ClaRNA

Doublet info:

Details

Nucleotide types: UA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2OTJ:01306:01266

Extra

PDB:
ATOM 1 O3' U A1305 14.545 108.948 56.114 1.00 48.72 O
ATOM 2 P U A1306 15.962 108.210 56.256 1.00 49.29 P
ATOM 3 OP1 U A1306 15.773 106.936 56.975 1.00 49.50 O
ATOM 4 OP2 U A1306 16.935 109.206 56.765 1.00 49.40 O
ATOM 5 O5' U A1306 16.370 107.860 54.762 1.00 49.21 O
ATOM 6 C5' U A1306 15.649 106.886 54.019 1.00 48.62 C
ATOM 7 C4' U A1306 16.203 106.804 52.626 1.00 49.18 C
ATOM 8 O4' U A1306 16.004 108.082 51.966 1.00 49.56 O
ATOM 9 C3' U A1306 17.704 106.598 52.539 1.00 49.17 C
ATOM 10 O3' U A1306 18.104 105.255 52.702 1.00 49.16 O
ATOM 11 C2' U A1306 18.020 107.116 51.147 1.00 49.30 C
ATOM 12 O2' U A1306 17.718 106.180 50.129 1.00 49.56 O
ATOM 13 C1' U A1306 17.077 108.319 51.067 1.00 49.53 C
ATOM 14 N1 U A1306 17.743 109.569 51.453 1.00 49.13 N
ATOM 15 C2 U A1306 18.456 110.229 50.479 1.00 49.13 C
ATOM 16 O2 U A1306 18.569 109.803 49.339 1.00 47.72 O
ATOM 17 N3 U A1306 19.043 111.399 50.888 1.00 49.68 N
ATOM 18 C4 U A1306 19.005 111.951 52.150 1.00 49.83 C
ATOM 19 O4 U A1306 19.594 113.013 52.365 1.00 51.02 O
ATOM 20 C5 U A1306 18.256 111.198 53.107 1.00 49.79 C
ATOM 21 C6 U A1306 17.661 110.063 52.734 1.00 49.31 C
ATOM 22 P A A1307 19.557 104.948 53.303 1.00 51.43 P
ATOM 23 OP1 A A1307 19.677 103.492 53.572 1.00 50.86 O
ATOM 24 OP2 A A1307 19.778 105.928 54.401 1.00 49.45 O
ATOM 25 O5' A A1307 20.556 105.290 52.113 1.00 49.95 O
TER

ATOM 1 O3' U B1265 25.642 118.138 43.838 1.00 37.98 O
ATOM 2 P A B1266 24.157 118.545 43.395 1.00 40.49 P
ATOM 3 OP1 A B1266 24.250 119.168 42.037 1.00 40.31 O
ATOM 4 OP2 A B1266 23.549 119.313 44.510 1.00 38.65 O
ATOM 5 O5' A B1266 23.423 117.134 43.297 1.00 40.18 O
ATOM 6 C5' A B1266 23.901 116.136 42.385 1.00 42.39 C
ATOM 7 C4' A B1266 23.250 114.808 42.664 1.00 43.29 C
ATOM 8 O4' A B1266 23.681 114.323 43.958 1.00 43.82 O
ATOM 9 C3' A B1266 21.734 114.778 42.756 1.00 43.53 C
ATOM 10 O3' A B1266 21.126 114.759 41.463 1.00 44.15 O
ATOM 11 C2' A B1266 21.519 113.476 43.519 1.00 43.54 C
ATOM 12 O2' A B1266 21.754 112.335 42.711 1.00 43.08 O
ATOM 13 C1' A B1266 22.651 113.551 44.543 1.00 43.53 C
ATOM 14 N9 A B1266 22.259 114.203 45.788 1.00 43.55 N
ATOM 15 C8 A B1266 22.478 115.504 46.148 1.00 44.11 C
ATOM 16 N7 A B1266 22.024 115.805 47.338 1.00 44.73 N
ATOM 17 C5 A B1266 21.468 114.618 47.794 1.00 43.72 C
ATOM 18 C6 A B1266 20.837 114.268 49.002 1.00 44.15 C
ATOM 19 N6 A B1266 20.674 115.109 50.032 1.00 43.93 N
ATOM 20 N1 A B1266 20.385 113.006 49.126 1.00 43.32 N
ATOM 21 C2 A B1266 20.575 112.156 48.116 1.00 43.32 C
ATOM 22 N3 A B1266 21.167 112.358 46.946 1.00 43.90 N
ATOM 23 C4 A B1266 21.596 113.626 46.845 1.00 43.67 C
ATOM 24 P A B1267 19.732 115.527 41.215 1.00 43.86 P
ATOM 25 OP1 A B1267 19.716 115.872 39.774 1.00 44.68 O
ATOM 26 OP2 A B1267 19.558 116.604 42.221 1.00 44.43 O
ATOM 27 O5' A B1267 18.632 114.408 41.491 1.00 45.17 O
TER

Atoms:
C4: (19.005,111.951,52.150)
N3: (19.043,111.399,50.888)
OP1: (15.773,106.936,56.975)
OP2: (16.935,109.206,56.765)
C2: (18.456,110.229,50.479)
C1': (17.077,108.319,51.067)
C3': (17.704,106.598,52.539)
O5': (16.370,107.860,54.762)
O4': (16.004,108.082,51.966)
C5': (15.649,106.886,54.019)
P: (15.962,108.210,56.256)
C4': (16.203,106.804,52.626)
C2': (18.020,107.116,51.147)
O2': (17.718,106.180,50.129)
N1: (17.743,109.569,51.453)
O4: (19.594,113.013,52.365)
O2: (18.569,109.803,49.339)
C6: (17.661,110.063,52.734)
C5: (18.256,111.198,53.107)
O3': (18.104,105.255,52.702)
OP1: (24.250,119.168,42.037)
OP2: (23.549,119.313,44.510)
C3': (21.734,114.778,42.756)
C1': (22.651,113.551,44.543)
C5': (23.901,116.136,42.385)
O4': (23.681,114.323,43.958)
C8: (22.478,115.504,46.148)
O2': (21.754,112.335,42.711)
C6: (20.837,114.268,49.002)
C5: (21.468,114.618,47.794)
C4: (21.596,113.626,46.845)
P: (24.157,118.545,43.395)
C4': (23.250,114.808,42.664)
C2': (21.519,113.476,43.519)
C2: (20.575,112.156,48.116)
N1: (20.385,113.006,49.126)
N3: (21.167,112.358,46.946)
N6: (20.674,115.109,50.032)
N7: (22.024,115.805,47.338)
N9: (22.259,114.203,45.788)
O5': (23.423,117.134,43.297)
O3': (21.126,114.759,41.463)
Image (generated by PyMOL):
PyMOL image
show in jmol