ClaRNA

Doublet info:

Details

Nucleotide types: UA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2OIU:Q5:Q45

Extra

PDB:
ATOM 1 O3' C A 4 -13.423 -15.545 -50.337 1.00 73.72 O
ATOM 2 P U A 5 -13.318 -15.676 -51.925 1.00 75.65 P
ATOM 3 OP1 U A 5 -12.927 -17.107 -52.126 1.00 75.30 O
ATOM 4 OP2 U A 5 -12.512 -14.560 -52.489 1.00 71.88 O
ATOM 5 O5' U A 5 -14.850 -15.411 -52.366 1.00 73.72 O
ATOM 6 C5' U A 5 -15.771 -16.438 -52.654 1.00 72.44 C
ATOM 7 C4' U A 5 -17.137 -15.815 -52.806 1.00 72.88 C
ATOM 8 O4' U A 5 -17.165 -14.642 -51.976 1.00 73.86 O
ATOM 9 C3' U A 5 -17.452 -15.187 -54.153 1.00 73.55 C
ATOM 10 O3' U A 5 -17.858 -16.147 -55.093 1.00 74.44 O
ATOM 11 C2' U A 5 -18.608 -14.272 -53.800 1.00 72.84 C
ATOM 12 O2' U A 5 -19.789 -14.982 -53.497 1.00 75.02 O
ATOM 13 C1' U A 5 -18.104 -13.703 -52.497 1.00 72.05 C
ATOM 14 N1 U A 5 -17.518 -12.330 -52.639 1.00 71.31 N
ATOM 15 C2 U A 5 -18.352 -11.263 -52.937 1.00 71.36 C
ATOM 16 O2 U A 5 -19.549 -11.351 -53.116 1.00 71.37 O
ATOM 17 N3 U A 5 -17.742 -10.046 -53.034 1.00 71.00 N
ATOM 18 C4 U A 5 -16.412 -9.787 -52.856 1.00 69.84 C
ATOM 19 O4 U A 5 -16.020 -8.643 -52.992 1.00 69.80 O
ATOM 20 C5 U A 5 -15.614 -10.935 -52.539 1.00 69.61 C
ATOM 21 C6 U A 5 -16.172 -12.138 -52.439 1.00 69.26 C
ATOM 22 P C A 6 -17.006 -16.216 -56.440 1.00 76.26 P
ATOM 23 OP1 C A 6 -17.301 -17.548 -57.042 1.00 77.39 O
ATOM 24 OP2 C A 6 -15.586 -15.880 -56.152 1.00 73.62 O
ATOM 25 O5' C A 6 -17.727 -15.055 -57.301 1.00 74.48 O
TER

ATOM 1 O3' G B 44 -22.908 0.286 -56.551 1.00 99.46 O
ATOM 2 P A B 45 -23.174 0.098 -54.970 1.00100.52 P
ATOM 3 OP1 A B 45 -24.457 0.735 -54.579 1.00 99.58 O
ATOM 4 OP2 A B 45 -21.926 0.456 -54.242 1.00 99.65 O
ATOM 5 O5' A B 45 -23.451 -1.468 -54.889 1.00 97.74 O
ATOM 6 C5' A B 45 -24.583 -1.954 -55.608 1.00 94.57 C
ATOM 7 C4' A B 45 -24.853 -3.403 -55.263 1.00 92.19 C
ATOM 8 O4' A B 45 -23.859 -4.243 -55.913 1.00 91.44 O
ATOM 9 C3' A B 45 -24.695 -3.755 -53.792 1.00 90.59 C
ATOM 10 O3' A B 45 -25.812 -3.396 -52.999 1.00 91.29 O
ATOM 11 C2' A B 45 -24.520 -5.261 -53.918 1.00 89.01 C
ATOM 12 O2' A B 45 -25.704 -5.913 -54.308 1.00 86.59 O
ATOM 13 C1' A B 45 -23.490 -5.307 -55.043 1.00 87.40 C
ATOM 14 N9 A B 45 -22.073 -5.191 -54.635 1.00 86.10 N
ATOM 15 C8 A B 45 -21.304 -4.060 -54.456 1.00 85.48 C
ATOM 16 N7 A B 45 -20.061 -4.291 -54.088 1.00 84.54 N
ATOM 17 C5 A B 45 -20.020 -5.674 -54.023 1.00 84.88 C
ATOM 18 C6 A B 45 -18.990 -6.575 -53.698 1.00 85.44 C
ATOM 19 N6 A B 45 -17.765 -6.164 -53.365 1.00 84.86 N
ATOM 20 N1 A B 45 -19.270 -7.904 -53.726 1.00 85.66 N
ATOM 21 C2 A B 45 -20.504 -8.307 -54.057 1.00 85.21 C
ATOM 22 N3 A B 45 -21.553 -7.556 -54.386 1.00 84.55 N
ATOM 23 C4 A B 45 -21.241 -6.245 -54.349 1.00 85.08 C
ATOM 24 P G B 46 -25.591 -2.820 -51.509 1.00 92.67 P
ATOM 25 OP1 G B 46 -26.826 -2.115 -51.121 1.00 93.42 O
ATOM 26 OP2 G B 46 -24.309 -2.081 -51.436 1.00 92.91 O
ATOM 27 O5' G B 46 -25.501 -4.154 -50.631 1.00 91.55 O
TER

Atoms:
C4: (-16.412,-9.787,-52.856)
N3: (-17.742,-10.046,-53.034)
OP1: (-12.927,-17.107,-52.126)
OP2: (-12.512,-14.560,-52.489)
C2: (-18.352,-11.263,-52.937)
C1': (-18.104,-13.703,-52.497)
C3': (-17.452,-15.187,-54.153)
O5': (-14.850,-15.411,-52.366)
O4': (-17.165,-14.642,-51.976)
C5': (-15.771,-16.438,-52.654)
P: (-13.318,-15.676,-51.925)
C4': (-17.137,-15.815,-52.806)
C2': (-18.608,-14.272,-53.800)
O2': (-19.789,-14.982,-53.497)
N1: (-17.518,-12.330,-52.639)
O4: (-16.020,-8.643,-52.992)
O2: (-19.549,-11.351,-53.116)
C6: (-16.172,-12.138,-52.439)
C5: (-15.614,-10.935,-52.539)
O3': (-17.858,-16.147,-55.093)
OP1: (-24.457,0.735,-54.579)
OP2: (-21.926,0.456,-54.242)
C3': (-24.695,-3.755,-53.792)
C1': (-23.490,-5.307,-55.043)
C5': (-24.583,-1.954,-55.608)
O4': (-23.859,-4.243,-55.913)
C8: (-21.304,-4.060,-54.456)
O2': (-25.704,-5.913,-54.308)
C6: (-18.990,-6.575,-53.698)
C5: (-20.020,-5.674,-54.023)
C4: (-21.241,-6.245,-54.349)
P: (-23.174,0.098,-54.970)
C4': (-24.853,-3.403,-55.263)
C2': (-24.520,-5.261,-53.918)
C2: (-20.504,-8.307,-54.057)
N1: (-19.270,-7.904,-53.726)
N3: (-21.553,-7.556,-54.386)
N6: (-17.765,-6.164,-53.365)
N7: (-20.061,-4.291,-54.088)
N9: (-22.073,-5.191,-54.635)
O5': (-23.451,-1.468,-54.889)
O3': (-25.812,-3.396,-52.999)
Image (generated by PyMOL):
PyMOL image
show in jmol