ClaRNA

Doublet info:

Details

Nucleotide types: UA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3V7E:C95:C116

Extra

PDB:
ATOM 1 O3' U A 94 43.341 -8.219 -15.181 1.00 45.66 O
ATOM 2 P U A 95 42.451 -6.881 -15.292 1.00 37.93 P
ATOM 3 OP1 U A 95 41.622 -6.902 -14.071 1.00 17.97 O
ATOM 4 OP2 U A 95 41.811 -6.855 -16.615 1.00 40.66 O
ATOM 5 O5' U A 95 43.456 -5.639 -15.257 1.00 39.75 O
ATOM 6 C5' U A 95 43.147 -4.445 -15.997 1.00 45.35 C
ATOM 7 C4' U A 95 44.371 -3.571 -16.159 1.00 40.86 C
ATOM 8 O4' U A 95 44.759 -3.032 -14.898 1.00 42.94 O
ATOM 9 C3' U A 95 45.623 -4.217 -16.749 1.00 41.86 C
ATOM 10 O3' U A 95 45.875 -3.631 -18.022 1.00 44.87 O
ATOM 11 C2' U A 95 46.786 -3.673 -15.901 1.00 44.13 C
ATOM 12 O2' U A 95 47.778 -3.008 -16.639 1.00 61.81 O
ATOM 13 C1' U A 95 46.084 -2.645 -15.026 1.00 33.87 C
ATOM 14 N1 U A 95 46.635 -2.283 -13.727 1.00 32.01 N
ATOM 15 C2 U A 95 47.664 -1.359 -13.733 1.00 38.15 C
ATOM 16 O2 U A 95 48.150 -0.906 -14.778 1.00 30.79 O
ATOM 17 N3 U A 95 48.092 -0.973 -12.485 1.00 28.89 N
ATOM 18 C4 U A 95 47.606 -1.418 -11.277 1.00 31.38 C
ATOM 19 O4 U A 95 48.065 -0.962 -10.239 1.00 38.90 O
ATOM 20 C5 U A 95 46.566 -2.388 -11.371 1.00 31.05 C
ATOM 21 C6 U A 95 46.134 -2.783 -12.564 1.00 20.93 C
ATOM 22 P C A 96 44.950 -3.946 -19.288 1.00 55.38 P
ATOM 23 OP1 C A 96 45.064 -2.775 -20.180 1.00 59.67 O
ATOM 24 OP2 C A 96 43.601 -4.394 -18.854 1.00 55.73 O
ATOM 25 O5' C A 96 45.725 -5.143 -20.000 1.00 47.21 O
TER

ATOM 1 O3' A B 115 56.442 5.909 -9.112 1.00 50.02 O
ATOM 2 P A B 116 55.242 6.956 -9.306 1.00 55.34 P
ATOM 3 OP1 A B 116 55.851 8.308 -9.321 1.00 59.14 O
ATOM 4 OP2 A B 116 54.174 6.637 -8.333 1.00 48.42 O
ATOM 5 O5' A B 116 54.708 6.649 -10.771 1.00 55.74 O
ATOM 6 C5' A B 116 55.584 6.717 -11.896 1.00 49.84 C
ATOM 7 C4' A B 116 54.935 6.072 -13.092 1.00 46.40 C
ATOM 8 O4' A B 116 54.872 4.631 -12.919 1.00 47.92 O
ATOM 9 C3' A B 116 53.483 6.450 -13.296 1.00 48.83 C
ATOM 10 O3' A B 116 53.372 7.696 -13.944 1.00 52.58 O
ATOM 11 C2' A B 116 52.998 5.314 -14.176 1.00 45.70 C
ATOM 12 O2' A B 116 53.487 5.423 -15.495 1.00 48.64 O
ATOM 13 C1' A B 116 53.684 4.130 -13.511 1.00 35.78 C
ATOM 14 N9 A B 116 52.855 3.566 -12.458 1.00 27.40 N
ATOM 15 C8 A B 116 52.793 3.934 -11.144 1.00 34.66 C
ATOM 16 N7 A B 116 51.962 3.214 -10.430 1.00 34.65 N
ATOM 17 C5 A B 116 51.433 2.315 -11.343 1.00 31.97 C
ATOM 18 C6 A B 116 50.487 1.281 -11.218 1.00 34.10 C
ATOM 19 N6 A B 116 49.878 0.962 -10.075 1.00 24.11 N
ATOM 20 N1 A B 116 50.182 0.577 -12.329 1.00 39.04 N
ATOM 21 C2 A B 116 50.781 0.903 -13.484 1.00 34.06 C
ATOM 22 N3 A B 116 51.675 1.852 -13.727 1.00 36.73 N
ATOM 23 C4 A B 116 51.968 2.528 -12.599 1.00 35.24 C
ATOM 24 P G B 117 51.958 8.440 -13.973 1.00 70.17 P
ATOM 25 OP1 G B 117 52.227 9.683 -14.741 1.00 62.82 O
ATOM 26 OP2 G B 117 51.376 8.515 -12.604 1.00 48.63 O
ATOM 27 O5' G B 117 51.045 7.458 -14.838 1.00 70.69 O
TER

Atoms:
C4: (47.606,-1.418,-11.277)
N3: (48.092,-0.973,-12.485)
OP1: (41.622,-6.902,-14.071)
OP2: (41.811,-6.855,-16.615)
C2: (47.664,-1.359,-13.733)
C1': (46.084,-2.645,-15.026)
C3': (45.623,-4.217,-16.749)
O5': (43.456,-5.639,-15.257)
O4': (44.759,-3.032,-14.898)
C5': (43.147,-4.445,-15.997)
P: (42.451,-6.881,-15.292)
C4': (44.371,-3.571,-16.159)
C2': (46.786,-3.673,-15.901)
O2': (47.778,-3.008,-16.639)
N1: (46.635,-2.283,-13.727)
O4: (48.065,-0.962,-10.239)
O2: (48.150,-0.906,-14.778)
C6: (46.134,-2.783,-12.564)
C5: (46.566,-2.388,-11.371)
O3': (45.875,-3.631,-18.022)
OP1: (55.851,8.308,-9.321)
OP2: (54.174,6.637,-8.333)
C3': (53.483,6.450,-13.296)
C1': (53.684,4.130,-13.511)
C5': (55.584,6.717,-11.896)
O4': (54.872,4.631,-12.919)
C8: (52.793,3.934,-11.144)
O2': (53.487,5.423,-15.495)
C6: (50.487,1.281,-11.218)
C5: (51.433,2.315,-11.343)
C4: (51.968,2.528,-12.599)
P: (55.242,6.956,-9.306)
C4': (54.935,6.072,-13.092)
C2': (52.998,5.314,-14.176)
C2: (50.781,0.903,-13.484)
N1: (50.182,0.577,-12.329)
N3: (51.675,1.852,-13.727)
N6: (49.878,0.962,-10.075)
N7: (51.962,3.214,-10.430)
N9: (52.855,3.566,-12.458)
O5': (54.708,6.649,-10.771)
O3': (53.372,7.696,-13.944)
Image (generated by PyMOL):
PyMOL image
show in jmol