ClaRNA

Doublet info:

Details

Nucleotide types: UA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1KD1:A1285:A1290

Extra

PDB:
ATOM 1 O3' G A1284 5.946 118.908 78.078 1.00 41.88 O
ATOM 2 P U A1285 6.877 117.704 78.633 1.00 42.28 P
ATOM 3 OP1 U A1285 5.940 116.775 79.307 1.00 40.87 O
ATOM 4 OP2 U A1285 8.068 118.226 79.376 1.00 40.13 O
ATOM 5 O5' U A1285 7.440 116.996 77.327 1.00 39.42 O
ATOM 6 C5' U A1285 6.590 116.323 76.415 1.00 39.21 C
ATOM 7 C4' U A1285 7.419 115.756 75.300 1.00 40.62 C
ATOM 8 O4' U A1285 8.124 116.820 74.626 1.00 40.34 O
ATOM 9 C3' U A1285 8.522 114.800 75.709 1.00 40.07 C
ATOM 10 O3' U A1285 7.974 113.520 75.817 1.00 41.17 O
ATOM 11 C2' U A1285 9.447 114.852 74.508 1.00 40.11 C
ATOM 12 O2' U A1285 8.973 114.106 73.417 1.00 38.68 O
ATOM 13 C1' U A1285 9.367 116.331 74.148 1.00 40.51 C
ATOM 14 N1 U A1285 10.444 117.097 74.787 1.00 41.97 N
ATOM 15 C2 U A1285 11.709 116.990 74.250 1.00 41.86 C
ATOM 16 O2 U A1285 11.997 116.217 73.343 1.00 41.58 O
ATOM 17 N3 U A1285 12.640 117.803 74.830 1.00 42.05 N
ATOM 18 C4 U A1285 12.457 118.654 75.886 1.00 42.64 C
ATOM 19 O4 U A1285 13.423 119.250 76.343 1.00 45.09 O
ATOM 20 C5 U A1285 11.143 118.670 76.417 1.00 42.41 C
ATOM 21 C6 U A1285 10.204 117.909 75.867 1.00 42.22 C
ATOM 22 P G A1286 8.589 112.467 76.847 1.00 43.28 P
ATOM 23 OP1 G A1286 7.743 111.270 76.655 1.00 43.40 O
ATOM 24 OP2 G A1286 8.707 113.091 78.180 1.00 43.80 O
ATOM 25 O5' G A1286 10.043 112.144 76.301 1.00 41.74 O
TER

ATOM 1 O3' A B1289 24.661 116.298 72.205 1.00 30.25 O
ATOM 2 P A B1290 24.269 117.829 72.355 1.00 34.66 P
ATOM 3 OP1 A B1290 25.385 118.639 71.842 1.00 34.56 O
ATOM 4 OP2 A B1290 23.808 117.997 73.741 1.00 34.71 O
ATOM 5 O5' A B1290 22.995 118.058 71.424 1.00 37.54 O
ATOM 6 C5' A B1290 22.879 117.420 70.142 1.00 39.78 C
ATOM 7 C4' A B1290 21.463 116.940 69.915 1.00 41.18 C
ATOM 8 O4' A B1290 20.945 116.428 71.178 1.00 41.38 O
ATOM 9 C3' A B1290 20.395 117.944 69.528 1.00 41.19 C
ATOM 10 O3' A B1290 20.428 118.315 68.142 1.00 41.18 O
ATOM 11 C2' A B1290 19.145 117.133 69.843 1.00 41.84 C
ATOM 12 O2' A B1290 18.949 116.091 68.913 1.00 44.08 O
ATOM 13 C1' A B1290 19.536 116.444 71.149 1.00 41.70 C
ATOM 14 N9 A B1290 19.020 117.169 72.311 1.00 42.49 N
ATOM 15 C8 A B1290 19.676 118.001 73.192 1.00 44.03 C
ATOM 16 N7 A B1290 18.881 118.563 74.080 1.00 43.62 N
ATOM 17 C5 A B1290 17.626 118.051 73.775 1.00 41.58 C
ATOM 18 C6 A B1290 16.358 118.268 74.334 1.00 40.27 C
ATOM 19 N6 A B1290 16.138 119.079 75.373 1.00 36.61 N
ATOM 20 N1 A B1290 15.311 117.614 73.786 1.00 40.84 N
ATOM 21 C2 A B1290 15.537 116.792 72.754 1.00 40.14 C
ATOM 22 N3 A B1290 16.681 116.503 72.142 1.00 41.03 N
ATOM 23 C4 A B1290 17.699 117.176 72.703 1.00 41.73 C
ATOM 24 P C B1291 19.548 119.574 67.624 1.00 41.38 P
ATOM 25 OP1 C B1291 19.900 119.897 66.219 1.00 41.38 O
ATOM 26 OP2 C B1291 19.588 120.641 68.635 1.00 41.50 O
ATOM 27 O5' C B1291 18.058 119.024 67.627 1.00 40.87 O
TER

Atoms:
C4: (12.457,118.654,75.886)
N3: (12.640,117.803,74.830)
OP1: (5.940,116.775,79.307)
OP2: (8.068,118.226,79.376)
C2: (11.709,116.990,74.250)
C1': (9.367,116.331,74.148)
C3': (8.522,114.800,75.709)
O5': (7.440,116.996,77.327)
O4': (8.124,116.820,74.626)
C5': (6.590,116.323,76.415)
P: (6.877,117.704,78.633)
C4': (7.419,115.756,75.300)
C2': (9.447,114.852,74.508)
O2': (8.973,114.106,73.417)
N1: (10.444,117.097,74.787)
O4: (13.423,119.250,76.343)
O2: (11.997,116.217,73.343)
C6: (10.204,117.909,75.867)
C5: (11.143,118.670,76.417)
O3': (7.974,113.520,75.817)
OP1: (25.385,118.639,71.842)
OP2: (23.808,117.997,73.741)
C3': (20.395,117.944,69.528)
C1': (19.536,116.444,71.149)
C5': (22.879,117.420,70.142)
O4': (20.945,116.428,71.178)
C8: (19.676,118.001,73.192)
O2': (18.949,116.091,68.913)
C6: (16.358,118.268,74.334)
C5: (17.626,118.051,73.775)
C4: (17.699,117.176,72.703)
P: (24.269,117.829,72.355)
C4': (21.463,116.940,69.915)
C2': (19.145,117.133,69.843)
C2: (15.537,116.792,72.754)
N1: (15.311,117.614,73.786)
N3: (16.681,116.503,72.142)
N6: (16.138,119.079,75.373)
N7: (18.881,118.563,74.080)
N9: (19.020,117.169,72.311)
O5': (22.995,118.058,71.424)
O3': (20.428,118.315,68.142)
Image (generated by PyMOL):
PyMOL image
show in jmol