Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJN:0115:0117
Extra
PDB:
ATOM 1 O3' C A 114 87.498 165.189 35.946 1.00 66.94 O
ATOM 2 P U A 115 87.481 166.218 34.710 1.00 70.07 P
ATOM 3 OP1 U A 115 88.484 167.255 35.065 1.00 69.25 O
ATOM 4 OP2 U A 115 86.082 166.622 34.393 1.00 68.91 O
ATOM 5 O5' U A 115 88.013 165.348 33.485 1.00 71.57 O
ATOM 6 C5' U A 115 89.405 164.989 33.391 1.00 74.49 C
ATOM 7 C4' U A 115 89.687 164.256 32.097 1.00 75.85 C
ATOM 8 O4' U A 115 89.140 162.912 32.144 1.00 76.00 O
ATOM 9 C3' U A 115 89.094 164.834 30.819 1.00 76.59 C
ATOM 10 O3' U A 115 89.831 165.954 30.328 1.00 76.23 O
ATOM 11 C2' U A 115 89.198 163.641 29.874 1.00 76.59 C
ATOM 12 O2' U A 115 90.513 163.469 29.385 1.00 77.27 O
ATOM 13 C1' U A 115 88.880 162.475 30.817 1.00 75.44 C
ATOM 14 N1 U A 115 87.498 161.974 30.725 1.00 73.17 N
ATOM 15 C2 U A 115 87.297 160.776 30.050 1.00 71.60 C
ATOM 16 O2 U A 115 88.205 160.142 29.535 1.00 71.47 O
ATOM 17 N3 U A 115 85.993 160.351 29.997 1.00 69.40 N
ATOM 18 C4 U A 115 84.891 160.984 30.528 1.00 69.24 C
ATOM 19 O4 U A 115 83.777 160.485 30.369 1.00 67.16 O
ATOM 20 C5 U A 115 85.175 162.213 31.207 1.00 70.13 C
ATOM 21 C6 U A 115 86.436 162.656 31.282 1.00 71.83 C
TER
ATOM 1 P A B 117 84.573 156.342 20.741 1.00 91.02 P
ATOM 2 OP1 A B 117 84.663 155.697 19.397 1.00 88.58 O
ATOM 3 OP2 A B 117 83.307 157.019 21.154 1.00 89.88 O
ATOM 4 O5' A B 117 84.893 155.242 21.844 1.00 86.97 O
ATOM 5 C5' A B 117 86.095 154.449 21.766 1.00 79.54 C
ATOM 6 C4' A B 117 86.157 153.487 22.927 1.00 73.82 C
ATOM 7 O4' A B 117 86.573 154.179 24.140 1.00 70.55 O
ATOM 8 C3' A B 117 84.830 152.853 23.309 1.00 70.81 C
ATOM 9 O3' A B 117 84.287 151.922 22.351 1.00 69.01 O
ATOM 10 C2' A B 117 85.063 152.450 24.762 1.00 68.40 C
ATOM 11 O2' A B 117 85.819 151.278 24.964 1.00 67.10 O
ATOM 12 C1' A B 117 85.875 153.648 25.260 1.00 66.75 C
ATOM 13 N9 A B 117 85.050 154.713 25.836 1.00 62.78 N
ATOM 14 C8 A B 117 83.691 154.887 25.720 1.00 61.73 C
ATOM 15 N7 A B 117 83.228 155.918 26.384 1.00 61.24 N
ATOM 16 C5 A B 117 84.356 156.470 26.970 1.00 59.55 C
ATOM 17 C6 A B 117 84.531 157.579 27.815 1.00 57.71 C
ATOM 18 N6 A B 117 83.535 158.357 28.233 1.00 55.27 N
ATOM 19 N1 A B 117 85.783 157.861 28.226 1.00 58.97 N
ATOM 20 C2 A B 117 86.789 157.071 27.810 1.00 61.40 C
ATOM 21 N3 A B 117 86.750 155.996 27.019 1.00 60.85 N
ATOM 22 C4 A B 117 85.488 155.745 26.632 1.00 61.13 C
ATOM 23 P C B 118 85.115 150.620 21.883 1.00 69.06 P
ATOM 24 OP1 C B 118 86.382 150.494 22.660 1.00 69.94 O
