Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:12607:12585
Extra
PDB:
ATOM 1 O3' U A2606 15.937 -11.039 22.581 1.00 48.26 O
ATOM 2 P U A2607 16.956 -10.542 23.732 1.00 47.64 P
ATOM 3 OP1 U A2607 18.079 -11.519 23.731 1.00 47.50 O
ATOM 4 OP2 U A2607 16.193 -10.349 24.984 1.00 47.40 O
ATOM 5 O5' U A2607 17.450 -9.142 23.175 1.00 47.71 O
ATOM 6 C5' U A2607 18.280 -9.085 22.029 1.00 47.92 C
ATOM 7 C4' U A2607 18.753 -7.692 21.783 1.00 47.92 C
ATOM 8 O4' U A2607 17.610 -6.842 21.594 1.00 48.14 O
ATOM 9 C3' U A2607 19.471 -7.059 22.927 1.00 47.49 C
ATOM 10 O3' U A2607 20.817 -7.452 22.980 1.00 47.29 O
ATOM 11 C2' U A2607 19.260 -5.575 22.682 1.00 47.60 C
ATOM 12 O2' U A2607 20.132 -5.111 21.683 1.00 47.78 O
ATOM 13 C1' U A2607 17.854 -5.567 22.113 1.00 47.97 C
ATOM 14 N1 U A2607 16.856 -5.311 23.132 1.00 47.83 N
ATOM 15 C2 U A2607 16.682 -4.017 23.550 1.00 47.76 C
ATOM 16 O2 U A2607 17.307 -3.078 23.144 1.00 47.81 O
ATOM 17 N3 U A2607 15.739 -3.849 24.494 1.00 47.64 N
ATOM 18 C4 U A2607 15.006 -4.856 25.049 1.00 47.58 C
ATOM 19 O4 U A2607 14.231 -4.543 25.930 1.00 47.47 O
ATOM 20 C5 U A2607 15.222 -6.173 24.548 1.00 47.66 C
ATOM 21 C6 U A2607 16.132 -6.366 23.607 1.00 47.79 C
ATOM 22 P G A2608 21.665 -7.231 24.304 1.00 41.71 P
ATOM 23 OP1 G A2608 23.022 -7.702 24.004 1.00 41.62 O
ATOM 24 OP2 G A2608 20.922 -7.855 25.423 1.00 41.50 O
ATOM 25 O5' G A2608 21.656 -5.645 24.418 1.00 41.69 O
TER
ATOM 1 O3' C B2584 11.760 7.038 29.908 1.00 48.25 O
ATOM 2 P A B2585 10.793 6.717 28.686 1.00 44.49 P
ATOM 3 OP1 A B2585 10.191 8.024 28.322 1.00 44.82 O
ATOM 4 OP2 A B2585 9.922 5.597 29.091 1.00 44.45 O
ATOM 5 O5' A B2585 11.755 6.233 27.533 1.00 44.57 O
ATOM 6 C5' A B2585 12.864 7.013 27.170 1.00 44.55 C
ATOM 7 C4' A B2585 13.806 6.241 26.304 1.00 44.54 C
ATOM 8 O4' A B2585 14.396 5.146 27.043 1.00 44.16 O
ATOM 9 C3' A B2585 13.189 5.532 25.139 1.00 44.90 C
ATOM 10 O3' A B2585 12.784 6.405 24.103 1.00 45.33 O
ATOM 11 C2' A B2585 14.306 4.577 24.754 1.00 44.74 C
ATOM 12 O2' A B2585 15.350 5.283 24.135 1.00 44.79 O
ATOM 13 C1' A B2585 14.805 4.160 26.118 1.00 44.25 C
ATOM 14 N9 A B2585 14.309 2.850 26.529 1.00 44.13 N
ATOM 15 C8 A B2585 13.480 2.480 27.540 1.00 43.98 C
ATOM 16 N7 A B2585 13.311 1.179 27.608 1.00 43.90 N
ATOM 17 C5 A B2585 14.126 0.676 26.600 1.00 44.01 C
ATOM 18 C6 A B2585 14.424 -0.630 26.123 1.00 44.02 C
ATOM 19 N6 A B2585 13.939 -1.758 26.630 1.00 43.91 N
ATOM 20 N1 A B2585 15.270 -0.767 25.078 1.00 44.16 N
ATOM 21 C2 A B2585 15.771 0.363 24.581 1.00 44.27 C
ATOM 22 N3 A B2585 15.559 1.626 24.932 1.00 44.28 N
ATOM 23 C4 A B2585 14.732 1.712 25.953 1.00 44.14 C
