Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1KD1:A2372:A2331
Extra
PDB:
ATOM 1 O3' C A2371 67.498 99.713 106.442 1.00 39.79 O
ATOM 2 P U A2372 67.123 100.107 104.938 1.00 39.78 P
ATOM 3 OP1 U A2372 67.295 98.903 104.105 1.00 41.10 O
ATOM 4 OP2 U A2372 67.834 101.359 104.579 1.00 39.84 O
ATOM 5 O5' U A2372 65.565 100.410 105.001 1.00 41.61 O
ATOM 6 C5' U A2372 64.624 99.346 105.206 1.00 41.15 C
ATOM 7 C4' U A2372 63.241 99.903 105.318 1.00 39.78 C
ATOM 8 O4' U A2372 63.220 100.910 106.355 1.00 40.52 O
ATOM 9 C3' U A2372 62.794 100.683 104.100 1.00 38.80 C
ATOM 10 O3' U A2372 62.322 99.776 103.125 1.00 37.66 O
ATOM 11 C2' U A2372 61.658 101.521 104.664 1.00 39.70 C
ATOM 12 O2' U A2372 60.475 100.753 104.782 1.00 40.97 O
ATOM 13 C1' U A2372 62.189 101.836 106.063 1.00 40.36 C
ATOM 14 N1 U A2372 62.702 103.201 106.231 1.00 39.52 N
ATOM 15 C2 U A2372 61.787 104.153 106.636 1.00 38.67 C
ATOM 16 O2 U A2372 60.610 103.896 106.813 1.00 39.47 O
ATOM 17 N3 U A2372 62.297 105.409 106.819 1.00 37.53 N
ATOM 18 C4 U A2372 63.606 105.808 106.618 1.00 37.99 C
ATOM 19 O4 U A2372 63.892 107.000 106.718 1.00 38.18 O
ATOM 20 C5 U A2372 64.497 104.762 106.188 1.00 38.45 C
ATOM 21 C6 U A2372 64.026 103.526 106.011 1.00 38.00 C
ATOM 22 P A A2373 62.520 100.111 101.589 1.00 37.95 P
ATOM 23 OP1 A A2373 62.130 98.925 100.815 1.00 37.68 O
ATOM 24 OP2 A A2373 63.881 100.685 101.440 1.00 35.46 O
ATOM 25 O5' A A2373 61.481 101.273 101.292 1.00 37.89 O
TER
ATOM 1 O3' G B2330 57.095 115.073 111.355 1.00 38.54 O
ATOM 2 P A B2331 57.068 113.829 112.366 1.00 39.14 P
ATOM 3 OP1 A B2331 56.016 114.011 113.412 1.00 35.81 O
ATOM 4 OP2 A B2331 58.459 113.536 112.772 1.00 38.86 O
ATOM 5 O5' A B2331 56.571 112.652 111.427 1.00 39.45 O
ATOM 6 C5' A B2331 55.175 112.532 111.128 1.00 37.35 C
ATOM 7 C4' A B2331 54.918 111.288 110.356 1.00 36.23 C
ATOM 8 O4' A B2331 55.738 111.273 109.168 1.00 34.75 O
ATOM 9 C3' A B2331 55.341 110.051 111.094 1.00 36.19 C
ATOM 10 O3' A B2331 54.333 109.731 112.040 1.00 38.51 O
ATOM 11 C2' A B2331 55.495 109.061 109.951 1.00 36.11 C
ATOM 12 O2' A B2331 54.235 108.668 109.429 1.00 37.71 O
ATOM 13 C1' A B2331 56.146 109.951 108.897 1.00 34.86 C
ATOM 14 N9 A B2331 57.607 109.910 108.889 1.00 35.68 N
ATOM 15 C8 A B2331 58.511 110.882 109.266 1.00 36.53 C
ATOM 16 N7 A B2331 59.763 110.548 109.064 1.00 36.35 N
ATOM 17 C5 A B2331 59.681 109.271 108.535 1.00 36.18 C
ATOM 18 C6 A B2331 60.662 108.378 108.079 1.00 36.72 C
ATOM 19 N6 A B2331 61.966 108.660 108.055 1.00 35.59 N
ATOM 20 N1 A B2331 60.252 107.178 107.624 1.00 36.83 N
ATOM 21 C2 A B2331 58.942 106.917 107.610 1.00 36.60 C
ATOM 22 N3 A B2331 57.925 107.681 107.988 1.00 35.78 N
ATOM 23 C4 A B2331 58.364 108.857 108.446 1.00 35.88 C