ATOM 25 OP2 C B 118 85.182 150.670 20.403 1.00 69.25 O
ATOM 26 O5' C B 118 84.145 149.404 22.238 1.00 67.84 O
TER
ATOM 2 P U A 115 87.481 166.218 34.710 1.00 70.07 P
ATOM 3 OP1 U A 115 88.484 167.255 35.065 1.00 69.25 O
ATOM 4 OP2 U A 115 86.082 166.622 34.393 1.00 68.91 O
ATOM 5 O5' U A 115 88.013 165.348 33.485 1.00 71.57 O
ATOM 6 C5' U A 115 89.405 164.989 33.391 1.00 74.49 C
ATOM 7 C4' U A 115 89.687 164.256 32.097 1.00 75.85 C
ATOM 8 O4' U A 115 89.140 162.912 32.144 1.00 76.00 O
ATOM 9 C3' U A 115 89.094 164.834 30.819 1.00 76.59 C
ATOM 10 O3' U A 115 89.831 165.954 30.328 1.00 76.23 O
ATOM 11 C2' U A 115 89.198 163.641 29.874 1.00 76.59 C
ATOM 12 O2' U A 115 90.513 163.469 29.385 1.00 77.27 O
ATOM 13 C1' U A 115 88.880 162.475 30.817 1.00 75.44 C
ATOM 14 N1 U A 115 87.498 161.974 30.725 1.00 73.17 N
ATOM 15 C2 U A 115 87.297 160.776 30.050 1.00 71.60 C
ATOM 16 O2 U A 115 88.205 160.142 29.535 1.00 71.47 O
ATOM 17 N3 U A 115 85.993 160.351 29.997 1.00 69.40 N
ATOM 18 C4 U A 115 84.891 160.984 30.528 1.00 69.24 C
ATOM 19 O4 U A 115 83.777 160.485 30.369 1.00 67.16 O
ATOM 20 C5 U A 115 85.175 162.213 31.207 1.00 70.13 C
ATOM 21 C6 U A 115 86.436 162.656 31.282 1.00 71.83 C
TER
ATOM 1 P A B 117 84.573 156.342 20.741 1.00 91.02 P
ATOM 2 OP1 A B 117 84.663 155.697 19.397 1.00 88.58 O
ATOM 3 OP2 A B 117 83.307 157.019 21.154 1.00 89.88 O
ATOM 4 O5' A B 117 84.893 155.242 21.844 1.00 86.97 O
ATOM 5 C5' A B 117 86.095 154.449 21.766 1.00 79.54 C
ATOM 6 C4' A B 117 86.157 153.487 22.927 1.00 73.82 C
ATOM 7 O4' A B 117 86.573 154.179 24.140 1.00 70.55 O
ATOM 8 C3' A B 117 84.830 152.853 23.309 1.00 70.81 C
ATOM 9 O3' A B 117 84.287 151.922 22.351 1.00 69.01 O
ATOM 10 C2' A B 117 85.063 152.450 24.762 1.00 68.40 C
ATOM 11 O2' A B 117 85.819 151.278 24.964 1.00 67.10 O
ATOM 12 C1' A B 117 85.875 153.648 25.260 1.00 66.75 C
ATOM 13 N9 A B 117 85.050 154.713 25.836 1.00 62.78 N
ATOM 14 C8 A B 117 83.691 154.887 25.720 1.00 61.73 C
ATOM 15 N7 A B 117 83.228 155.918 26.384 1.00 61.24 N
ATOM 16 C5 A B 117 84.356 156.470 26.970 1.00 59.55 C
ATOM 17 C6 A B 117 84.531 157.579 27.815 1.00 57.71 C
ATOM 18 N6 A B 117 83.535 158.357 28.233 1.00 55.27 N
ATOM 19 N1 A B 117 85.783 157.861 28.226 1.00 58.97 N
ATOM 20 C2 A B 117 86.789 157.071 27.810 1.00 61.40 C
ATOM 21 N3 A B 117 86.750 155.996 27.019 1.00 60.85 N
ATOM 22 C4 A B 117 85.488 155.745 26.632 1.00 61.13 C
ATOM 23 P C B 118 85.115 150.620 21.883 1.00 69.06 P
ATOM 24 OP1 C B 118 86.382 150.494 22.660 1.00 69.94 O
