ClaRNA

Doublet info:

Details

Nucleotide types: UA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1CSL:B2:A9

Extra

PDB:
ATOM 1 O3' C A 1 14.538 1.276 1.593 1.00 13.75 O
ATOM 2 P U A 2 16.067 0.934 1.974 1.00 13.53 P
ATOM 3 OP1 U A 2 16.736 0.569 0.697 1.00 13.52 O
ATOM 4 OP2 U A 2 16.105 -0.019 3.116 1.00 13.57 O
ATOM 5 O5' U A 2 16.664 2.325 2.477 1.00 13.40 O
ATOM 6 C5' U A 2 16.722 3.459 1.593 1.00 13.18 C
ATOM 7 C4' U A 2 16.755 4.750 2.379 1.00 13.04 C
ATOM 8 O4' U A 2 15.550 4.873 3.179 1.00 12.99 O
ATOM 9 C3' U A 2 17.892 4.924 3.374 1.00 12.97 C
ATOM 10 O3' U A 2 19.076 5.392 2.742 1.00 12.94 O
ATOM 11 C2' U A 2 17.318 5.956 4.337 1.00 12.94 C
ATOM 12 O2' U A 2 17.396 7.265 3.807 1.00 12.97 O
ATOM 13 C1' U A 2 15.848 5.543 4.393 1.00 12.93 C
ATOM 14 N1 U A 2 15.564 4.634 5.518 1.00 12.82 N
ATOM 15 C2 U A 2 15.485 5.178 6.801 1.00 12.81 C
ATOM 16 O2 U A 2 15.660 6.363 7.037 1.00 12.75 O
ATOM 17 N3 U A 2 15.202 4.274 7.795 1.00 12.74 N
ATOM 18 C4 U A 2 15.000 2.914 7.651 1.00 12.76 C
ATOM 19 O4 U A 2 14.719 2.237 8.639 1.00 12.72 O
ATOM 20 C5 U A 2 15.111 2.431 6.310 1.00 12.77 C
ATOM 21 C6 U A 2 15.380 3.284 5.317 1.00 12.82 C
ATOM 22 P G A 3 20.516 5.042 3.379 1.00 12.90 P
ATOM 23 OP1 G A 3 21.535 5.625 2.475 1.00 12.95 O
ATOM 24 OP2 G A 3 20.573 3.603 3.728 1.00 12.92 O
ATOM 25 O5' G A 3 20.538 5.835 4.755 1.00 12.82 O
TER

ATOM 1 O3' C B 8 14.611 4.329 19.761 1.00 16.35 O
ATOM 2 P A B 9 13.297 5.073 19.199 1.00 16.56 P
ATOM 3 OP1 A B 9 12.717 5.835 20.341 1.00 16.61 O
ATOM 4 OP2 A B 9 12.459 4.081 18.475 1.00 16.56 O
ATOM 5 O5' A B 9 13.855 6.103 18.118 1.00 16.66 O
ATOM 6 C5' A B 9 14.579 7.279 18.519 1.00 16.84 C
ATOM 7 C4' A B 9 15.013 8.073 17.310 1.00 16.98 C
ATOM 8 O4' A B 9 15.917 7.272 16.499 1.00 16.97 O
ATOM 9 C3' A B 9 13.919 8.499 16.341 1.00 17.07 C
ATOM 10 O3' A B 9 13.239 9.678 16.765 1.00 17.30 O
ATOM 11 C2' A B 9 14.705 8.713 15.053 1.00 17.02 C
ATOM 12 O2' A B 9 15.391 9.951 15.055 1.00 17.04 O
ATOM 13 C1' A B 9 15.727 7.576 15.125 1.00 16.92 C
ATOM 14 N9 A B 9 15.246 6.365 14.450 1.00 16.82 N
ATOM 15 C8 A B 9 14.663 5.261 15.023 1.00 16.75 C
ATOM 16 N7 A B 9 14.319 4.336 14.161 1.00 16.69 N
ATOM 17 C5 A B 9 14.704 4.860 12.937 1.00 16.67 C
ATOM 18 C6 A B 9 14.617 4.359 11.623 1.00 16.64 C
ATOM 19 N6 A B 9 14.091 3.168 11.317 1.00 16.61 N
ATOM 20 N1 A B 9 15.092 5.132 10.626 1.00 16.63 N
ATOM 21 C2 A B 9 15.618 6.323 10.933 1.00 16.64 C
ATOM 22 N3 A B 9 15.763 6.900 12.127 1.00 16.68 N
ATOM 23 C4 A B 9 15.279 6.108 13.097 1.00 16.72 C
ATOM 24 P G B 10 11.728 9.942 16.275 1.00 17.46 P
ATOM 25 OP1 G B 10 11.277 11.200 16.928 1.00 17.48 O
ATOM 26 OP2 G B 10 10.936 8.703 16.451 1.00 17.47 O
ATOM 27 O5' G B 10 11.877 10.227 14.714 1.00 17.52 O
TER

Atoms:
C4: (15.000,2.914,7.651)
N3: (15.202,4.274,7.795)
OP1: (16.736,0.569,0.697)
OP2: (16.105,-0.019,3.116)
C2: (15.485,5.178,6.801)
C1': (15.848,5.543,4.393)
C3': (17.892,4.924,3.374)
O5': (16.664,2.325,2.477)
O4': (15.550,4.873,3.179)
C5': (16.722,3.459,1.593)
P: (16.067,0.934,1.974)
C4': (16.755,4.750,2.379)
C2': (17.318,5.956,4.337)
O2': (17.396,7.265,3.807)
N1: (15.564,4.634,5.518)
O4: (14.719,2.237,8.639)
O2: (15.660,6.363,7.037)
C6: (15.380,3.284,5.317)
C5: (15.111,2.431,6.310)
O3': (19.076,5.392,2.742)
OP1: (12.717,5.835,20.341)
OP2: (12.459,4.081,18.475)
C3': (13.919,8.499,16.341)
C1': (15.727,7.576,15.125)
C5': (14.579,7.279,18.519)
O4': (15.917,7.272,16.499)
C8: (14.663,5.261,15.023)
O2': (15.391,9.951,15.055)
C6: (14.617,4.359,11.623)
C5: (14.704,4.860,12.937)
C4: (15.279,6.108,13.097)
P: (13.297,5.073,19.199)
C4': (15.013,8.073,17.310)
C2': (14.705,8.713,15.053)
C2: (15.618,6.323,10.933)
N1: (15.092,5.132,10.626)
N3: (15.763,6.900,12.127)
N6: (14.091,3.168,11.317)
N7: (14.319,4.336,14.161)
N9: (15.246,6.365,14.450)
O5': (13.855,6.103,18.118)
O3': (13.239,9.678,16.765)
Image (generated by PyMOL):
PyMOL image
show in jmol