ATOM 24 P G B2586 11.941 5.815 22.861 1.00 45.29 P
ATOM 25 OP1 G B2586 11.511 6.968 22.043 1.00 45.71 O
ATOM 26 OP2 G B2586 10.906 4.878 23.394 1.00 45.25 O
ATOM 27 O5' G B2586 13.027 4.976 22.078 1.00 45.26 O
TER
ATOM 2 P U A2607 16.956 -10.542 23.732 1.00 47.64 P
ATOM 3 OP1 U A2607 18.079 -11.519 23.731 1.00 47.50 O
ATOM 4 OP2 U A2607 16.193 -10.349 24.984 1.00 47.40 O
ATOM 5 O5' U A2607 17.450 -9.142 23.175 1.00 47.71 O
ATOM 6 C5' U A2607 18.280 -9.085 22.029 1.00 47.92 C
ATOM 7 C4' U A2607 18.753 -7.692 21.783 1.00 47.92 C
ATOM 8 O4' U A2607 17.610 -6.842 21.594 1.00 48.14 O
ATOM 9 C3' U A2607 19.471 -7.059 22.927 1.00 47.49 C
ATOM 10 O3' U A2607 20.817 -7.452 22.980 1.00 47.29 O
ATOM 11 C2' U A2607 19.260 -5.575 22.682 1.00 47.60 C
ATOM 12 O2' U A2607 20.132 -5.111 21.683 1.00 47.78 O
ATOM 13 C1' U A2607 17.854 -5.567 22.113 1.00 47.97 C
ATOM 14 N1 U A2607 16.856 -5.311 23.132 1.00 47.83 N
ATOM 15 C2 U A2607 16.682 -4.017 23.550 1.00 47.76 C
ATOM 16 O2 U A2607 17.307 -3.078 23.144 1.00 47.81 O
ATOM 17 N3 U A2607 15.739 -3.849 24.494 1.00 47.64 N
ATOM 18 C4 U A2607 15.006 -4.856 25.049 1.00 47.58 C
ATOM 19 O4 U A2607 14.231 -4.543 25.930 1.00 47.47 O
ATOM 20 C5 U A2607 15.222 -6.173 24.548 1.00 47.66 C
ATOM 21 C6 U A2607 16.132 -6.366 23.607 1.00 47.79 C
ATOM 22 P G A2608 21.665 -7.231 24.304 1.00 41.71 P
ATOM 23 OP1 G A2608 23.022 -7.702 24.004 1.00 41.62 O
ATOM 24 OP2 G A2608 20.922 -7.855 25.423 1.00 41.50 O
ATOM 25 O5' G A2608 21.656 -5.645 24.418 1.00 41.69 O
TER
ATOM 1 O3' C B2584 11.760 7.038 29.908 1.00 48.25 O
ATOM 2 P A B2585 10.793 6.717 28.686 1.00 44.49 P
ATOM 3 OP1 A B2585 10.191 8.024 28.322 1.00 44.82 O
ATOM 4 OP2 A B2585 9.922 5.597 29.091 1.00 44.45 O
ATOM 5 O5' A B2585 11.755 6.233 27.533 1.00 44.57 O
ATOM 6 C5' A B2585 12.864 7.013 27.170 1.00 44.55 C
ATOM 7 C4' A B2585 13.806 6.241 26.304 1.00 44.54 C
ATOM 8 O4' A B2585 14.396 5.146 27.043 1.00 44.16 O
ATOM 9 C3' A B2585 13.189 5.532 25.139 1.00 44.90 C
ATOM 10 O3' A B2585 12.784 6.405 24.103 1.00 45.33 O
ATOM 11 C2' A B2585 14.306 4.577 24.754 1.00 44.74 C
ATOM 12 O2' A B2585 15.350 5.283 24.135 1.00 44.79 O
ATOM 13 C1' A B2585 14.805 4.160 26.118 1.00 44.25 C
ATOM 14 N9 A B2585 14.309 2.850 26.529 1.00 44.13 N
ATOM 15 C8 A B2585 13.480 2.480 27.540 1.00 43.98 C
ATOM 16 N7 A B2585 13.311 1.179 27.608 1.00 43.90 N
ATOM 17 C5 A B2585 14.126 0.676 26.600 1.00 44.01 C
ATOM 18 C6 A B2585 14.424 -0.630 26.123 1.00 44.02 C
ATOM 19 N6 A B2585 13.939 -1.758 26.630 1.00 43.91 N
ATOM 20 N1 A B2585 15.270 -0.767 25.078 1.00 44.16 N
ATOM 21 C2 A B2585 15.771 0.363 24.581 1.00 44.27 C