ATOM 24 P G B2332 54.727 108.946 113.377 1.00 41.24 P
ATOM 25 OP1 G B2332 53.498 108.874 114.223 1.00 39.43 O
ATOM 26 OP2 G B2332 55.943 109.609 113.904 1.00 39.58 O
ATOM 27 O5' G B2332 55.086 107.477 112.855 1.00 39.42 O
TER
ATOM 2 P U A2372 67.123 100.107 104.938 1.00 39.78 P
ATOM 3 OP1 U A2372 67.295 98.903 104.105 1.00 41.10 O
ATOM 4 OP2 U A2372 67.834 101.359 104.579 1.00 39.84 O
ATOM 5 O5' U A2372 65.565 100.410 105.001 1.00 41.61 O
ATOM 6 C5' U A2372 64.624 99.346 105.206 1.00 41.15 C
ATOM 7 C4' U A2372 63.241 99.903 105.318 1.00 39.78 C
ATOM 8 O4' U A2372 63.220 100.910 106.355 1.00 40.52 O
ATOM 9 C3' U A2372 62.794 100.683 104.100 1.00 38.80 C
ATOM 10 O3' U A2372 62.322 99.776 103.125 1.00 37.66 O
ATOM 11 C2' U A2372 61.658 101.521 104.664 1.00 39.70 C
ATOM 12 O2' U A2372 60.475 100.753 104.782 1.00 40.97 O
ATOM 13 C1' U A2372 62.189 101.836 106.063 1.00 40.36 C
ATOM 14 N1 U A2372 62.702 103.201 106.231 1.00 39.52 N
ATOM 15 C2 U A2372 61.787 104.153 106.636 1.00 38.67 C
ATOM 16 O2 U A2372 60.610 103.896 106.813 1.00 39.47 O
ATOM 17 N3 U A2372 62.297 105.409 106.819 1.00 37.53 N
ATOM 18 C4 U A2372 63.606 105.808 106.618 1.00 37.99 C
ATOM 19 O4 U A2372 63.892 107.000 106.718 1.00 38.18 O
ATOM 20 C5 U A2372 64.497 104.762 106.188 1.00 38.45 C
ATOM 21 C6 U A2372 64.026 103.526 106.011 1.00 38.00 C
ATOM 22 P A A2373 62.520 100.111 101.589 1.00 37.95 P
ATOM 23 OP1 A A2373 62.130 98.925 100.815 1.00 37.68 O
ATOM 24 OP2 A A2373 63.881 100.685 101.440 1.00 35.46 O
ATOM 25 O5' A A2373 61.481 101.273 101.292 1.00 37.89 O
TER
ATOM 1 O3' G B2330 57.095 115.073 111.355 1.00 38.54 O
ATOM 2 P A B2331 57.068 113.829 112.366 1.00 39.14 P
ATOM 3 OP1 A B2331 56.016 114.011 113.412 1.00 35.81 O
ATOM 4 OP2 A B2331 58.459 113.536 112.772 1.00 38.86 O
ATOM 5 O5' A B2331 56.571 112.652 111.427 1.00 39.45 O
ATOM 6 C5' A B2331 55.175 112.532 111.128 1.00 37.35 C
ATOM 7 C4' A B2331 54.918 111.288 110.356 1.00 36.23 C
ATOM 8 O4' A B2331 55.738 111.273 109.168 1.00 34.75 O
ATOM 9 C3' A B2331 55.341 110.051 111.094 1.00 36.19 C
ATOM 10 O3' A B2331 54.333 109.731 112.040 1.00 38.51 O
ATOM 11 C2' A B2331 55.495 109.061 109.951 1.00 36.11 C
ATOM 12 O2' A B2331 54.235 108.668 109.429 1.00 37.71 O
ATOM 13 C1' A B2331 56.146 109.951 108.897 1.00 34.86 C
ATOM 14 N9 A B2331 57.607 109.910 108.889 1.00 35.68 N
ATOM 15 C8 A B2331 58.511 110.882 109.266 1.00 36.53 C
ATOM 16 N7 A B2331 59.763 110.548 109.064 1.00 36.35 N
ATOM 17 C5 A B2331 59.681 109.271 108.535 1.00 36.18 C
ATOM 18 C6 A B2331 60.662 108.378 108.079 1.00 36.72 C
ATOM 19 N6 A B2331 61.966 108.660 108.055 1.00 35.59 N
ATOM 20 N1 A B2331 60.252 107.178 107.624 1.00 36.83 N
ATOM 21 C2 A B2331 58.942 106.917 107.610 1.00 36.60 C
ATOM 22 N3 A B2331 57.925 107.681 107.988 1.00 35.78 N
