ClaRNA

Doublet info:

Details

Nucleotide types: UA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YIT:02469:02476

Extra

PDB:
ATOM 1 O3' G A2468 101.917 114.121 98.916 1.00 34.60 O
ATOM 2 P U A2469 102.185 113.055 97.748 1.00 35.20 P
ATOM 3 OP1 U A2469 103.368 112.269 98.181 1.00 35.98 O
ATOM 4 OP2 U A2469 102.202 113.742 96.440 1.00 33.12 O
ATOM 5 O5' U A2469 100.903 112.113 97.789 1.00 35.52 O
ATOM 6 C5' U A2469 100.619 111.312 98.950 1.00 38.03 C
ATOM 7 C4' U A2469 99.295 110.603 98.790 1.00 39.12 C
ATOM 8 O4' U A2469 98.214 111.574 98.804 1.00 39.56 O
ATOM 9 C3' U A2469 99.089 109.859 97.485 1.00 39.72 C
ATOM 10 O3' U A2469 99.730 108.591 97.451 1.00 41.59 O
ATOM 11 C2' U A2469 97.574 109.762 97.430 1.00 40.08 C
ATOM 12 O2' U A2469 97.073 108.795 98.325 1.00 40.79 O
ATOM 13 C1' U A2469 97.181 111.151 97.928 1.00 39.95 C
ATOM 14 N1 U A2469 97.086 112.119 96.822 1.00 41.55 N
ATOM 15 C2 U A2469 95.875 112.244 96.170 1.00 41.83 C
ATOM 16 O2 U A2469 94.886 111.595 96.477 1.00 42.87 O
ATOM 17 N3 U A2469 95.865 113.157 95.142 1.00 41.59 N
ATOM 18 C4 U A2469 96.918 113.943 94.714 1.00 40.98 C
ATOM 19 O4 U A2469 96.735 114.773 93.826 1.00 42.47 O
ATOM 20 C5 U A2469 98.129 113.753 95.432 1.00 40.82 C
ATOM 21 C6 U A2469 98.174 112.876 96.436 1.00 41.91 C
ATOM 22 P C A2470 100.165 107.961 96.033 1.00 42.15 P
ATOM 23 OP1 C A2470 100.772 106.630 96.314 1.00 43.26 O
ATOM 24 OP2 C A2470 100.917 108.956 95.224 1.00 39.85 O
ATOM 25 O5' C A2470 98.779 107.738 95.293 1.00 42.48 O
TER

ATOM 1 O3' G B2475 87.314 115.734 87.351 1.00 32.93 O
ATOM 2 P A B2476 87.084 116.145 88.892 1.00 34.96 P
ATOM 3 OP1 A B2476 85.651 116.491 89.054 1.00 34.45 O
ATOM 4 OP2 A B2476 88.118 117.128 89.299 1.00 33.59 O
ATOM 5 O5' A B2476 87.381 114.807 89.703 1.00 34.23 O
ATOM 6 C5' A B2476 86.510 113.673 89.606 1.00 36.19 C
ATOM 7 C4' A B2476 86.913 112.619 90.605 1.00 36.79 C
ATOM 8 O4' A B2476 88.266 112.199 90.322 1.00 36.76 O
ATOM 9 C3' A B2476 86.936 113.064 92.058 1.00 36.76 C
ATOM 10 O3' A B2476 85.646 112.914 92.634 1.00 39.25 O
ATOM 11 C2' A B2476 87.944 112.106 92.669 1.00 36.31 C
ATOM 12 O2' A B2476 87.383 110.833 92.871 1.00 35.31 O
ATOM 13 C1' A B2476 88.964 111.991 91.537 1.00 38.52 C
ATOM 14 N9 A B2476 90.067 112.956 91.596 1.00 40.35 N
ATOM 15 C8 A B2476 90.207 114.107 90.858 1.00 40.18 C
ATOM 16 N7 A B2476 91.334 114.736 91.068 1.00 40.44 N
ATOM 17 C5 A B2476 91.975 113.962 92.020 1.00 40.71 C
ATOM 18 C6 A B2476 93.218 114.090 92.652 1.00 41.37 C
ATOM 19 N6 A B2476 94.070 115.084 92.406 1.00 39.81 N
ATOM 20 N1 A B2476 93.561 113.148 93.558 1.00 42.38 N
ATOM 21 C2 A B2476 92.699 112.152 93.805 1.00 41.35 C
ATOM 22 N3 A B2476 91.503 111.924 93.273 1.00 40.87 N
ATOM 23 C4 A B2476 91.198 112.874 92.372 1.00 40.37 C
ATOM 24 P C B2477 85.222 113.790 93.911 1.00 41.92 P
ATOM 25 OP1 C B2477 83.786 113.519 94.113 1.00 43.27 O
ATOM 26 OP2 C B2477 85.684 115.194 93.751 1.00 42.45 O
ATOM 27 O5' C B2477 86.022 113.131 95.120 1.00 44.18 O
TER

Atoms:
C4: (96.918,113.943,94.714)
N3: (95.865,113.157,95.142)
OP1: (103.368,112.269,98.181)
OP2: (102.202,113.742,96.440)
C2: (95.875,112.244,96.170)
C1': (97.181,111.151,97.928)
C3': (99.089,109.859,97.485)
O5': (100.903,112.113,97.789)
O4': (98.214,111.574,98.804)
C5': (100.619,111.312,98.950)
P: (102.185,113.055,97.748)
C4': (99.295,110.603,98.790)
C2': (97.574,109.762,97.430)
O2': (97.073,108.795,98.325)
N1: (97.086,112.119,96.822)
O4: (96.735,114.773,93.826)
O2: (94.886,111.595,96.477)
C6: (98.174,112.876,96.436)
C5: (98.129,113.753,95.432)
O3': (99.730,108.591,97.451)
OP1: (85.651,116.491,89.054)
OP2: (88.118,117.128,89.299)
C3': (86.936,113.064,92.058)
C1': (88.964,111.991,91.537)
C5': (86.510,113.673,89.606)
O4': (88.266,112.199,90.322)
C8: (90.207,114.107,90.858)
O2': (87.383,110.833,92.871)
C6: (93.218,114.090,92.652)
C5: (91.975,113.962,92.020)
C4: (91.198,112.874,92.372)
P: (87.084,116.145,88.892)
C4': (86.913,112.619,90.605)
C2': (87.944,112.106,92.669)
C2: (92.699,112.152,93.805)
N1: (93.561,113.148,93.558)
N3: (91.503,111.924,93.273)
N6: (94.070,115.084,92.406)
N7: (91.334,114.736,91.068)
N9: (90.067,112.956,91.596)
O5': (87.381,114.807,89.703)
O3': (85.646,112.914,92.634)
Image (generated by PyMOL):
PyMOL image
show in jmol