ATOM 25 OP2 C B 118 85.182 150.670 20.403 1.00 69.25 O
ATOM 26 O5' C B 118 84.145 149.404 22.238 1.00 67.84 O
TER
Atoms:
C4: (84.891,160.984,30.528)
N3: (85.993,160.351,29.997)
OP1: (88.484,167.255,35.065)
OP2: (86.082,166.622,34.393)
C2: (87.297,160.776,30.050)
C1': (88.880,162.475,30.817)
C3': (89.094,164.834,30.819)
O5': (88.013,165.348,33.485)
O4': (89.140,162.912,32.144)
C5': (89.405,164.989,33.391)
P: (87.481,166.218,34.710)
C4': (89.687,164.256,32.097)
C2': (89.198,163.641,29.874)
O2': (90.513,163.469,29.385)
N1: (87.498,161.974,30.725)
O4: (83.777,160.485,30.369)
O2: (88.205,160.142,29.535)
C6: (86.436,162.656,31.282)
C5: (85.175,162.213,31.207)
O3': (89.831,165.954,30.328)
N3: (85.993,160.351,29.997)
OP1: (88.484,167.255,35.065)
OP2: (86.082,166.622,34.393)
C2: (87.297,160.776,30.050)
C1': (88.880,162.475,30.817)
C3': (89.094,164.834,30.819)
O5': (88.013,165.348,33.485)
O4': (89.140,162.912,32.144)
C5': (89.405,164.989,33.391)
P: (87.481,166.218,34.710)
C4': (89.687,164.256,32.097)
C2': (89.198,163.641,29.874)
O2': (90.513,163.469,29.385)
N1: (87.498,161.974,30.725)
O4: (83.777,160.485,30.369)
O2: (88.205,160.142,29.535)
C6: (86.436,162.656,31.282)
C5: (85.175,162.213,31.207)
O3': (89.831,165.954,30.328)
OP1: (84.663,155.697,19.397)
OP2: (83.307,157.019,21.154)
C3': (84.830,152.853,23.309)
C1': (85.875,153.648,25.260)
C5': (86.095,154.449,21.766)
O4': (86.573,154.179,24.140)
C8: (83.691,154.887,25.720)
O2': (85.819,151.278,24.964)
C6: (84.531,157.579,27.815)
C5: (84.356,156.470,26.970)
C4: (85.488,155.745,26.632)
P: (84.573,156.342,20.741)
C4': (86.157,153.487,22.927)
C2': (85.063,152.450,24.762)
C2: (86.789,157.071,27.810)
N1: (85.783,157.861,28.226)
N3: (86.750,155.996,27.019)
N6: (83.535,158.357,28.233)
N7: (83.228,155.918,26.384)
N9: (85.050,154.713,25.836)
O5': (84.893,155.242,21.844)
O3': (84.287,151.922,22.351)
OP2: (83.307,157.019,21.154)
C3': (84.830,152.853,23.309)
C1': (85.875,153.648,25.260)
C5': (86.095,154.449,21.766)
O4': (86.573,154.179,24.140)
C8: (83.691,154.887,25.720)
O2': (85.819,151.278,24.964)
C6: (84.531,157.579,27.815)
C5: (84.356,156.470,26.970)
C4: (85.488,155.745,26.632)
P: (84.573,156.342,20.741)
C4': (86.157,153.487,22.927)
C2': (85.063,152.450,24.762)
C2: (86.789,157.071,27.810)
N1: (85.783,157.861,28.226)
N3: (86.750,155.996,27.019)
N6: (83.535,158.357,28.233)
N7: (83.228,155.918,26.384)
N9: (85.050,154.713,25.836)
O5': (84.893,155.242,21.844)
O3': (84.287,151.922,22.351)
Image (generated by PyMOL):