ATOM 23 C4 A B2331 58.364 108.857 108.446 1.00 35.88 C
ATOM 24 P G B2332 54.727 108.946 113.377 1.00 41.24 P
ATOM 25 OP1 G B2332 53.498 108.874 114.223 1.00 39.43 O
ATOM 26 OP2 G B2332 55.943 109.609 113.904 1.00 39.58 O
ATOM 27 O5' G B2332 55.086 107.477 112.855 1.00 39.42 O
TER
Atoms:
C4: (63.606,105.808,106.618)
N3: (62.297,105.409,106.819)
OP1: (67.295,98.903,104.105)
OP2: (67.834,101.359,104.579)
C2: (61.787,104.153,106.636)
C1': (62.189,101.836,106.063)
C3': (62.794,100.683,104.100)
O5': (65.565,100.410,105.001)
O4': (63.220,100.910,106.355)
C5': (64.624,99.346,105.206)
P: (67.123,100.107,104.938)
C4': (63.241,99.903,105.318)
C2': (61.658,101.521,104.664)
O2': (60.475,100.753,104.782)
N1: (62.702,103.201,106.231)
O4: (63.892,107.000,106.718)
O2: (60.610,103.896,106.813)
C6: (64.026,103.526,106.011)
C5: (64.497,104.762,106.188)
O3': (62.322,99.776,103.125)
N3: (62.297,105.409,106.819)
OP1: (67.295,98.903,104.105)
OP2: (67.834,101.359,104.579)
C2: (61.787,104.153,106.636)
C1': (62.189,101.836,106.063)
C3': (62.794,100.683,104.100)
O5': (65.565,100.410,105.001)
O4': (63.220,100.910,106.355)
C5': (64.624,99.346,105.206)
P: (67.123,100.107,104.938)
C4': (63.241,99.903,105.318)
C2': (61.658,101.521,104.664)
O2': (60.475,100.753,104.782)
N1: (62.702,103.201,106.231)
O4: (63.892,107.000,106.718)
O2: (60.610,103.896,106.813)
C6: (64.026,103.526,106.011)
C5: (64.497,104.762,106.188)
O3': (62.322,99.776,103.125)
OP1: (56.016,114.011,113.412)
OP2: (58.459,113.536,112.772)
C3': (55.341,110.051,111.094)
C1': (56.146,109.951,108.897)
C5': (55.175,112.532,111.128)
O4': (55.738,111.273,109.168)
C8: (58.511,110.882,109.266)
O2': (54.235,108.668,109.429)
C6: (60.662,108.378,108.079)
C5: (59.681,109.271,108.535)
C4: (58.364,108.857,108.446)
P: (57.068,113.829,112.366)
C4': (54.918,111.288,110.356)
C2': (55.495,109.061,109.951)
C2: (58.942,106.917,107.610)
N1: (60.252,107.178,107.624)
N3: (57.925,107.681,107.988)
N6: (61.966,108.660,108.055)
N7: (59.763,110.548,109.064)
N9: (57.607,109.910,108.889)
O5': (56.571,112.652,111.427)
O3': (54.333,109.731,112.040)
OP2: (58.459,113.536,112.772)
C3': (55.341,110.051,111.094)
C1': (56.146,109.951,108.897)
C5': (55.175,112.532,111.128)
O4': (55.738,111.273,109.168)
C8: (58.511,110.882,109.266)
O2': (54.235,108.668,109.429)
C6: (60.662,108.378,108.079)
C5: (59.681,109.271,108.535)
C4: (58.364,108.857,108.446)
P: (57.068,113.829,112.366)
C4': (54.918,111.288,110.356)
C2': (55.495,109.061,109.951)
C2: (58.942,106.917,107.610)
N1: (60.252,107.178,107.624)
N3: (57.925,107.681,107.988)
N6: (61.966,108.660,108.055)
N7: (59.763,110.548,109.064)
N9: (57.607,109.910,108.889)
O5': (56.571,112.652,111.427)
O3': (54.333,109.731,112.040)
Image (generated by PyMOL):