ATOM 22 N3 A B2585 15.559 1.626 24.932 1.00 44.28 N
ATOM 23 C4 A B2585 14.732 1.712 25.953 1.00 44.14 C
ATOM 24 P G B2586 11.941 5.815 22.861 1.00 45.29 P
ATOM 25 OP1 G B2586 11.511 6.968 22.043 1.00 45.71 O
ATOM 26 OP2 G B2586 10.906 4.878 23.394 1.00 45.25 O
ATOM 27 O5' G B2586 13.027 4.976 22.078 1.00 45.26 O
TER
Atoms:
C4: (15.006,-4.856,25.049)
N3: (15.739,-3.849,24.494)
OP1: (18.079,-11.519,23.731)
OP2: (16.193,-10.349,24.984)
C2: (16.682,-4.017,23.550)
C1': (17.854,-5.567,22.113)
C3': (19.471,-7.059,22.927)
O5': (17.450,-9.142,23.175)
O4': (17.610,-6.842,21.594)
C5': (18.280,-9.085,22.029)
P: (16.956,-10.542,23.732)
C4': (18.753,-7.692,21.783)
C2': (19.260,-5.575,22.682)
O2': (20.132,-5.111,21.683)
N1: (16.856,-5.311,23.132)
O4: (14.231,-4.543,25.930)
O2: (17.307,-3.078,23.144)
C6: (16.132,-6.366,23.607)
C5: (15.222,-6.173,24.548)
O3': (20.817,-7.452,22.980)
N3: (15.739,-3.849,24.494)
OP1: (18.079,-11.519,23.731)
OP2: (16.193,-10.349,24.984)
C2: (16.682,-4.017,23.550)
C1': (17.854,-5.567,22.113)
C3': (19.471,-7.059,22.927)
O5': (17.450,-9.142,23.175)
O4': (17.610,-6.842,21.594)
C5': (18.280,-9.085,22.029)
P: (16.956,-10.542,23.732)
C4': (18.753,-7.692,21.783)
C2': (19.260,-5.575,22.682)
O2': (20.132,-5.111,21.683)
N1: (16.856,-5.311,23.132)
O4: (14.231,-4.543,25.930)
O2: (17.307,-3.078,23.144)
C6: (16.132,-6.366,23.607)
C5: (15.222,-6.173,24.548)
O3': (20.817,-7.452,22.980)
OP1: (10.191,8.024,28.322)
OP2: (9.922,5.597,29.091)
C3': (13.189,5.532,25.139)
C1': (14.805,4.160,26.118)
C5': (12.864,7.013,27.170)
O4': (14.396,5.146,27.043)
C8: (13.480,2.480,27.540)
O2': (15.350,5.283,24.135)
C6: (14.424,-0.630,26.123)
C5: (14.126,0.676,26.600)
C4: (14.732,1.712,25.953)
P: (10.793,6.717,28.686)
C4': (13.806,6.241,26.304)
C2': (14.306,4.577,24.754)
C2: (15.771,0.363,24.581)
N1: (15.270,-0.767,25.078)
N3: (15.559,1.626,24.932)
N6: (13.939,-1.758,26.630)
N7: (13.311,1.179,27.608)
N9: (14.309,2.850,26.529)
O5': (11.755,6.233,27.533)
O3': (12.784,6.405,24.103)
OP2: (9.922,5.597,29.091)
C3': (13.189,5.532,25.139)
C1': (14.805,4.160,26.118)
C5': (12.864,7.013,27.170)
O4': (14.396,5.146,27.043)
C8: (13.480,2.480,27.540)
O2': (15.350,5.283,24.135)
C6: (14.424,-0.630,26.123)
C5: (14.126,0.676,26.600)
C4: (14.732,1.712,25.953)
P: (10.793,6.717,28.686)
C4': (13.806,6.241,26.304)
C2': (14.306,4.577,24.754)
C2: (15.771,0.363,24.581)
N1: (15.270,-0.767,25.078)
N3: (15.559,1.626,24.932)
N6: (13.939,-1.758,26.630)
N7: (13.311,1.179,27.608)
N9: (14.309,2.850,26.529)
O5': (11.755,6.233,27.533)
O3': (12.784,6.405,24.103)
Image (generated by PyMOL):