: (6.328,87.020,70.070)
C5: (6.537,85.631,70.118)
C4: (5.432,84.842,70.378)
P: (9.672,79.584,69.615)
C4': (5.835,80.172,70.234)
C2': (4.441,81.828,69.300)
C2: (4.104,86.586,70.524)
N1: (5.075,87.473,70.284)
N3: (4.174,85.262,70.592)
N6: (7.292,87.907,69.820)
N7: (7.673,84.848,69.951)
N9: (5.885,83.545,70.369)
O5': (8.207,80.196,69.749)
O3': (5.006,79.839,67.960)
Image (generated by PyMOL):